Miyakogusa Predicted Gene

Lj0g3v0124329.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0124329.1 Non Characterized Hit- tr|K3ZMT6|K3ZMT6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si027906,25.74,0.000000002,coiled-coil,NULL,gene.g9480.t1.1
         (286 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g077140.1 | hypothetical protein | HC | chr1:34414731-3441...   293   2e-79

>Medtr1g077140.1 | hypothetical protein | HC |
           chr1:34414731-34413774 | 20130731
          Length = 303

 Score =  293 bits (749), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 176/301 (58%), Positives = 219/301 (72%), Gaps = 33/301 (10%)

Query: 3   AVAPLPEKPQFDRKLTEELNTLLSQSKGGVVGLAQFLDAAITTQKIALDSLVNISCIDGA 62
           AVAPLPEK +FD++LT EL+TL     GG + LAQ LDA+ITTQKI L+SLVN+S  D +
Sbjct: 19  AVAPLPEKSRFDQELTAELDTL-----GGDIELAQLLDASITTQKIVLNSLVNVSYRDDS 73

Query: 63  DRGGVEKYLEDNTELLDSCNYFLEKMEGINKYVDTLRVVAHLVDD--SKPNSVAAKRALE 120
           DRG V+KYLEDN E+LD CNYF+EK+E IN YVDTL++V HLVD+  +K N VA  RA E
Sbjct: 74  DRGDVDKYLEDNVEILDVCNYFVEKIESINNYVDTLKMVVHLVDNGSAKHNKVATIRATE 133

Query: 121 LLESCEKRCRVMGRKKKNSGSC--LKKLLRQK--YEKTDLGEIMCGSKAMALMCCSFLET 176
           LLES    C+ +  +     SC  LK LLRQ+  + +T++ EIMCGSKA+ LMC  FLE 
Sbjct: 134 LLES---SCKSVENR-----SCKGLKNLLRQRLCHRETNISEIMCGSKAVTLMCLRFLEH 185

Query: 177 GLSFESKSGLV-SVKQSQPVRSSWLRLLEEMAKQSSLLTIDE----------LQQTVTAA 225
           GLSF+SKSG++ ++K SQP  +SWLRLL E+ KQ+   ++DE          LQQT+ AA
Sbjct: 186 GLSFDSKSGILPTMKLSQPTSTSWLRLLLELTKQAE-ASVDEKKLQKRRSSLLQQTMDAA 244

Query: 226 RELKVHMKGKREKEMKSAVERLKKRCRGLEDGIEIIEGRVKDLYRSLIDVRMALLGILSQ 285
           REL+  MK   EKEM+S V+RLK+ C+ LED IE IEG+VKDLYR LIDVRM LLGILSQ
Sbjct: 245 RELRQQMKV--EKEMQSCVDRLKRNCKELEDEIEDIEGKVKDLYRCLIDVRMTLLGILSQ 302

Query: 286 A 286
           A
Sbjct: 303 A 303