Miyakogusa Predicted Gene
- Lj0g3v0123879.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0123879.1 Non Characterized Hit- tr|F6HG18|F6HG18_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.94,0.000000000000002,P-loop containing nucleoside triphosphate
hydrolases,NULL; AAA_12,NULL; SUBFAMILY NOT NAMED,NULL; DN,CUFF.7464.1
(190 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g076440.1 | P-loop nucleoside triphosphate hydrolase super... 291 2e-79
Medtr5g076380.1 | P-loop nucleoside triphosphate hydrolase super... 290 6e-79
Medtr3g064190.1 | P-loop nucleoside triphosphate hydrolase super... 283 7e-77
Medtr5g076330.1 | P-loop nucleoside triphosphate hydrolase super... 271 3e-73
Medtr5g076310.1 | P-loop nucleoside triphosphate hydrolase super... 270 8e-73
Medtr5g076300.1 | P-loop nucleoside triphosphate hydrolase super... 256 7e-69
Medtr5g076320.1 | P-loop nucleoside triphosphate hydrolase super... 249 1e-66
Medtr5g076500.1 | P-loop nucleoside triphosphate hydrolase super... 243 8e-65
Medtr3g064210.1 | P-loop nucleoside triphosphate hydrolase super... 189 1e-48
Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase super... 179 2e-45
Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase supe... 171 4e-43
Medtr2g105760.1 | P-loop nucleoside triphosphate hydrolase super... 103 7e-23
Medtr1g052700.1 | P-loop nucleoside triphosphate hydrolase super... 102 2e-22
Medtr5g053930.2 | P-loop nucleoside triphosphate hydrolase super... 101 4e-22
Medtr5g053930.1 | P-loop nucleoside triphosphate hydrolase super... 101 4e-22
Medtr8g020390.3 | tRNA-splicing endonuclease positive effector-l... 99 2e-21
Medtr8g020390.2 | tRNA-splicing endonuclease positive effector-l... 95 3e-20
Medtr8g020390.1 | tRNA-splicing endonuclease positive effector-l... 94 7e-20
Medtr5g013820.2 | regulator of nonsense transcripts protein | HC... 93 1e-19
Medtr5g013820.1 | regulator of nonsense transcripts protein | HC... 93 2e-19
Medtr7g092200.1 | DNA-binding protein SMUBP-2 | HC | chr7:365184... 85 4e-17
Medtr5g006890.4 | RNA helicase SDE3-like protein | HC | chr5:112... 80 1e-15
Medtr5g006890.3 | RNA helicase SDE3-like protein | HC | chr5:112... 80 1e-15
Medtr2g049990.2 | RNA helicase SDE3-like protein | HC | chr2:229... 80 1e-15
Medtr5g006890.1 | RNA helicase SDE3-like protein | HC | chr5:112... 80 1e-15
Medtr5g006890.2 | RNA helicase SDE3-like protein | HC | chr5:112... 80 1e-15
Medtr2g049990.1 | RNA helicase SDE3-like protein | HC | chr2:229... 80 1e-15
Medtr1g040155.1 | DNA-binding protein SMUBP-2 | HC | chr1:147422... 70 9e-13
Medtr5g080800.1 | AAA domain protein | LC | chr5:34606228-346008... 65 5e-11
Medtr7g034575.1 | DNA replication ATP-dependent helicase Dna2 | ... 52 2e-07
>Medtr5g076440.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32616775-32612603 |
20130731
Length = 917
Score = 291 bits (746), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 137/176 (77%), Positives = 159/176 (90%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQ 60
MLNVQYRMHP+IS+FPCKEFYDE+++DAP VK SY +SFLEGEM+ SYSFI+IAKGKE+
Sbjct: 638 MLNVQYRMHPAISMFPCKEFYDEQISDAPVVKDASYKKSFLEGEMYASYSFINIAKGKEK 697
Query: 61 FGREHSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVS 120
GR HSLKN VE AVISE+I +LKKEF RT+KK+SIGIISPYN+QVYEIQ+K+K + SVS
Sbjct: 698 SGRGHSLKNMVEVAVISEMINNLKKEFKRTQKKVSIGIISPYNAQVYEIQEKVKQYTSVS 757
Query: 121 DPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIF 176
D DFSVSVRS+DGFQGGE+D+IIISTVRSN SG VGFLSNRQRANVAMTRARY ++
Sbjct: 758 DTDFSVSVRSIDGFQGGEEDIIIISTVRSNGSGNVGFLSNRQRANVAMTRARYCLW 813
>Medtr5g076380.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32566132-32571914 |
20130731
Length = 885
Score = 290 bits (742), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 137/176 (77%), Positives = 159/176 (90%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQ 60
MLNVQYRMHPSISLFPCKEFYD K++DA V E YN+ FLEG+M+ SYSFI+IAKGKEQ
Sbjct: 627 MLNVQYRMHPSISLFPCKEFYDGKISDAVIVGKEKYNKHFLEGKMYASYSFINIAKGKEQ 686
Query: 61 FGREHSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVS 120
FGRE+SLKN VE AVIS+I+ SLK EFMRT+KK+SIGIISPYN+QV+EIQ+K+K +I+VS
Sbjct: 687 FGRENSLKNMVEVAVISKILESLKHEFMRTKKKVSIGIISPYNAQVFEIQEKVKQYIAVS 746
Query: 121 DPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIF 176
D DFSVSVRSVDGFQGGE+D+IIISTVRSN SGKVGFLSNRQR NVA+TRARY ++
Sbjct: 747 DTDFSVSVRSVDGFQGGEEDIIIISTVRSNESGKVGFLSNRQRVNVAITRARYCLW 802
>Medtr3g064190.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:28858780-28854927 |
20130731
Length = 906
Score = 283 bits (724), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 135/176 (76%), Positives = 157/176 (89%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQ 60
+LN QYRMHPSISLFP KEFY+E+L DAP V+ SYNR FLEG+M+ SYSFI+IAKGKEQ
Sbjct: 628 LLNTQYRMHPSISLFPNKEFYEEQLVDAPIVREMSYNRCFLEGKMYASYSFINIAKGKEQ 687
Query: 61 FGREHSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVS 120
GR HS KN VEAAVIS+IIGSLK+EF RTRKK+SIGIISPYN+QVYEIQ+KIK + S+S
Sbjct: 688 RGRGHSSKNMVEAAVISKIIGSLKEEFHRTRKKVSIGIISPYNAQVYEIQEKIKPNNSIS 747
Query: 121 DPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIF 176
DP+FSVSVRSVDGFQGGE+D+IIISTVRSN K+GFLSNRQRANVA+TRAR+ ++
Sbjct: 748 DPNFSVSVRSVDGFQGGEEDIIIISTVRSNEDAKIGFLSNRQRANVALTRARHCLW 803
>Medtr5g076330.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32541203-32546485 |
20130731
Length = 898
Score = 271 bits (692), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 131/178 (73%), Positives = 157/178 (88%), Gaps = 1/178 (0%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQ 60
ML+VQYRMHPSIS+FP KEFYD +L+DA V+ SYN+ FLEG+M+GSYSFI+I+KGKEQ
Sbjct: 624 MLDVQYRMHPSISMFPSKEFYDGQLSDANIVREISYNKRFLEGKMYGSYSFINISKGKEQ 683
Query: 61 FGREHSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVS 120
+HSLKN +EAA ISEIIG LKKEF+R R K+SIGIISPY +QV+EIQ+K+K ++ VS
Sbjct: 684 CNHDHSLKNVIEAAAISEIIGRLKKEFVRARNKVSIGIISPYKAQVHEIQEKVKQYM-VS 742
Query: 121 DPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIFDV 178
DP+FSVSVRSVDGFQGGE+D+IIISTVRSN SGKVGFLSNRQRANVA+TRARY ++ V
Sbjct: 743 DPNFSVSVRSVDGFQGGEEDIIIISTVRSNLSGKVGFLSNRQRANVAITRARYCLWIV 800
>Medtr5g076310.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr5:32527815-32524102 |
20130731
Length = 860
Score = 270 bits (689), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 131/177 (74%), Positives = 151/177 (85%), Gaps = 1/177 (0%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQ 60
MLN+QYRMHPSISLFPCKEFYDEKL+DAP VK SYN+ FL G+M+ SYSFI+IAKGKE+
Sbjct: 604 MLNIQYRMHPSISLFPCKEFYDEKLSDAPAVKEVSYNKLFLVGDMYSSYSFINIAKGKEK 663
Query: 61 FGR-EHSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISV 119
G SLKN VE AVISE+I SL K FMRT+KK+SIGIISPYN+QV EIQ+K+K +
Sbjct: 664 LGHCGQSLKNMVEVAVISEMIKSLNKVFMRTKKKVSIGIISPYNAQVNEIQEKVKQYTWD 723
Query: 120 SDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIF 176
+ DFSV+VRSVDGFQGGE+D+IIISTVRSN SG VGFLSNRQRANVAMTRARY ++
Sbjct: 724 TTSDFSVNVRSVDGFQGGEEDIIIISTVRSNGSGNVGFLSNRQRANVAMTRARYCLW 780
>Medtr5g076300.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32517067-32511573 |
20130731
Length = 897
Score = 256 bits (655), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 122/178 (68%), Positives = 155/178 (87%), Gaps = 1/178 (0%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQ 60
MLNVQYRMHPSIS+FP +EFY++KL+D+ V+ SYN+ FL G+M+GSYSFI+I+KGKEQ
Sbjct: 649 MLNVQYRMHPSISIFPSREFYNKKLSDSQIVREISYNKRFLGGKMYGSYSFINISKGKEQ 708
Query: 61 FGREHSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVS 120
+HSLKN +EAA ISEIIG ++KEF+RTR K+SIGIISPY +QV+EIQ+++K ++ VS
Sbjct: 709 CNHDHSLKNVIEAAAISEIIGRIQKEFVRTRNKVSIGIISPYKAQVHEIQERVKQYM-VS 767
Query: 121 DPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIFDV 178
P+FS++VRSVDGFQGGE+D+IIISTVRSN GKVGFLSNRQR NVA+TRARY ++ V
Sbjct: 768 APNFSINVRSVDGFQGGEEDLIIISTVRSNFGGKVGFLSNRQRTNVAITRARYCLWIV 825
>Medtr5g076320.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr5:32534161-32530565 |
20130731
Length = 884
Score = 249 bits (635), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/176 (69%), Positives = 143/176 (81%), Gaps = 10/176 (5%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQ 60
MLNVQYRMHPSISLFPCKEFYD KL DAP V ESYN+ FLEGEM+ SYSFI+IAKGKEQ
Sbjct: 652 MLNVQYRMHPSISLFPCKEFYDGKLCDAPVVGEESYNKLFLEGEMYSSYSFINIAKGKEQ 711
Query: 61 FGREHSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVS 120
FG SLKN VE AVISEII SL + FM+TRKK+SIGI+SPYN+QVYEIQ++I+ + V+
Sbjct: 712 FGHGQSLKNMVEVAVISEIIKSLYEVFMKTRKKVSIGIVSPYNAQVYEIQEEIEQYTKVA 771
Query: 121 DPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIF 176
+ FSV+VRSVDGFQGGE+D+IIISTVRSN +R NVA+TRARY ++
Sbjct: 772 NSKFSVNVRSVDGFQGGEEDIIIISTVRSNG----------RRTNVALTRARYCLW 817
>Medtr5g076500.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32648280-32643985 |
20130731
Length = 857
Score = 243 bits (620), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 139/176 (78%), Gaps = 17/176 (9%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQ 60
MLNVQYRMHPSISLFPCKEFYDEK DA VK +SYN+SFLEGEM+ SYSFI+I+KGKE+
Sbjct: 624 MLNVQYRMHPSISLFPCKEFYDEKNLDALAVKDQSYNKSFLEGEMYSSYSFINISKGKEK 683
Query: 61 FGREHSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVS 120
FG HSLKN VE AVISEII +L+KEFMRT+KK+SIGIISPYN+QVYEIQ+K+K S
Sbjct: 684 FGHGHSLKNMVEVAVISEIIKNLRKEFMRTKKKVSIGIISPYNAQVYEIQEKVKQDTWDS 743
Query: 121 DPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIF 176
+ DFSV+VRSVD + SG VGFLSNRQRANVAMTRARY ++
Sbjct: 744 NSDFSVNVRSVD-----------------DGSGNVGFLSNRQRANVAMTRARYCLW 782
>Medtr3g064210.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:28870689-28861592 |
20130731
Length = 1113
Score = 189 bits (480), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 126/177 (71%), Gaps = 1/177 (0%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQ 60
+LNVQYRMHPSISLFP +FYD +L D+P+VK ++Y + FL +MF S+SFI +A G+++
Sbjct: 706 LLNVQYRMHPSISLFPNMQFYDNQLVDSPSVKEKNYEKHFLSADMFKSFSFIDVAFGEDE 765
Query: 61 FGREHSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVS 120
S +N VE AV+S I+ +L KE + ++ +S+G+ISPY +QV IQ +
Sbjct: 766 LDEGSSRRNMVEVAVVSGIVLNLYKESVSRKQTVSVGVISPYKAQVVAIQDTLDKRFGGD 825
Query: 121 DPD-FSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIF 176
D FSV V +VDGFQGGE+DVIIISTVR N G VGF+SN QR NV++TRARY ++
Sbjct: 826 VNDGFSVKVSTVDGFQGGEEDVIIISTVRHNSMGVVGFISNIQRTNVSLTRARYCLW 882
>Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:12235889-12229184 |
20130731
Length = 1644
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 126/177 (71%), Gaps = 2/177 (1%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQ 60
+LN Q+RMHP ISLFP FY K+ D+P V+ +Y + +L G MFG+YSFI++A G+E+
Sbjct: 639 LLNTQHRMHPEISLFPNSYFYSNKINDSPNVQ-RNYGKKYLPGPMFGTYSFINVAGGREE 697
Query: 61 FGRE-HSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISV 119
F + S KN E AV+ I+ +L K ++ ++K+SIGI+SPY QV +IQ+K+
Sbjct: 698 FDDDGRSYKNIAEVAVVMTILKNLHKVWLAKKEKLSIGIVSPYAGQVLKIQEKLAMMNYS 757
Query: 120 SDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIF 176
S F+V+V+S+DGFQGGEQD+II+STVR+N + F+S+ QR NVA+TRARY ++
Sbjct: 758 SHDGFNVNVKSIDGFQGGEQDIIILSTVRTNYRTSLQFISSPQRTNVALTRARYCLW 814
>Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | scaffold0189:14094-24465 |
20130731
Length = 2395
Score = 171 bits (433), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 123/178 (69%), Gaps = 6/178 (3%)
Query: 2 LNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQF 61
LN+QYRMHP+IS FP FY ++ DAP V ++Y + +L G+MFG YSFI+I G E+F
Sbjct: 619 LNIQYRMHPAISSFPNSCFYLNQILDAPNVISKNYRKQYLPGQMFGPYSFINIIGGTEEF 678
Query: 62 ---GREHSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHIS 118
GR S KN VE V+ +II + + + + + +SIG++SPY +QV+ IQ +
Sbjct: 679 DDAGR--SQKNIVEMVVVMQIIKNCFRAWRDSNENLSIGVVSPYAAQVFAIQDMLGRRYD 736
Query: 119 VSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIF 176
S FSV V+++DGFQGGEQD+II+STVR++ S +GF+SN QR NVA+TRAR+ ++
Sbjct: 737 -SHEGFSVKVKTIDGFQGGEQDIIILSTVRTDCSTSLGFISNNQRTNVALTRARHCLW 793
>Medtr2g105760.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr2:45654495-45634088 |
20130731
Length = 2328
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 106/195 (54%), Gaps = 29/195 (14%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQ 60
ML QYRMHP I FP FYD KL + + +S F E + G Y+F I G+E
Sbjct: 1858 MLTEQYRMHPEICKFPSLHFYDNKLLNGSQMSSKSA--PFHETKGLGPYAFYDIIDGREA 1915
Query: 61 FGREH---SLKNQVEAAVISEIIGSLKK----EFMRTRKKISIGIISPYNSQVYEIQQKI 113
G+ SL N+ EA EI+ KK EF+ R IGII+PY Q+ ++ +
Sbjct: 1916 HGKNSGAMSLCNEHEADAAIEILRFFKKRYPAEFIGGR----IGIITPYKCQLSLLRSRF 1971
Query: 114 KHHI---SVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSG---------KVGFLSNR 161
+ +++D +F+ +VDGFQG E D++++STVR+ SG +GF+++
Sbjct: 1972 LNAFGSSTIADIEFN----TVDGFQGREVDILLLSTVRAGHSGTAASEINSSSIGFVADI 2027
Query: 162 QRANVAMTRARYVIF 176
+R NVA+TRA+ ++
Sbjct: 2028 RRMNVALTRAKLSLW 2042
>Medtr1g052700.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr1:21642650-21636231 |
20130731
Length = 336
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKE- 59
ML QYRMHP I FP EFYD L D VK ++ R + FG +SF I +GKE
Sbjct: 101 MLKTQYRMHPEIRSFPSMEFYDNSLEDGEGVKIQT-ERDWHRYRCFGPFSFFDIHEGKEA 159
Query: 60 QFGREHSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISV 119
+ S N E + + L + + + IISPY+ QV +Q+ + V
Sbjct: 160 KPSGSGSWVNVEEVDFVLLLYQKLVSLYPTLKSGNQVAIISPYSGQVNLFKQRFEETFGV 219
Query: 120 SDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIFDV 178
S V + +VDG QG E+DV I S VR++ G +GF+ +++R NV +TRA+ + V
Sbjct: 220 SAEKL-VDICTVDGCQGREKDVAIFSCVRASKEGGIGFVDDKRRMNVGITRAKSAVLVV 277
>Medtr5g053930.2 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:22211102-22194060 |
20130731
Length = 821
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 91/177 (51%), Gaps = 3/177 (1%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKE- 59
ML QYRMHP I FP EFY+ L D VK ++ R + FG +SF I +GKE
Sbjct: 547 MLKTQYRMHPEIRSFPSMEFYNNSLEDGEGVKIQT-ERDWHRYRCFGPFSFFDIHEGKEA 605
Query: 60 QFGREHSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISV 119
+ S N E + + L + + + IISPY +QV QQ+ + V
Sbjct: 606 RPSGSGSWVNVEEVDFVLLLYQKLVSLYPTLKSGNQVAIISPYKAQVNLFQQRFEETFGV 665
Query: 120 SDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIF 176
S V + +VDG QG E+DV I S VR++ G +GFL + +R NV +TRA+ +
Sbjct: 666 SAEKL-VDICTVDGCQGREKDVAIFSCVRASKEGGIGFLDDIRRMNVGITRAKSAVL 721
>Medtr5g053930.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:22211102-22194060 |
20130731
Length = 821
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 91/177 (51%), Gaps = 3/177 (1%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKE- 59
ML QYRMHP I FP EFY+ L D VK ++ R + FG +SF I +GKE
Sbjct: 547 MLKTQYRMHPEIRSFPSMEFYNNSLEDGEGVKIQT-ERDWHRYRCFGPFSFFDIHEGKEA 605
Query: 60 QFGREHSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISV 119
+ S N E + + L + + + IISPY +QV QQ+ + V
Sbjct: 606 RPSGSGSWVNVEEVDFVLLLYQKLVSLYPTLKSGNQVAIISPYKAQVNLFQQRFEETFGV 665
Query: 120 SDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIF 176
S V + +VDG QG E+DV I S VR++ G +GFL + +R NV +TRA+ +
Sbjct: 666 SAEKL-VDICTVDGCQGREKDVAIFSCVRASKEGGIGFLDDIRRMNVGITRAKSAVL 721
>Medtr8g020390.3 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139954-7131293 | 20130731
Length = 868
Score = 99.4 bits (246), Expect = 2e-21, Method: Composition-based stats.
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 5/178 (2%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQ 60
+L+VQYRMHP I FP + FY +L+D+ +V + + ++ + + Y F I G+E
Sbjct: 557 LLSVQYRMHPQIRDFPSRYFYQGRLSDSESVI-KLPDEAYYKDPLLRPYIFYDIRHGRES 615
Query: 61 F-GREHSLKNQVEAAVISEIIGSLKKEFMRT-RKKISIGIISPYNSQVYEIQQKIKHHIS 118
G S +N EA + ++K KIS+GII+PY Q+ +Q++ + ++
Sbjct: 616 HRGGSVSYQNIHEAQFCLRLYEHIQKTVKSLGLPKISVGIITPYKLQLKCLQREFEEVLN 675
Query: 119 VSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIF 176
S+ + + +VD FQG E+DVII+S VR++ G VGF+++ +R NVA+TRAR ++
Sbjct: 676 -SEEGKDIYINTVDAFQGQERDVIIMSCVRASTHG-VGFVADIRRMNVALTRARRALW 731
>Medtr8g020390.2 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139954-7131293 | 20130731
Length = 1156
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 5/178 (2%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQ 60
+L+VQYRMHP I FP + FY +L+D+ +V + + ++ + + Y F I G+E
Sbjct: 845 LLSVQYRMHPQIRDFPSRYFYQGRLSDSESVI-KLPDEAYYKDPLLRPYIFYDIRHGRES 903
Query: 61 F-GREHSLKNQVEAAVISEIIGSLKKEFMRT-RKKISIGIISPYNSQVYEIQQKIKHHIS 118
G S +N EA + ++K KIS+GII+PY Q+ +Q++ + ++
Sbjct: 904 HRGGSVSYQNIHEAQFCLRLYEHIQKTVKSLGLPKISVGIITPYKLQLKCLQREFEEVLN 963
Query: 119 VSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIF 176
S+ + + +VD FQG E+DVII+S VR++ G VGF+++ +R NVA+TRAR ++
Sbjct: 964 -SEEGKDIYINTVDAFQGQERDVIIMSCVRASTHG-VGFVADIRRMNVALTRARRALW 1019
>Medtr8g020390.1 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139957-7131293 | 20130731
Length = 1373
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 105/178 (58%), Gaps = 5/178 (2%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQ 60
+L+VQYRMHP I FP + FY +L+D+ +V + + ++ + + Y F I G+E
Sbjct: 1062 LLSVQYRMHPQIRDFPSRYFYQGRLSDSESVI-KLPDEAYYKDPLLRPYIFYDIRHGRES 1120
Query: 61 F-GREHSLKNQVEAAVISEIIGSLKKEFMRTR-KKISIGIISPYNSQVYEIQQKIKHHIS 118
G S +N EA + ++K KIS+GII+PY Q+ +Q++ + ++
Sbjct: 1121 HRGGSVSYQNIHEAQFCLRLYEHIQKTVKSLGLPKISVGIITPYKLQLKCLQREFEEVLN 1180
Query: 119 VSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIF 176
S+ + + +VD FQG E+DVII+S VR++ G VGF+++ +R NVA+TRAR ++
Sbjct: 1181 -SEEGKDIYINTVDAFQGQERDVIIMSCVRASTHG-VGFVADIRRMNVALTRARRALW 1236
>Medtr5g013820.2 | regulator of nonsense transcripts protein | HC |
chr5:4548258-4534982 | 20130731
Length = 1275
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 5/176 (2%)
Query: 2 LNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQF 61
L VQYRMHP +S FP FY+ L + TV + F ++ G+E+
Sbjct: 706 LQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSTGIDFPWPVPNRPMFFYVQMGQEEI 765
Query: 62 GRE-HSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVS 120
S N+ EAA + +I+ + K + + IG+I+PY Q I + + ++
Sbjct: 766 SASGTSYLNRTEAANVEKIVTTFLKSGVVPSQ---IGVITPYEGQRAYIVNYMSRNGALR 822
Query: 121 DPDF-SVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVI 175
+ + V SVD FQG E+D II+S VRSN +GFL++ +R NVA+TRARY I
Sbjct: 823 QQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGI 878
>Medtr5g013820.1 | regulator of nonsense transcripts protein | HC |
chr5:4548278-4534982 | 20130731
Length = 1253
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 5/176 (2%)
Query: 2 LNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQF 61
L VQYRMHP +S FP FY+ L + TV + F ++ G+E+
Sbjct: 706 LQVQYRMHPCLSEFPSNSFYEGTLQNGVTVNERQSTGIDFPWPVPNRPMFFYVQMGQEEI 765
Query: 62 GREH-SLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVS 120
S N+ EAA + +I+ + K + + IG+I+PY Q I + + ++
Sbjct: 766 SASGTSYLNRTEAANVEKIVTTFLKSGVVPSQ---IGVITPYEGQRAYIVNYMSRNGALR 822
Query: 121 DPDF-SVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVI 175
+ + V SVD FQG E+D II+S VRSN +GFL++ +R NVA+TRARY I
Sbjct: 823 QQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGI 878
>Medtr7g092200.1 | DNA-binding protein SMUBP-2 | HC |
chr7:36518499-36511162 | 20130731
Length = 645
Score = 85.1 bits (209), Expect = 4e-17, Method: Composition-based stats.
Identities = 69/180 (38%), Positives = 96/180 (53%), Gaps = 18/180 (10%)
Query: 1 MLNVQYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYS-----FIHIA 55
ML VQYRMH I + KE Y+ K+ V S+ LEG S + I A
Sbjct: 436 MLTVQYRMHQLIMDWSSKELYNSKVKAHACVA--SHMLYDLEGVKKTSSTEPTLLLIDTA 493
Query: 56 --KGKEQFGREHSLKNQVEAAVISEIIGSLKKEFMRTRKKIS-IGIISPYNSQVYEIQQK 112
+E+ E S N+ E SE+ + K +++ S IGII+PY +QV ++
Sbjct: 494 GCDMEEKKDEEDSTLNEGE----SEVAMAHAKRLVQSGVLPSDIGIITPYAAQVVLLKML 549
Query: 113 IKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRAR 172
S+ D + + +VDGFQG E++ IIIS VRSN +VGFLS+R+R NVA+TRAR
Sbjct: 550 KNKENSLKD----IEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRAR 605
>Medtr5g006890.4 | RNA helicase SDE3-like protein | HC |
chr5:1125978-1129505 | 20130731
Length = 681
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 5 QYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQFGRE 64
YR HP I P K FY +L FL + F F I E+ G
Sbjct: 360 NYRCHPEILYLPSKLFYFGELMACRDPSTFMVTAEFLPNKEF-PVLFFGIQGCDEREGNN 418
Query: 65 HSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDF 124
S N++E + + E +G L + R++ IGII+PY QV +I+Q ++ ++ PD
Sbjct: 419 PSWFNRIEVSKVVETVGKLING-GKIREE-DIGIITPYRQQVLKIKQTLE---NLEMPD- 472
Query: 125 SVSVRSVDGFQGGEQDVIIISTVRSNPSGK-------VGFLSNRQRANVAMTRA 171
V V SV+ FQG E++VII+STVRS +GFLSN +R NVA+TRA
Sbjct: 473 -VKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRFNVAITRA 525
>Medtr5g006890.3 | RNA helicase SDE3-like protein | HC |
chr5:1125978-1129505 | 20130731
Length = 681
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 5 QYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQFGRE 64
YR HP I P K FY +L FL + F F I E+ G
Sbjct: 360 NYRCHPEILYLPSKLFYFGELMACRDPSTFMVTAEFLPNKEF-PVLFFGIQGCDEREGNN 418
Query: 65 HSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDF 124
S N++E + + E +G L + R++ IGII+PY QV +I+Q ++ ++ PD
Sbjct: 419 PSWFNRIEVSKVVETVGKLING-GKIREE-DIGIITPYRQQVLKIKQTLE---NLEMPD- 472
Query: 125 SVSVRSVDGFQGGEQDVIIISTVRSNPSGK-------VGFLSNRQRANVAMTRA 171
V V SV+ FQG E++VII+STVRS +GFLSN +R NVA+TRA
Sbjct: 473 -VKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRFNVAITRA 525
>Medtr2g049990.2 | RNA helicase SDE3-like protein | HC |
chr2:22979235-22972717 | 20130731
Length = 681
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 5 QYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQFGRE 64
YR HP I P K FY +L FL + F F I E+ G
Sbjct: 360 NYRCHPEILYLPSKLFYFGELMACRDPSTFMVTAEFLPNKEF-PVLFFGIQGCDEREGNN 418
Query: 65 HSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDF 124
S N++E + + E +G L + R++ IGII+PY QV +I+Q ++ ++ PD
Sbjct: 419 PSWFNRIEVSKVVETVGKLING-GKIREE-DIGIITPYRQQVLKIKQTLE---NLEMPD- 472
Query: 125 SVSVRSVDGFQGGEQDVIIISTVRSNPSGK-------VGFLSNRQRANVAMTRA 171
V V SV+ FQG E++VII+STVRS +GFLSN +R NVA+TRA
Sbjct: 473 -VKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRFNVAITRA 525
>Medtr5g006890.1 | RNA helicase SDE3-like protein | HC |
chr5:1125101-1129505 | 20130731
Length = 940
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 5 QYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQFGRE 64
YR HP I P K FY +L FL + F F I E+ G
Sbjct: 619 NYRCHPEILYLPSKLFYFGELMACRDPSTFMVTAEFLPNKEF-PVLFFGIQGCDEREGNN 677
Query: 65 HSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDF 124
S N++E + + E +G L + R++ IGII+PY QV +I+Q +++ + PD
Sbjct: 678 PSWFNRIEVSKVVETVGKLING-GKIREE-DIGIITPYRQQVLKIKQTLEN---LEMPD- 731
Query: 125 SVSVRSVDGFQGGEQDVIIISTVRSNPSGK-------VGFLSNRQRANVAMTRA 171
V V SV+ FQG E++VII+STVRS +GFLSN +R NVA+TRA
Sbjct: 732 -VKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRFNVAITRA 784
>Medtr5g006890.2 | RNA helicase SDE3-like protein | HC |
chr5:1125101-1129505 | 20130731
Length = 940
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 5 QYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQFGRE 64
YR HP I P K FY +L FL + F F I E+ G
Sbjct: 619 NYRCHPEILYLPSKLFYFGELMACRDPSTFMVTAEFLPNKEF-PVLFFGIQGCDEREGNN 677
Query: 65 HSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDF 124
S N++E + + E +G L + R++ IGII+PY QV +I+Q +++ + PD
Sbjct: 678 PSWFNRIEVSKVVETVGKLING-GKIREE-DIGIITPYRQQVLKIKQTLEN---LEMPD- 731
Query: 125 SVSVRSVDGFQGGEQDVIIISTVRSNPSGK-------VGFLSNRQRANVAMTRA 171
V V SV+ FQG E++VII+STVRS +GFLSN +R NVA+TRA
Sbjct: 732 -VKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRFNVAITRA 784
>Medtr2g049990.1 | RNA helicase SDE3-like protein | HC |
chr2:22979235-22972717 | 20130731
Length = 940
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 5 QYRMHPSISLFPCKEFYDEKLTDAPTVKGESYNRSFLEGEMFGSYSFIHIAKGKEQFGRE 64
YR HP I P K FY +L FL + F F I E+ G
Sbjct: 619 NYRCHPEILYLPSKLFYFGELMACRDPSTFMVTAEFLPNKEF-PVLFFGIQGCDEREGNN 677
Query: 65 HSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVSDPDF 124
S N++E + + E +G L + R++ IGII+PY QV +I+Q +++ + PD
Sbjct: 678 PSWFNRIEVSKVVETVGKLING-GKIREE-DIGIITPYRQQVLKIKQTLEN---LEMPD- 731
Query: 125 SVSVRSVDGFQGGEQDVIIISTVRSNPSGK-------VGFLSNRQRANVAMTRA 171
V V SV+ FQG E++VII+STVRS +GFLSN +R NVA+TRA
Sbjct: 732 -VKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRFNVAITRA 784
>Medtr1g040155.1 | DNA-binding protein SMUBP-2 | HC |
chr1:14742280-14736383 | 20130731
Length = 914
Score = 70.5 bits (171), Expect = 9e-13, Method: Composition-based stats.
Identities = 62/186 (33%), Positives = 91/186 (48%), Gaps = 24/186 (12%)
Query: 2 LNVQYRMHPSISLFPCKEFY-----------DEKLTDAPTVKGESYNRS---FLEGEM-F 46
L QYRM+ +I+ + KE Y L D+P VK + L+ M +
Sbjct: 683 LTTQYRMNDAIASWASKEMYGGLLKSSKTVFSHLLVDSPFVKPTWITQCPLLLLDTRMPY 742
Query: 47 GSYSFIHIAKGKEQFGREHSLKNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQV 106
GS S I + +Q G SL N+ EA ++ + + SL + +I + SPY +QV
Sbjct: 743 GSLS-IGCEEHLDQAG-TGSLYNEGEADIVLQHVFSLIYAGVSPN---AIVVQSPYVAQV 797
Query: 107 YEIQQKIKHHISVSDPDFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANV 166
Q ++ + V ++D FQG E D +I+S VRSN G VGFL + +R NV
Sbjct: 798 ----QLLRDMLDGVPEAAGTEVSTIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINV 853
Query: 167 AMTRAR 172
A+TRAR
Sbjct: 854 AITRAR 859
>Medtr5g080800.1 | AAA domain protein | LC | chr5:34606228-34600879
| 20130731
Length = 1281
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 41/54 (75%), Gaps = 5/54 (9%)
Query: 123 DFSVSVRSVDGFQGGEQDVIIISTVRSNPSGKVGFLSNRQRANVAMTRARYVIF 176
DF+V V+++DGFQGGEQD+II STVR++ S + QR NVA+TRAR+ ++
Sbjct: 11 DFNVKVKTIDGFQGGEQDIIIFSTVRTDCSTSLD-----QRTNVALTRARHCLW 59
>Medtr7g034575.1 | DNA replication ATP-dependent helicase Dna2 | HC |
chr7:13072986-13090873 | 20130731
Length = 1335
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 15/114 (13%)
Query: 63 REHSL-KNQVEAAVISEIIGSLKKEFMRTRKKISIGIISPYNSQVYEIQQKIKHHISVSD 121
R+H + N +EA +I+E+ L K + I +PYNSQ I+H ++
Sbjct: 1171 RDHKIVNNPIEAHIIAEVAKELVKNGIGGENIGII---TPYNSQA----NLIRHATCIT- 1222
Query: 122 PDFSVSVRSVDGFQGGEQDVIIISTVRS--NPSGKVG-FLSNRQRANVAMTRAR 172
S+ + ++D +QG ++D I++S VRS NP+ V L + R NVA+TRA+
Sbjct: 1223 ---SLEIHTIDKYQGRDKDCILVSFVRSCENPTSCVASLLGDWHRINVALTRAK 1273