Miyakogusa Predicted Gene

Lj0g3v0123039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0123039.1 Non Characterized Hit- tr|I1J1J5|I1J1J5_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,73.08,0.0000000000001,seg,NULL;
Exostosin,Exostosin-like,CUFF.7368.1
         (159 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g029350.1 | exostosin family protein | HC | chr1:10041664-...   192   2e-49

>Medtr1g029350.1 | exostosin family protein | HC |
           chr1:10041664-10048151 | 20130731
          Length = 447

 Score =  192 bits (487), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 98/161 (60%), Positives = 110/161 (68%), Gaps = 2/161 (1%)

Query: 1   MWSASNSNKQRTMPSXXXXXXXCTRSHQIGXXXXXXXXXXXXXXXDSPCXXXXXXXXXXX 60
           M S+S +NK RTM         CTR+HQIG               ++PC           
Sbjct: 1   MLSSSTTNKSRTMHHHHQHQPLCTRTHQIGALILVAATFFFTRLLNAPCSFSSAVSQRKF 60

Query: 61  XPRN--LPEDPPSLKIYVYDPNEIDGLNELMRGRDGKITEEACLKGQWGSQVKIHKLLLQ 118
              +  L  +  ++KIYVYD NEIDGL EL++GRDGKIT EACLKGQWGSQVKIHKLLL+
Sbjct: 61  VGVHPLLESEELTVKIYVYDENEIDGLKELLKGRDGKITPEACLKGQWGSQVKIHKLLLE 120

Query: 119 SRCRTRKKEEADLFFVPSYVKCARMMGGLNDKEINHTYVKV 159
           SR RTRKKEEADLFFVPSYVKCARMMGGLNDKEINHTYVKV
Sbjct: 121 SRYRTRKKEEADLFFVPSYVKCARMMGGLNDKEINHTYVKV 161