Miyakogusa Predicted Gene

Lj0g3v0125289.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0125289.2 tr|G7L0K5|G7L0K5_MEDTR Nuclear pore complex
protein Nup205 OS=Medicago truncatula GN=MTR_7g099880
PE,84.86,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF3414,Protein of unknown function DUF34,CUFF.7507.2
         (1539 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g099880.1 | nuclear pore complex Nup205-like protein | HC ...  2690   0.0  

>Medtr7g099880.1 | nuclear pore complex Nup205-like protein | HC |
            chr7:40140621-40114841 | 20130731
          Length = 1883

 Score = 2690 bits (6974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1319/1532 (86%), Positives = 1392/1532 (90%), Gaps = 14/1532 (0%)

Query: 1    MVSPKHLLSTLESVLLAPTPPTAAQRVELFHAIRSSLHSFQSLLSYPPPKPSDRSQVQSK 60
            MVSPK LLSTLES LL  +PPT +QR+E+ HAIRSSL S QSLLSYPPP  SDR+QVQSK
Sbjct: 1    MVSPKQLLSTLESALLGSSPPTPSQRIEVLHAIRSSLQSIQSLLSYPPPNSSDRAQVQSK 60

Query: 61   SIRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVSANQEWGLMGREPLEILRLAA 120
            SIRL DS  I+LDD DVQIALKLSDDLHLNEVDCVRLLVSANQEWGLMGRE LEILRLAA
Sbjct: 61   SIRLQDSTLITLDDNDVQIALKLSDDLHLNEVDCVRLLVSANQEWGLMGREQLEILRLAA 120

Query: 121  GLWYTERRDLITSLHLLLRAVVLDQGLEDDVLVDIQKYLEDLINSGLRQRLISLIKELNR 180
            GLWYTERR LITSLHLLLRAVVLDQGLEDD+L+DIQKYLED++NSGLRQRLISLIKELNR
Sbjct: 121  GLWYTERRYLITSLHLLLRAVVLDQGLEDDILLDIQKYLEDVVNSGLRQRLISLIKELNR 180

Query: 181  EEPSGFGGPQCERYIIDSRGSLVERLAVVSRERLILGHCLVLSILVVRTSPKDVKDIFSV 240
            EEPSG GGPQCERY+IDSRGSLVER AVVSRERLILGHCLVLS+L+VRTSPKDVKD+FSV
Sbjct: 181  EEPSGVGGPQCERYVIDSRGSLVERQAVVSRERLILGHCLVLSVLIVRTSPKDVKDLFSV 240

Query: 241  LKDSASEVSESIAPVKYQITFSLLFAVVIAFISDGLSTVPDKASVLSSNASFRHEFHELV 300
            LKDSASEVS+S   +K+QITFSLLFA+VIAF+SDGLSTVPDKASVLSSN SFRHEFHELV
Sbjct: 241  LKDSASEVSQSNTAIKHQITFSLLFALVIAFVSDGLSTVPDKASVLSSNTSFRHEFHELV 300

Query: 301  MAAGNDPIVEGFVGGIRLAWAVRLMLIQDGVAARETVSSGSSNEMGYLSQCLEVIFSNNN 360
            MA GNDPIVEGF GGIRLAW V LMLIQDGVAARETVSS SSNEM YLSQCLE +FSNN 
Sbjct: 301  MATGNDPIVEGFTGGIRLAWVVHLMLIQDGVAARETVSSASSNEMSYLSQCLETVFSNNV 360

Query: 361  FQFLLDKVLRTAAYQTEDEDMVYMYNAYLHKLITCFLSNPLARDKIKESKEKIMSVLSPY 420
            FQFLL+KVLRTAA+QTEDEDM+YMYNAYLHKLITCFLSNPLARDKIKESKEK+MSVLSPY
Sbjct: 361  FQFLLEKVLRTAAFQTEDEDMIYMYNAYLHKLITCFLSNPLARDKIKESKEKVMSVLSPY 420

Query: 421  RSVGTHDFAQDSNSSSLHGTEMGSIPFNSILDFVSEIYQKEPELLSGNDVLWTFVNFAGE 480
            R VG+HDFAQ+S+S S  GTE GS+PFNSILDFVSEIY KEPELL GNDVLWTFVNFAGE
Sbjct: 421  RVVGSHDFAQNSSSVSQQGTEAGSLPFNSILDFVSEIYLKEPELLLGNDVLWTFVNFAGE 480

Query: 481  DHTNFRTLVAFLNMLSTLASSQEGASKVYELLQNKSFRSIGWSTLFECLTIYDEKFKQSL 540
            DHTNF+TLVAFLNMLSTLASSQEGASKV+ELLQ K+FRSIGWSTLFECLTIYDEKFKQSL
Sbjct: 481  DHTNFQTLVAFLNMLSTLASSQEGASKVHELLQGKAFRSIGWSTLFECLTIYDEKFKQSL 540

Query: 541  QTAGAMLPEIQEGDAKALVAYLNVLKKVVENGNPIEKKNWFPDIEPLFKLLSYENVPPYL 600
            QTAGAMLPEIQEGDAKALVAYLNVLKKVVENGNPIE+KNWFPDIEPLFKLLSYENVPPYL
Sbjct: 541  QTAGAMLPEIQEGDAKALVAYLNVLKKVVENGNPIERKNWFPDIEPLFKLLSYENVPPYL 600

Query: 601  KGALRNAIATFIHVSPVLKDSIWTYLEQYDLPVVVGPDVQNTPSVGTQVYDMQFELNEIE 660
            KGALRNAIATFIHVSPVLKDSIWT+LEQYDLPVVVGP+ Q +PS+GTQVYDMQFELNEIE
Sbjct: 601  KGALRNAIATFIHVSPVLKDSIWTFLEQYDLPVVVGPEAQGSPSMGTQVYDMQFELNEIE 660

Query: 661  ARREQYPSTISFLNLINALIAEERDLTDXXXXXXXXXXXXYDHVFGPFPQRAYTDTCEKW 720
            ARREQYPSTISFLNLINALIAEERDLTD            YDHVFGP+PQRAY D CEKW
Sbjct: 661  ARREQYPSTISFLNLINALIAEERDLTDRGRRFIGIFRFIYDHVFGPYPQRAYADPCEKW 720

Query: 721  QLVGACLKHFHMILSMYDIKDEDYEGVVDQSRLSTTKESSPLQTQLPVLELMKDFMSGKT 780
            QLVGACLKHFHMIL+MYD+K+EDYEGVVDQSRLSTTKE+S LQTQLPVLEL+KDFMSGKT
Sbjct: 721  QLVGACLKHFHMILTMYDVKEEDYEGVVDQSRLSTTKETSSLQTQLPVLELLKDFMSGKT 780

Query: 781  AFRNIMSILLLGVNSIIAERSSQIYGQHLENAVQLSLEIIILVLEKDLLLSDYWRPLYQP 840
             FRNIMSILL GVNSII ERSSQIYGQ+LENAVQLSLEIIILVLEKDLLLSDYWRPLYQP
Sbjct: 781  VFRNIMSILLPGVNSIIDERSSQIYGQYLENAVQLSLEIIILVLEKDLLLSDYWRPLYQP 840

Query: 841  LDIILSHDHNQIVALLEYVRYDFQPKVQQSSIKIMSIFSSRMVGLVQLLLKSNASNSLIE 900
            LDIILSHDHNQIVALLEYVRYDFQPKVQQSSIKIMSI SSRMVGLVQLLLKSNASNSLIE
Sbjct: 841  LDIILSHDHNQIVALLEYVRYDFQPKVQQSSIKIMSILSSRMVGLVQLLLKSNASNSLIE 900

Query: 901  DYAACLELRSEESQKVE-----NNNDSGILIMQLLIDNIGRPAPNITHLLLKFDIDTPVE 955
            DYAACLE RSEESQ VE     NNND GILI+QLLIDNI RPAPNITHLLL+FD+DTPVE
Sbjct: 901  DYAACLEARSEESQNVENNNNNNNNDPGILILQLLIDNISRPAPNITHLLLRFDLDTPVE 960

Query: 956  RTVLQPKFYYSCMKVVLDILEKLSKPDVNALLHEFGFQLFYELCVDPLTCFPTMDLLSNK 1015
            RTVLQPKFYYSCMKV+LDILEKLSKPDVNALLHEFGFQL YELC+D  T  PTMDLLSNK
Sbjct: 961  RTVLQPKFYYSCMKVILDILEKLSKPDVNALLHEFGFQLLYELCIDAFTSVPTMDLLSNK 1020

Query: 1016 KYQFFVKHLDTIGIAPLPKRNSNQPLRISSLHQRAWILKLLAVELHAGDVSSSKHREACQ 1075
            KY+FFVKHLD IGIAPLPKRN+NQPLRISSLHQRAW+LKLLAVELHAGDVSSS HREACQ
Sbjct: 1021 KYRFFVKHLDAIGIAPLPKRNNNQPLRISSLHQRAWLLKLLAVELHAGDVSSSNHREACQ 1080

Query: 1076 TILSHLYGQGITEIGGGQAISQFSLQGASENAAIRTVSKSKVLELLEIIQFRCPDSTTKL 1135
            TILS+L+GQG T I G QAI  FSLQ  S N   RTVSKSKVL+LLEIIQFRCPD TTKL
Sbjct: 1081 TILSNLFGQGTTGIDGEQAIYPFSLQDNSGNGDFRTVSKSKVLDLLEIIQFRCPDPTTKL 1140

Query: 1136 SNVVAGMKYDLLPEDILGNPGNSG-NGVYYYSERGDRLIDLASFHDKLWLKYNSAYQHGS 1194
            SN  A MKY+LL EDILGNPGNSG  GVYYYSERGDRLIDLASFHDKLW          S
Sbjct: 1141 SNTTASMKYNLLAEDILGNPGNSGKGGVYYYSERGDRLIDLASFHDKLW--------QMS 1192

Query: 1195 NLGSDIELNDVRETIQQLLRWGWKYNKNLEEQAAQLHMLTAWSQIVEVSASRRLTMLEDR 1254
            NLG+++ELNDVRETIQQLLRWGWKYNKNLEEQA+QLHMLTAWSQ VEVSASRRL MLEDR
Sbjct: 1193 NLGNEVELNDVRETIQQLLRWGWKYNKNLEEQASQLHMLTAWSQSVEVSASRRLVMLEDR 1252

Query: 1255 SEILFQVXXXXXXXXXXXXXXXKMAFILSQVALTCMAKLRDERFMFPGSLSSDNITCIDL 1314
            SEILFQ+               KMAFILSQVALTCMAKLRDERFMFPG+LSSD+ITC+DL
Sbjct: 1253 SEILFQILDASLSASASPDCSLKMAFILSQVALTCMAKLRDERFMFPGNLSSDSITCLDL 1312

Query: 1315 IVVKQLSNGACLTILFKLIMAIXXXXXXXXXXXXQYALLLSYFQYCLNVVDPDVPTSVLQ 1374
            IVVKQLSNGACLTILFKLIMAI            QYALLLSYFQYCLNVVDPDVPTSVLQ
Sbjct: 1313 IVVKQLSNGACLTILFKLIMAILRNESSEALRRRQYALLLSYFQYCLNVVDPDVPTSVLQ 1372

Query: 1375 FLLLNEQDSEHIDLPKIDNEQAELARANFSTLRKEAQSILDLVVKDATHGSEPGKTIALY 1434
            FLLL+EQD+E+IDLPKID EQAELARANFSTLRKEAQSILDLV+KDATHGSE GKTI+LY
Sbjct: 1373 FLLLSEQDNEYIDLPKIDKEQAELARANFSTLRKEAQSILDLVIKDATHGSESGKTISLY 1432

Query: 1435 VLDGLICIDHERYFLSQLQSRGFLRSCFTAISSVSNQDGGLSLDSLQRACTFEAELALLL 1494
            VLD LICIDHERYFLSQLQSRGFLRSC TAIS++SNQDGGLSLDSLQRACTFEAELA+LL
Sbjct: 1433 VLDALICIDHERYFLSQLQSRGFLRSCLTAISNISNQDGGLSLDSLQRACTFEAELAVLL 1492

Query: 1495 RISHKYGKSGAQVLFSMGIFEHLASGRAINLQ 1526
            RISHKYGKSGAQVLF+MGI EHL+SGRA N Q
Sbjct: 1493 RISHKYGKSGAQVLFTMGILEHLSSGRATNSQ 1524