Miyakogusa Predicted Gene
- Lj0g3v0123879.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0123879.2 Non Characterized Hit- tr|F6HG18|F6HG18_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,47.62,2e-16,seg,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL; AAA_12,NULL; TRNA-SPLICING ENDO,CUFF.7464.2
(164 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g076380.1 | P-loop nucleoside triphosphate hydrolase super... 242 1e-64
Medtr5g076440.1 | P-loop nucleoside triphosphate hydrolase super... 238 2e-63
Medtr5g076310.1 | P-loop nucleoside triphosphate hydrolase super... 226 7e-60
Medtr3g064190.1 | P-loop nucleoside triphosphate hydrolase super... 218 2e-57
Medtr5g076330.1 | P-loop nucleoside triphosphate hydrolase super... 216 8e-57
Medtr5g076300.1 | P-loop nucleoside triphosphate hydrolase super... 209 1e-54
Medtr5g076500.1 | P-loop nucleoside triphosphate hydrolase super... 185 1e-47
Medtr5g076320.1 | P-loop nucleoside triphosphate hydrolase super... 181 4e-46
Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase supe... 152 9e-38
Medtr3g064210.1 | P-loop nucleoside triphosphate hydrolase super... 145 2e-35
Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase super... 140 5e-34
Medtr5g080800.1 | AAA domain protein | LC | chr5:34606228-346008... 121 3e-28
Medtr8g020390.3 | tRNA-splicing endonuclease positive effector-l... 99 2e-21
Medtr8g020390.2 | tRNA-splicing endonuclease positive effector-l... 99 3e-21
Medtr8g020390.1 | tRNA-splicing endonuclease positive effector-l... 98 3e-21
Medtr5g053930.2 | P-loop nucleoside triphosphate hydrolase super... 90 9e-19
Medtr5g053930.1 | P-loop nucleoside triphosphate hydrolase super... 90 9e-19
Medtr1g052700.1 | P-loop nucleoside triphosphate hydrolase super... 90 1e-18
Medtr2g105760.1 | P-loop nucleoside triphosphate hydrolase super... 88 3e-18
Medtr7g092200.1 | DNA-binding protein SMUBP-2 | HC | chr7:365184... 81 4e-16
Medtr5g013820.2 | regulator of nonsense transcripts protein | HC... 80 6e-16
Medtr5g013820.1 | regulator of nonsense transcripts protein | HC... 80 8e-16
Medtr2g049990.2 | RNA helicase SDE3-like protein | HC | chr2:229... 74 4e-14
Medtr5g006890.4 | RNA helicase SDE3-like protein | HC | chr5:112... 74 5e-14
Medtr5g006890.3 | RNA helicase SDE3-like protein | HC | chr5:112... 74 5e-14
Medtr5g006890.1 | RNA helicase SDE3-like protein | HC | chr5:112... 74 9e-14
Medtr5g006890.2 | RNA helicase SDE3-like protein | HC | chr5:112... 74 9e-14
Medtr2g049990.1 | RNA helicase SDE3-like protein | HC | chr2:229... 74 9e-14
Medtr1g040155.1 | DNA-binding protein SMUBP-2 | HC | chr1:147422... 64 8e-11
Medtr7g034575.1 | DNA replication ATP-dependent helicase Dna2 | ... 50 1e-06
Medtr1g047040.1 | transmembrane protein, putative | LC | chr1:17... 47 6e-06
>Medtr5g076380.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32566132-32571914 |
20130731
Length = 885
Score = 242 bits (617), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/159 (71%), Positives = 135/159 (84%)
Query: 1 MRTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTV 60
MRT+KK+SIGIISPYN+QV+EIQ+K+K +I+VSD DFSVSVRSVDGFQGGE+D+IIISTV
Sbjct: 714 MRTKKKVSIGIISPYNAQVFEIQEKVKQYIAVSDTDFSVSVRSVDGFQGGEEDIIIISTV 773
Query: 61 RSNPSGKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTA 120
RSN SGKVGFLSNRQR NVA+TRARY LWILGNAATL++SD+VW+ VVLDAK+RDCFH A
Sbjct: 774 RSNESGKVGFLSNRQRVNVAITRARYCLWILGNAATLINSDSVWRNVVLDAKRRDCFHNA 833
Query: 121 DKDNKLARVIEDVVFXXXXXXXXXXMFKKLNLGERSSRP 159
++ KLAR I DV+F FKKL+LG +S +P
Sbjct: 834 AENKKLARAINDVLFEIKLLDGSESPFKKLSLGGKSEKP 872
>Medtr5g076440.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32616775-32612603 |
20130731
Length = 917
Score = 238 bits (606), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/168 (67%), Positives = 138/168 (82%), Gaps = 6/168 (3%)
Query: 2 RTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVR 61
RT+KK+SIGIISPYN+QVYEIQ+K+K + SVSD DFSVSVRS+DGFQGGE+D+IIISTVR
Sbjct: 726 RTQKKVSIGIISPYNAQVYEIQEKVKQYTSVSDTDFSVSVRSIDGFQGGEEDIIIISTVR 785
Query: 62 SNPSGKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTAD 121
SN SG VGFLSNRQRANVAMTRARY LWILGNA+TL +SD++W+++++DAK+RDC+H AD
Sbjct: 786 SNGSGNVGFLSNRQRANVAMTRARYCLWILGNASTLANSDSIWRKLIVDAKRRDCYHNAD 845
Query: 122 KDNKLARVIEDVVFXXXXXXXXXXMFKKLNLGER------SSRPRKAR 163
D KLARVI+DV+F FKKL+L E+ SSR RK R
Sbjct: 846 DDKKLARVIDDVLFEIELLEESESKFKKLSLCEKPEIDGSSSRSRKPR 893
>Medtr5g076310.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr5:32527815-32524102 |
20130731
Length = 860
Score = 226 bits (576), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 109/164 (66%), Positives = 129/164 (78%)
Query: 1 MRTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTV 60
MRT+KK+SIGIISPYN+QV EIQ+K+K + + DFSV+VRSVDGFQGGE+D+IIISTV
Sbjct: 692 MRTKKKVSIGIISPYNAQVNEIQEKVKQYTWDTTSDFSVNVRSVDGFQGGEEDIIIISTV 751
Query: 61 RSNPSGKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTA 120
RSN SG VGFLSNRQRANVAMTRARY LWILGNAATL++SD+VW+ VVLDAK+RDCFH A
Sbjct: 752 RSNGSGNVGFLSNRQRANVAMTRARYCLWILGNAATLINSDSVWRNVVLDAKRRDCFHNA 811
Query: 121 DKDNKLARVIEDVVFXXXXXXXXXXMFKKLNLGERSSRPRKARR 164
+D LAR I DV+F F KL+LGE+S + R
Sbjct: 812 VEDKNLARAINDVLFEIKLLEGSESPFMKLSLGEKSEASTSSSR 855
>Medtr3g064190.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:28858780-28854927 |
20130731
Length = 906
Score = 218 bits (555), Expect = 2e-57, Method: Composition-based stats.
Identities = 105/155 (67%), Positives = 125/155 (80%)
Query: 2 RTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVR 61
RTRKK+SIGIISPYN+QVYEIQ+KIK + S+SDP+FSVSVRSVDGFQGGE+D+IIISTVR
Sbjct: 716 RTRKKVSIGIISPYNAQVYEIQEKIKPNNSISDPNFSVSVRSVDGFQGGEEDIIIISTVR 775
Query: 62 SNPSGKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTAD 121
SN K+GFLSNRQRANVA+TRAR+ LWILGN TL SD++WK++VLDAK+R CFH AD
Sbjct: 776 SNEDAKIGFLSNRQRANVALTRARHCLWILGNETTLEKSDSIWKELVLDAKERGCFHNAD 835
Query: 122 KDNKLARVIEDVVFXXXXXXXXXXMFKKLNLGERS 156
+D KLA IED + FKKL+L +S
Sbjct: 836 EDKKLAEAIEDALLEIEFLDESESPFKKLSLQGKS 870
>Medtr5g076330.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32541203-32546485 |
20130731
Length = 898
Score = 216 bits (550), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 103/156 (66%), Positives = 128/156 (82%), Gaps = 1/156 (0%)
Query: 1 MRTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTV 60
+R R K+SIGIISPY +QV+EIQ+K+K ++ VSDP+FSVSVRSVDGFQGGE+D+IIISTV
Sbjct: 711 VRARNKVSIGIISPYKAQVHEIQEKVKQYM-VSDPNFSVSVRSVDGFQGGEEDIIIISTV 769
Query: 61 RSNPSGKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTA 120
RSN SGKVGFLSNRQRANVA+TRARY LWI+GNA TLV+S++VW++VV+DAK+RDCFH
Sbjct: 770 RSNLSGKVGFLSNRQRANVAITRARYCLWIVGNATTLVNSNSVWRKVVVDAKERDCFHNT 829
Query: 121 DKDNKLARVIEDVVFXXXXXXXXXXMFKKLNLGERS 156
D+D KL +VIED F F KL++ + S
Sbjct: 830 DEDKKLDQVIEDACFEFELLDESASAFNKLSIRDMS 865
>Medtr5g076300.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32517067-32511573 |
20130731
Length = 897
Score = 209 bits (532), Expect = 1e-54, Method: Composition-based stats.
Identities = 98/163 (60%), Positives = 130/163 (79%), Gaps = 1/163 (0%)
Query: 1 MRTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTV 60
+RTR K+SIGIISPY +QV+EIQ+++K ++ VS P+FS++VRSVDGFQGGE+D+IIISTV
Sbjct: 736 VRTRNKVSIGIISPYKAQVHEIQERVKQYM-VSAPNFSINVRSVDGFQGGEEDLIIISTV 794
Query: 61 RSNPSGKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTA 120
RSN GKVGFLSNRQR NVA+TRARY LWI+GNA TL++S++VW++VV+DAK+R+CFH A
Sbjct: 795 RSNFGGKVGFLSNRQRTNVAITRARYCLWIVGNATTLINSNSVWRKVVMDAKQRNCFHNA 854
Query: 121 DKDNKLARVIEDVVFXXXXXXXXXXMFKKLNLGERSSRPRKAR 163
D+D KL +VIED F F KL++ ++S +R
Sbjct: 855 DEDKKLDQVIEDACFEFELLDESESAFNKLSIRDKSETTNFSR 897
>Medtr5g076500.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32648280-32643985 |
20130731
Length = 857
Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/156 (58%), Positives = 115/156 (73%), Gaps = 17/156 (10%)
Query: 1 MRTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTV 60
MRT+KK+SIGIISPYN+QVYEIQ+K+K S+ DFSV+VRSVD
Sbjct: 711 MRTKKKVSIGIISPYNAQVYEIQEKVKQDTWDSNSDFSVNVRSVD--------------- 755
Query: 61 RSNPSGKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTA 120
+ SG VGFLSNRQRANVAMTRARY LWILGNA+TL +SD++W+++++DAK+RDC+H A
Sbjct: 756 --DGSGNVGFLSNRQRANVAMTRARYCLWILGNASTLANSDSIWRKLIIDAKRRDCYHNA 813
Query: 121 DKDNKLARVIEDVVFXXXXXXXXXXMFKKLNLGERS 156
D+D KLARVI+DV+F FKKL+L E+S
Sbjct: 814 DEDKKLARVIDDVLFEIELLEESESPFKKLSLCEKS 849
>Medtr5g076320.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr5:32534161-32530565 |
20130731
Length = 884
Score = 181 bits (458), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 83/134 (61%), Positives = 110/134 (82%), Gaps = 10/134 (7%)
Query: 1 MRTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTV 60
M+TRKK+SIGI+SPYN+QVYEIQ++I+ + V++ FSV+VRSVDGFQGGE+D+IIISTV
Sbjct: 739 MKTRKKVSIGIVSPYNAQVYEIQEEIEQYTKVANSKFSVNVRSVDGFQGGEEDIIIISTV 798
Query: 61 RSNPSGKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTA 120
R SN +R NVA+TRARY LWILGNA+TL++S +VW+ VV+DAKKRDCFH
Sbjct: 799 R----------SNGRRTNVALTRARYCLWILGNASTLINSGSVWRNVVIDAKKRDCFHNV 848
Query: 121 DKDNKLARVIEDVV 134
++D KL++ I+DV+
Sbjct: 849 EEDKKLSQAIKDVL 862
>Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | scaffold0189:14094-24465 |
20130731
Length = 2395
Score = 152 bits (385), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
Query: 3 TRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRS 62
+ + +SIG++SPY +QV+ IQ + S FSV V+++DGFQGGEQD+II+STVR+
Sbjct: 708 SNENLSIGVVSPYAAQVFAIQDMLGRRYD-SHEGFSVKVKTIDGFQGGEQDIIILSTVRT 766
Query: 63 NPSGKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTADK 122
+ S +GF+SN QR NVA+TRAR+ LWILGN TLVS + W+ +VLDAKKR CF AD+
Sbjct: 767 DCSTSLGFISNNQRTNVALTRARHCLWILGNERTLVSQENAWRYLVLDAKKRQCFFNADE 826
Query: 123 DNKLARVIED 132
D LAR I D
Sbjct: 827 DKDLARGIWD 836
>Medtr3g064210.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:28870689-28861592 |
20130731
Length = 1113
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 92/128 (71%), Gaps = 1/128 (0%)
Query: 4 RKKISIGIISPYNSQVYEIQQKIKHHISVSDPD-FSVSVRSVDGFQGGEQDVIIISTVRS 62
++ +S+G+ISPY +QV IQ + D FSV V +VDGFQGGE+DVIIISTVR
Sbjct: 796 KQTVSVGVISPYKAQVVAIQDTLDKRFGGDVNDGFSVKVSTVDGFQGGEEDVIIISTVRH 855
Query: 63 NPSGKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTADK 122
N G VGF+SN QR NV++TRARY LWI+GN TL++S ++W+ ++ DA R CFH+AD+
Sbjct: 856 NSMGVVGFISNIQRTNVSLTRARYCLWIIGNGETLMNSGSIWEVLLYDAVARGCFHSADE 915
Query: 123 DNKLARVI 130
D +L+ I
Sbjct: 916 DERLSHAI 923
>Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:12235889-12229184 |
20130731
Length = 1644
Score = 140 bits (353), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 96/129 (74%)
Query: 4 RKKISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSN 63
++K+SIGI+SPY QV +IQ+K+ S F+V+V+S+DGFQGGEQD+II+STVR+N
Sbjct: 729 KEKLSIGIVSPYAGQVLKIQEKLAMMNYSSHDGFNVNVKSIDGFQGGEQDIIILSTVRTN 788
Query: 64 PSGKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTADKD 123
+ F+S+ QR NVA+TRARY LWILGN LV+++ VW+ +V+D+K R F + D++
Sbjct: 789 YRTSLQFISSPQRTNVALTRARYCLWILGNERALVNNNNVWRALVIDSKNRGLFFSTDQN 848
Query: 124 NKLARVIED 132
++A+ + D
Sbjct: 849 PEMAKAVLD 857
>Medtr5g080800.1 | AAA domain protein | LC | chr5:34606228-34600879
| 20130731
Length = 1281
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 71/97 (73%), Gaps = 5/97 (5%)
Query: 36 DFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYSLWILGNAA 95
DF+V V+++DGFQGGEQD+II STVR++ S + QR NVA+TRAR+ LWILGN
Sbjct: 11 DFNVKVKTIDGFQGGEQDIIIFSTVRTDCSTSLD-----QRTNVALTRARHCLWILGNER 65
Query: 96 TLVSSDTVWKQVVLDAKKRDCFHTADKDNKLARVIED 132
TLVS D VWK +VLDAKKR CF AD+D L + I D
Sbjct: 66 TLVSQDNVWKALVLDAKKRQCFFNADEDEDLVKGIWD 102
>Medtr8g020390.3 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139954-7131293 | 20130731
Length = 868
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 93/158 (58%), Gaps = 8/158 (5%)
Query: 6 KISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPS 65
KIS+GII+PY Q+ +Q++ + ++ S+ + + +VD FQG E+DVII+S VR++
Sbjct: 650 KISVGIITPYKLQLKCLQREFEEVLN-SEEGKDIYINTVDAFQGQERDVIIMSCVRASTH 708
Query: 66 GKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTADKDNK 125
G VGF+++ +R NVA+TRAR +LW++GNA L+ S+ W ++ DA+ R+C+ D K
Sbjct: 709 G-VGFVADIRRMNVALTRARRALWVMGNANALIQSED-WAALIADARSRNCYMDMDSIPK 766
Query: 126 LARVIEDVVFXXXXXXXXXXMFKKLNLGERSSRPRKAR 163
V + V+ M G RS PR R
Sbjct: 767 DFLVTKGPVYTPLPGKPPSNM-----RGIRSGGPRYNR 799
>Medtr8g020390.2 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139954-7131293 | 20130731
Length = 1156
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 93/158 (58%), Gaps = 8/158 (5%)
Query: 6 KISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPS 65
KIS+GII+PY Q+ +Q++ + ++ S+ + + +VD FQG E+DVII+S VR++
Sbjct: 938 KISVGIITPYKLQLKCLQREFEEVLN-SEEGKDIYINTVDAFQGQERDVIIMSCVRASTH 996
Query: 66 GKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTADKDNK 125
G VGF+++ +R NVA+TRAR +LW++GNA L+ S+ W ++ DA+ R+C+ D K
Sbjct: 997 G-VGFVADIRRMNVALTRARRALWVMGNANALIQSED-WAALIADARSRNCYMDMDSIPK 1054
Query: 126 LARVIEDVVFXXXXXXXXXXMFKKLNLGERSSRPRKAR 163
V + V+ M G RS PR R
Sbjct: 1055 DFLVTKGPVYTPLPGKPPSNM-----RGIRSGGPRYNR 1087
>Medtr8g020390.1 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139957-7131293 | 20130731
Length = 1373
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 93/158 (58%), Gaps = 8/158 (5%)
Query: 6 KISIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPS 65
KIS+GII+PY Q+ +Q++ + ++ S+ + + +VD FQG E+DVII+S VR++
Sbjct: 1155 KISVGIITPYKLQLKCLQREFEEVLN-SEEGKDIYINTVDAFQGQERDVIIMSCVRASTH 1213
Query: 66 GKVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTADKDNK 125
G VGF+++ +R NVA+TRAR +LW++GNA L+ S+ W ++ DA+ R+C+ D K
Sbjct: 1214 G-VGFVADIRRMNVALTRARRALWVMGNANALIQSED-WAALIADARSRNCYMDMDSIPK 1271
Query: 126 LARVIEDVVFXXXXXXXXXXMFKKLNLGERSSRPRKAR 163
V + V+ M G RS PR R
Sbjct: 1272 DFLVTKGPVYTPLPGKPPSNM-----RGIRSGGPRYNR 1304
>Medtr5g053930.2 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:22211102-22194060 |
20130731
Length = 821
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 2/114 (1%)
Query: 9 IGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKV 68
+ IISPY +QV QQ+ + VS V + +VDG QG E+DV I S VR++ G +
Sbjct: 642 VAIISPYKAQVNLFQQRFEETFGVSAEKL-VDICTVDGCQGREKDVAIFSCVRASKEGGI 700
Query: 69 GFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTADK 122
GFL + +R NV +TRA+ ++ ++G+A+TL S W ++V A+KRDCF A K
Sbjct: 701 GFLDDIRRMNVGITRAKSAVLVVGSASTLRRS-VQWNKLVESAEKRDCFFKASK 753
>Medtr5g053930.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:22211102-22194060 |
20130731
Length = 821
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 2/114 (1%)
Query: 9 IGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKV 68
+ IISPY +QV QQ+ + VS V + +VDG QG E+DV I S VR++ G +
Sbjct: 642 VAIISPYKAQVNLFQQRFEETFGVSAEKL-VDICTVDGCQGREKDVAIFSCVRASKEGGI 700
Query: 69 GFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTADK 122
GFL + +R NV +TRA+ ++ ++G+A+TL S W ++V A+KRDCF A K
Sbjct: 701 GFLDDIRRMNVGITRAKSAVLVVGSASTLRRS-VQWNKLVESAEKRDCFFKASK 753
>Medtr1g052700.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr1:21642650-21636231 |
20130731
Length = 336
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Query: 9 IGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKV 68
+ IISPY+ QV +Q+ + VS V + +VDG QG E+DV I S VR++ G +
Sbjct: 196 VAIISPYSGQVNLFKQRFEETFGVSAEKL-VDICTVDGCQGREKDVAIFSCVRASKEGGI 254
Query: 69 GFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCFHTADK 122
GF+ +++R NV +TRA+ ++ ++G+A+TL S W ++V A+KRDCF A K
Sbjct: 255 GFVDDKRRMNVGITRAKSAVLVVGSASTLRRS-VQWNKLVESAEKRDCFFKASK 307
>Medtr2g105760.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr2:45654495-45634088 |
20130731
Length = 2328
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 79/124 (63%), Gaps = 17/124 (13%)
Query: 9 IGIISPYNSQVYEIQQKIKHHI---SVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPS 65
IGII+PY Q+ ++ + + +++D +F+ +VDGFQG E D++++STVR+ S
Sbjct: 1954 IGIITPYKCQLSLLRSRFLNAFGSSTIADIEFN----TVDGFQGREVDILLLSTVRAGHS 2009
Query: 66 G---------KVGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDC 116
G +GF+++ +R NVA+TRA+ SLWILGNA TL ++ W +V DAK+R+
Sbjct: 2010 GTAASEINSSSIGFVADIRRMNVALTRAKLSLWILGNARTLQTNHN-WAALVKDAKERNL 2068
Query: 117 FHTA 120
TA
Sbjct: 2069 IMTA 2072
>Medtr7g092200.1 | DNA-binding protein SMUBP-2 | HC |
chr7:36518499-36511162 | 20130731
Length = 645
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 5/100 (5%)
Query: 9 IGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKV 68
IGII+PY +QV ++ S+ D + + +VDGFQG E++ IIIS VRSN +V
Sbjct: 533 IGIITPYAAQVVLLKMLKNKENSLKD----IEISTVDGFQGREKEAIIISMVRSNSKKEV 588
Query: 69 GFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVV 108
GFLS+R+R NVA+TRAR I+ + T VSSD K+++
Sbjct: 589 GFLSDRRRMNVAVTRARRQCCIVCDTET-VSSDGFLKRLI 627
>Medtr5g013820.2 | regulator of nonsense transcripts protein | HC |
chr5:4548258-4534982 | 20130731
Length = 1275
Score = 80.5 bits (197), Expect = 6e-16, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 9 IGIISPYNSQVYEIQQKIKHHISVSDPDF-SVSVRSVDGFQGGEQDVIIISTVRSNPSGK 67
IG+I+PY Q I + + ++ + + V SVD FQG E+D II+S VRSN
Sbjct: 798 IGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 857
Query: 68 VGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCF 117
+GFL++ +R NVA+TRARY + ILGN L S +W ++ K+ +C
Sbjct: 858 IGFLNDPRRLNVALTRARYGIVILGNPKVL-SKQPLWNGLLTHYKEHECL 906
>Medtr5g013820.1 | regulator of nonsense transcripts protein | HC |
chr5:4548278-4534982 | 20130731
Length = 1253
Score = 80.1 bits (196), Expect = 8e-16, Method: Composition-based stats.
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 9 IGIISPYNSQVYEIQQKIKHHISVSDPDF-SVSVRSVDGFQGGEQDVIIISTVRSNPSGK 67
IG+I+PY Q I + + ++ + + V SVD FQG E+D II+S VRSN
Sbjct: 798 IGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQG 857
Query: 68 VGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVVLDAKKRDCF 117
+GFL++ +R NVA+TRARY + ILGN L S +W ++ K+ +C
Sbjct: 858 IGFLNDPRRLNVALTRARYGIVILGNPKVL-SKQPLWNGLLTHYKEHECL 906
>Medtr2g049990.2 | RNA helicase SDE3-like protein | HC |
chr2:22979235-22972717 | 20130731
Length = 681
Score = 74.3 bits (181), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 13/107 (12%)
Query: 9 IGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGK- 67
IGII+PY QV +I+Q ++ ++ PD V V SV+ FQG E++VII+STVRS
Sbjct: 448 IGIITPYRQQVLKIKQTLE---NLEMPD--VKVGSVEQFQGQEKEVIIVSTVRSTIKHNE 502
Query: 68 ------VGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVV 108
+GFLSN +R NVA+TRA L I+GN ++ D W Q++
Sbjct: 503 FDRIHCLGFLSNHRRFNVAITRAISLLVIIGNPH-IICKDDHWSQML 548
>Medtr5g006890.4 | RNA helicase SDE3-like protein | HC |
chr5:1125978-1129505 | 20130731
Length = 681
Score = 74.3 bits (181), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 13/107 (12%)
Query: 9 IGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGK- 67
IGII+PY QV +I+Q ++ ++ PD V V SV+ FQG E++VII+STVRS
Sbjct: 448 IGIITPYRQQVLKIKQTLE---NLEMPD--VKVGSVEQFQGQEKEVIIVSTVRSTIKHNE 502
Query: 68 ------VGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVV 108
+GFLSN +R NVA+TRA L I+GN ++ D W Q++
Sbjct: 503 FDRIHCLGFLSNHRRFNVAITRAISLLVIIGNPH-IICKDDHWSQML 548
>Medtr5g006890.3 | RNA helicase SDE3-like protein | HC |
chr5:1125978-1129505 | 20130731
Length = 681
Score = 74.3 bits (181), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 13/107 (12%)
Query: 9 IGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGK- 67
IGII+PY QV +I+Q ++ ++ PD V V SV+ FQG E++VII+STVRS
Sbjct: 448 IGIITPYRQQVLKIKQTLE---NLEMPD--VKVGSVEQFQGQEKEVIIVSTVRSTIKHNE 502
Query: 68 ------VGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVV 108
+GFLSN +R NVA+TRA L I+GN ++ D W Q++
Sbjct: 503 FDRIHCLGFLSNHRRFNVAITRAISLLVIIGNPH-IICKDDHWSQML 548
>Medtr5g006890.1 | RNA helicase SDE3-like protein | HC |
chr5:1125101-1129505 | 20130731
Length = 940
Score = 73.6 bits (179), Expect = 9e-14, Method: Composition-based stats.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 13/107 (12%)
Query: 9 IGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGK- 67
IGII+PY QV +I+Q ++ ++ PD V V SV+ FQG E++VII+STVRS
Sbjct: 707 IGIITPYRQQVLKIKQTLE---NLEMPD--VKVGSVEQFQGQEKEVIIVSTVRSTIKHNE 761
Query: 68 ------VGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVV 108
+GFLSN +R NVA+TRA L I+GN ++ D W Q++
Sbjct: 762 FDRIHCLGFLSNHRRFNVAITRAISLLVIIGNPH-IICKDDHWSQML 807
>Medtr5g006890.2 | RNA helicase SDE3-like protein | HC |
chr5:1125101-1129505 | 20130731
Length = 940
Score = 73.6 bits (179), Expect = 9e-14, Method: Composition-based stats.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 13/107 (12%)
Query: 9 IGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGK- 67
IGII+PY QV +I+Q ++ ++ PD V V SV+ FQG E++VII+STVRS
Sbjct: 707 IGIITPYRQQVLKIKQTLE---NLEMPD--VKVGSVEQFQGQEKEVIIVSTVRSTIKHNE 761
Query: 68 ------VGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVV 108
+GFLSN +R NVA+TRA L I+GN ++ D W Q++
Sbjct: 762 FDRIHCLGFLSNHRRFNVAITRAISLLVIIGNPH-IICKDDHWSQML 807
>Medtr2g049990.1 | RNA helicase SDE3-like protein | HC |
chr2:22979235-22972717 | 20130731
Length = 940
Score = 73.6 bits (179), Expect = 9e-14, Method: Composition-based stats.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 13/107 (12%)
Query: 9 IGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGK- 67
IGII+PY QV +I+Q ++ ++ PD V V SV+ FQG E++VII+STVRS
Sbjct: 707 IGIITPYRQQVLKIKQTLE---NLEMPD--VKVGSVEQFQGQEKEVIIVSTVRSTIKHNE 761
Query: 68 ------VGFLSNRQRANVAMTRARYSLWILGNAATLVSSDTVWKQVV 108
+GFLSN +R NVA+TRA L I+GN ++ D W Q++
Sbjct: 762 FDRIHCLGFLSNHRRFNVAITRAISLLVIIGNPH-IICKDDHWSQML 807
>Medtr1g040155.1 | DNA-binding protein SMUBP-2 | HC |
chr1:14742280-14736383 | 20130731
Length = 914
Score = 63.5 bits (153), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 8 SIGIISPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGK 67
+I + SPY +QV Q ++ + V ++D FQG E D +I+S VRSN G
Sbjct: 786 AIVVQSPYVAQV----QLLRDMLDGVPEAAGTEVSTIDSFQGREADAVILSMVRSNTLGA 841
Query: 68 VGFLSNRQRANVAMTRARYSLWILGNAATL 97
VGFL + +R NVA+TRAR L I+ +++T+
Sbjct: 842 VGFLGDSRRINVAITRARKHLAIVCDSSTI 871
>Medtr7g034575.1 | DNA replication ATP-dependent helicase Dna2 | HC |
chr7:13072986-13090873 | 20130731
Length = 1335
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 11/84 (13%)
Query: 13 SPYNSQVYEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRS--NPSGKVG- 69
+PYNSQ I+H ++ S+ + ++D +QG ++D I++S VRS NP+ V
Sbjct: 1206 TPYNSQA----NLIRHATCIT----SLEIHTIDKYQGRDKDCILVSFVRSCENPTSCVAS 1257
Query: 70 FLSNRQRANVAMTRARYSLWILGN 93
L + R NVA+TRA+ L ++G+
Sbjct: 1258 LLGDWHRINVALTRAKRKLIMVGS 1281
>Medtr1g047040.1 | transmembrane protein, putative | LC |
chr1:17737607-17737025 | 20130731
Length = 79
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 92 GNAATLVSSDTVWKQVVLDAKKRDCFHTADKDNKLAR 128
GNA TL++SD V + VVLDAK+R CFH +++ LAR
Sbjct: 17 GNADTLINSDFVLRNVVLDAKRRGCFHNDEEEKNLAR 53