Miyakogusa Predicted Gene

Lj0g3v0124219.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0124219.1 Non Characterized Hit- tr|I1KTL7|I1KTL7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,58.18,0,Ribonuclease
H-like,Ribonuclease H-like domain; DUF659,Domain of unknown function
DUF659; seg,NULL; ,CUFF.7467.1
         (263 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g039780.1 | hypothetical protein | LC | chr1:14622425-1462...    53   3e-07

>Medtr1g039780.1 | hypothetical protein | LC |
           chr1:14622425-14622060 | 20130731
          Length = 121

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 55  SGKRPISSSGASSAVPKKPNVKGPLDLLLMRDPETSLKLTKAKKQTSMNDACDKEARART 114
           +GKRP +  G+  A  K+   KGPLD+L  + PE +L      KQT+M D   K+ R   
Sbjct: 57  NGKRPRTEVGSIPAA-KQGTTKGPLDILFYKSPEVTLG---KGKQTNMKDGFSKKTRETA 112

Query: 115 IQYIARFFV 123
            QYIARFF 
Sbjct: 113 NQYIARFFT 121