Miyakogusa Predicted Gene

Lj0g3v0124389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0124389.1 Non Characterized Hit- tr|K4ADQ8|K4ADQ8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si037015,39.39,1e-18,DUF4057,Domain of unknown function DUF4057;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,NODE_67298_length_1383_cov_53.085323.path3.1
         (232 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g087250.1 | HN1-like protein | HC | chr3:39556849-39552904...   359   1e-99
Medtr3g074260.3 | plant/F14D7-9 protein | HC | chr3:33555756-335...   239   2e-63
Medtr3g074260.1 | plant/F14D7-9 protein | HC | chr3:33554888-335...   239   2e-63
Medtr0276s0040.1 | DUF4057 family protein | HC | scaffold0276:14...   213   2e-55
Medtr3g074260.4 | plant/F14D7-9 protein | HC | chr3:33554897-335...   153   1e-37
Medtr3g074260.2 | plant/F14D7-9 protein | HC | chr3:33554897-335...   153   1e-37
Medtr3g036400.1 | DUF4057 family protein | HC | chr3:13519121-13...    67   1e-11
Medtr7g008860.1 | DUF4057 family protein | HC | chr7:1845117-184...    55   6e-08

>Medtr3g087250.1 | HN1-like protein | HC | chr3:39556849-39552904 |
           20130731
          Length = 299

 Score =  359 bits (922), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 182/232 (78%), Positives = 204/232 (87%), Gaps = 3/232 (1%)

Query: 1   MKEITGSGIFSANAEDSTSEAGSANSNGRTSRRLVQQAVNGISQISFSTEESVSPKKPAT 60
           MKE++G GIFS N EDS SEAGS NS  +TS R+ QQA+NG+SQISFSTEESVSPKKP +
Sbjct: 71  MKEMSGHGIFSDNGEDSASEAGSVNS--KTSIRIYQQAINGVSQISFSTEESVSPKKPTS 128

Query: 61  IPEVAKQRELSGTLQSELDSKSNKLISNAKTKELTGNDIFGPPPEIVPRSVAAARITESK 120
           IPEVAKQRELSGTLQ++LD+K+ K ISNAKTKELTGNDIFGPPPEIVPRS+AAAR  ESK
Sbjct: 129 IPEVAKQRELSGTLQTDLDAKTQKQISNAKTKELTGNDIFGPPPEIVPRSMAAARTLESK 188

Query: 121 GSKDMGEPLPRNLRTSVKVSNPAGGQSNDLFGEAPVLKTSKKIHDHKLAELTGTNIFQGN 180
            SKDMGEPLPRNLRTSVKVSNPAGGQSN LFG+APV KTSKKIHD K AEL+G NIF G+
Sbjct: 189 ESKDMGEPLPRNLRTSVKVSNPAGGQSNILFGDAPVEKTSKKIHDQKFAELSGNNIFHGD 248

Query: 181 NPPGSAEKPLSRAKLREMTGSNIFAADAKAETKDPIRGSRQPPGGESSIALL 232
            P GSAEK LSRAKLRE+TGS+IF AD K E KDP++G+R+PPGG+SSIALL
Sbjct: 249 VPAGSAEKSLSRAKLREITGSDIF-ADGKPEIKDPVKGARKPPGGDSSIALL 299


>Medtr3g074260.3 | plant/F14D7-9 protein | HC |
           chr3:33555756-33557997 | 20130731
          Length = 216

 Score =  239 bits (610), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/233 (59%), Positives = 169/233 (72%), Gaps = 18/233 (7%)

Query: 1   MKEITGSGIFSANAEDSTSEAGSAN-SNGRTSRRLVQQAVNGISQISFSTEESVSPKKPA 59
           MKEITGSGIF AN ED   E GSAN S  +T  R+ QQA+ GIS ISF  EESVSPKKPA
Sbjct: 1   MKEITGSGIFVANGEDEAPEDGSANPSANKTGIRMYQQAIAGISHISFGEEESVSPKKPA 60

Query: 60  TIPEVAKQRELSGTLQSELDSKSNKLISNAKTKELTGNDIFGPPPEIVPRSVAAARITES 119
           ++PEVAKQRELSGT++SE D+K NK +S+AK KEL+G+DIF PPPEI PR +   RI E 
Sbjct: 61  SLPEVAKQRELSGTMESE-DNKLNKQLSDAKCKELSGHDIFAPPPEIKPRPI-TPRILEL 118

Query: 120 KGSKDMGEPLPRNLRTSVKVSNPAGGQSNDLFGEAPVLKTSKKIHDHKLAELTGTNIFQG 179
           KGS  +GE             +   G  +   GE PVLKT+KKI + K AEL+G NIF+G
Sbjct: 119 KGSIGLGE-------------SHGDGDQDATTGE-PVLKTAKKILNQKFAELSGNNIFKG 164

Query: 180 NNPPGSAEKPLSRAKLREMTGSNIFAADAKAETKDPIRGSRQPPGGESSIALL 232
           ++PP +AEK LS AKLRE++GSNIF AD KAE++D + G R+PPGGESSIAL+
Sbjct: 165 DSPPLAAEKSLSGAKLREISGSNIF-ADGKAESRDYLGGVRKPPGGESSIALV 216


>Medtr3g074260.1 | plant/F14D7-9 protein | HC |
           chr3:33554888-33558038 | 20130731
          Length = 288

 Score =  239 bits (609), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/233 (59%), Positives = 169/233 (72%), Gaps = 18/233 (7%)

Query: 1   MKEITGSGIFSANAEDSTSEAGSAN-SNGRTSRRLVQQAVNGISQISFSTEESVSPKKPA 59
           MKEITGSGIF AN ED   E GSAN S  +T  R+ QQA+ GIS ISF  EESVSPKKPA
Sbjct: 73  MKEITGSGIFVANGEDEAPEDGSANPSANKTGIRMYQQAIAGISHISFGEEESVSPKKPA 132

Query: 60  TIPEVAKQRELSGTLQSELDSKSNKLISNAKTKELTGNDIFGPPPEIVPRSVAAARITES 119
           ++PEVAKQRELSGT++SE D+K NK +S+AK KEL+G+DIF PPPEI PR +   RI E 
Sbjct: 133 SLPEVAKQRELSGTMESE-DNKLNKQLSDAKCKELSGHDIFAPPPEIKPRPI-TPRILEL 190

Query: 120 KGSKDMGEPLPRNLRTSVKVSNPAGGQSNDLFGEAPVLKTSKKIHDHKLAELTGTNIFQG 179
           KGS  +GE             +   G  +   GE PVLKT+KKI + K AEL+G NIF+G
Sbjct: 191 KGSIGLGE-------------SHGDGDQDATTGE-PVLKTAKKILNQKFAELSGNNIFKG 236

Query: 180 NNPPGSAEKPLSRAKLREMTGSNIFAADAKAETKDPIRGSRQPPGGESSIALL 232
           ++PP +AEK LS AKLRE++GSNIF AD KAE++D + G R+PPGGESSIAL+
Sbjct: 237 DSPPLAAEKSLSGAKLREISGSNIF-ADGKAESRDYLGGVRKPPGGESSIALV 288


>Medtr0276s0040.1 | DUF4057 family protein | HC |
           scaffold0276:14403-17236 | 20130731
          Length = 348

 Score =  213 bits (541), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/246 (52%), Positives = 158/246 (64%), Gaps = 36/246 (14%)

Query: 1   MKEITGSGIFSANAEDSTSEAGSANSN---------------GRTSRRLVQQAVNGISQI 45
           MKE TGSGI SANAED+ S+A +ANS                  T  R+ QQA+NGISQI
Sbjct: 69  MKEATGSGIVSANAEDTASKANAANSKHSGIFSTNAEDATSEANTGIRVYQQAMNGISQI 128

Query: 46  SFST-EESVSPKKPATIPEVAKQRELSGTLQSELDSKSNKLISNAKTKELTGNDIFGPPP 104
           SF+  EE +SPKKP ++PE AKQREL GTLQ+E  + S KL+S++KTKE+ GNDIFG PP
Sbjct: 129 SFNNGEEIISPKKPTSLPEAAKQRELGGTLQNEPGTNSKKLMSSSKTKEIGGNDIFGIPP 188

Query: 105 EIVPRSVAAARITESKGSKDMGEPLPRNLRTSVKVSNPAGGQSNDLFGEAPVLKTSKKIH 164
           EIVPRS+AA    +S                  KV   AG +S  + GE    KTS+KIH
Sbjct: 189 EIVPRSLAAVHTPDS------------------KVYKAAGVRSKVVSGEESAQKTSRKIH 230

Query: 165 DHKLAELTGTNIFQGNNPPGSAEKPLSR-AKLREMTGSNIFAADAKAETKDPIRGSRQPP 223
           D K A+LTG +IF+G+  PGS EKP S  AKLREM GSNIF AD KAE +D + G+R+  
Sbjct: 231 DQKFADLTGNDIFKGDVTPGSVEKPTSMVAKLREMAGSNIF-ADGKAENRDRLLGNRKHA 289

Query: 224 GGESSI 229
           GG S+I
Sbjct: 290 GGGSNI 295


>Medtr3g074260.4 | plant/F14D7-9 protein | HC |
           chr3:33554897-33557511 | 20130731
          Length = 207

 Score =  153 bits (386), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 84/128 (65%), Positives = 98/128 (76%), Gaps = 3/128 (2%)

Query: 1   MKEITGSGIFSANAEDSTSEAGSAN-SNGRTSRRLVQQAVNGISQISFSTEESVSPKKPA 59
           MKEITGSGIF AN ED   E GSAN S  +T  R+ QQA+ GIS ISF  EESVSPKKPA
Sbjct: 73  MKEITGSGIFVANGEDEAPEDGSANPSANKTGIRMYQQAIAGISHISFGEEESVSPKKPA 132

Query: 60  TIPEVAKQRELSGTLQSELDSKSNKLISNAKTKELTGNDIFGPPPEIVPRSVAAARITES 119
           ++PEVAKQRELSGT++SE D+K NK +S+AK KEL+G+DIF PPPEI PR +   RI E 
Sbjct: 133 SLPEVAKQRELSGTMESE-DNKLNKQLSDAKCKELSGHDIFAPPPEIKPRPI-TPRILEL 190

Query: 120 KGSKDMGE 127
           KGS  +GE
Sbjct: 191 KGSIGLGE 198


>Medtr3g074260.2 | plant/F14D7-9 protein | HC |
           chr3:33554897-33557997 | 20130731
          Length = 207

 Score =  153 bits (386), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 84/128 (65%), Positives = 98/128 (76%), Gaps = 3/128 (2%)

Query: 1   MKEITGSGIFSANAEDSTSEAGSAN-SNGRTSRRLVQQAVNGISQISFSTEESVSPKKPA 59
           MKEITGSGIF AN ED   E GSAN S  +T  R+ QQA+ GIS ISF  EESVSPKKPA
Sbjct: 73  MKEITGSGIFVANGEDEAPEDGSANPSANKTGIRMYQQAIAGISHISFGEEESVSPKKPA 132

Query: 60  TIPEVAKQRELSGTLQSELDSKSNKLISNAKTKELTGNDIFGPPPEIVPRSVAAARITES 119
           ++PEVAKQRELSGT++SE D+K NK +S+AK KEL+G+DIF PPPEI PR +   RI E 
Sbjct: 133 SLPEVAKQRELSGTMESE-DNKLNKQLSDAKCKELSGHDIFAPPPEIKPRPI-TPRILEL 190

Query: 120 KGSKDMGE 127
           KGS  +GE
Sbjct: 191 KGSIGLGE 198


>Medtr3g036400.1 | DUF4057 family protein | HC |
          chr3:13519121-13518799 | 20130731
          Length = 66

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 42/62 (67%), Gaps = 1/62 (1%)

Query: 1  MKEITGSGIFSANAEDSTSEAGSAN-SNGRTSRRLVQQAVNGISQISFSTEESVSPKKPA 59
          MKEI GSGI  AN ED  S+ G AN S  +T   + QQ + GIS ISF  EESVSPKKPA
Sbjct: 1  MKEIIGSGILVANGEDEASKDGGANRSANKTGICMYQQTIAGISHISFGEEESVSPKKPA 60

Query: 60 TI 61
          ++
Sbjct: 61 SL 62


>Medtr7g008860.1 | DUF4057 family protein | HC |
          chr7:1845117-1844807 | 20130731
          Length = 62

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/57 (56%), Positives = 37/57 (64%), Gaps = 1/57 (1%)

Query: 1  MKEITGSGIFSANAEDSTSEAGSAN-SNGRTSRRLVQQAVNGISQISFSTEESVSPK 56
          MKEITGSGIF AN ED  SE GSAN S  +    + +QA+ GIS ISF  EE  + K
Sbjct: 1  MKEITGSGIFVANGEDEASEDGSANPSTNKIGICMYEQAIAGISHISFGEEECFTQK 57