Miyakogusa Predicted Gene

Lj0g3v0124089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0124089.1 Non Characterized Hit- tr|I1JWI6|I1JWI6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
GN=G,92.11,0.00000000007,Romo1,Reactive oxygen species modulator
1,CUFF.7455.1
         (38 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g017440.1 | reactive oxygen species modulator 1 | HC | chr...    68   2e-12
Medtr3g434780.1 | reactive oxygen species modulator 1 | HC | chr...    62   1e-10

>Medtr3g017440.1 | reactive oxygen species modulator 1 | HC |
          chr3:4964934-4968291 | 20130731
          Length = 71

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/38 (86%), Positives = 35/38 (92%)

Query: 1  MRLKVPGFLKIRHIGQTTLGSAAVFSLFLAAGTLIRSH 38
          +R KVPG LKIRHIGQ T+GSAAVFSLFLAAGTLIRSH
Sbjct: 34 IRYKVPGALKIRHIGQATIGSAAVFSLFLAAGTLIRSH 71


>Medtr3g434780.1 | reactive oxygen species modulator 1 | HC |
          chr3:11313150-11315850 | 20130731
          Length = 74

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/35 (82%), Positives = 32/35 (91%)

Query: 1  MRLKVPGFLKIRHIGQTTLGSAAVFSLFLAAGTLI 35
          +R KVPGFLKIRHIGQTTLGSAA+F LFL AG+LI
Sbjct: 34 IRYKVPGFLKIRHIGQTTLGSAAIFGLFLGAGSLI 68