Miyakogusa Predicted Gene

Lj0g3v0122989.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0122989.1 tr|I1MT00|I1MT00_SOYBN DNA-directed RNA
polymerase OS=Glycine max GN=Gma.48961 PE=3
SV=1,79.72,0,RNA_POL_PHAGE_2,DNA-directed RNA polymerase, phage-type;
RNA_POL_PHAGE_1,DNA-directed RNA polymerase,CUFF.7423.1
         (732 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g065900.1 | DNA-directed RNA polymerase-like protein | HC ...   736   0.0  
Medtr7g017440.1 | leguminosin group485 secreted peptide | HC | c...   637   0.0  
Medtr8g065960.1 | DNA-directed RNA polymerase | HC | chr8:274041...   103   6e-22

>Medtr8g065900.1 | DNA-directed RNA polymerase-like protein | HC |
           chr8:27401434-27394114 | 20130731
          Length = 727

 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/582 (61%), Positives = 448/582 (76%), Gaps = 3/582 (0%)

Query: 148 LQSKKTEADTEENLNNDKEKQRKFVNGLIKR-KKLKEVHVVLKQEEVSPWSRAAQAKLGS 206
           ++ +   A+  E L  ++++ R  V  LIK+ KK + + +V  +++  PW + AQ K+GS
Sbjct: 23  VKGENLTAEENEKLAKEEKRLRNKVASLIKKQKKQQALGIVKGRDQAKPWGQEAQVKVGS 82

Query: 207 RLIELLIETAYVHSPVNQSADTPPDIRPAFRHGFKPQSRSPGQKILKNYGVIQCDPLVLA 266
           RLI+LLIETAY+  P N+  D  PDI PAF+H  K  S        + YGVI+CDP++  
Sbjct: 83  RLIQLLIETAYLEPPANKFGDGGPDIFPAFKHTLKTISNDSNNGS-RRYGVIECDPMIQK 141

Query: 267 GLEKCAKHXXXXXXXXXXXXKKWKGYDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQ 326
           GLEK A++              W GYDKG +LFLPSY+MR HG+++Q+D +K     Q+ 
Sbjct: 142 GLEKTARNMVIPYMPMLVPPNNWIGYDKGAYLFLPSYVMRIHGAKQQRDALKWAPKNQLD 201

Query: 327 KVFEALDILGNTKRRINGRLLDVVESIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEW 386
            +FEAL+ LGNTK R+N  +L V++ IWA GG VA LVD +++PLP++  TED  +I++W
Sbjct: 202 SIFEALNTLGNTKWRVNKSVLGVIDQIWANGGRVADLVDRDDLPLPEELDTEDESEIRKW 261

Query: 387 KYRVRKAKKMNLERHSQRCDTELKLSVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLG 446
           K++V+  KK N ERHSQRCD ELKL+VARK+K+ED FYYPHNLDFRGRAYPMHP+LNHLG
Sbjct: 262 KWKVKNVKKENNERHSQRCDIELKLAVARKLKEEDGFYYPHNLDFRGRAYPMHPYLNHLG 321

Query: 447 SDLCRGLLEFAEGRPLGKSGLRWLKIHLANLYA-GGIEKLSYDGRLGFVENHIHDIFDSA 505
           SDLCRG+LEFAEGRPLGK GL+WLKIHLANLYA GG++KLSYDGR+ F E+H+ DIFDSA
Sbjct: 322 SDLCRGILEFAEGRPLGKKGLQWLKIHLANLYATGGVDKLSYDGRVAFTEDHLDDIFDSA 381

Query: 506 DNPVNGNRWWLRAEDPFQCLAACINLSEALRSSSPNSVISHLPIHQDGSCNGLQHYAALG 565
           D P+ G RWWL+AEDPFQCLAACINLSEALRS +P + +SH+P+HQDGSCNGLQHYAALG
Sbjct: 382 DRPLEGKRWWLQAEDPFQCLAACINLSEALRSPNPEATLSHMPVHQDGSCNGLQHYAALG 441

Query: 566 RDELEAAAVNLVAKEKPADVYSEIAVRVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKL 625
           RD+L A+AVNLV  +KPADVYS IA RV  IM+RD+ KDP+T P+AL A+ LI+Q+DRKL
Sbjct: 442 RDKLGASAVNLVGGDKPADVYSGIAARVLQIMKRDALKDPATDPHALHARRLINQVDRKL 501

Query: 626 VKQTVMTSVYGVTYIGARDQIKKRLEEKGLITDDRLLFTAACYAAKVTLAALGEVFEAAR 685
           VKQTVMTSVYGVTYIGARDQIK+RL+E+  + DD  LF A+CYAAK TL AL E+FEAAR
Sbjct: 502 VKQTVMTSVYGVTYIGARDQIKRRLKERCAVEDDSELFAASCYAAKTTLTALEEMFEAAR 561

Query: 686 GIMSWLGDCAKVIAYENQAVHWTTPLGLPVVQPYCKTERHLV 727
            IM WLGDCAKVIA  NQAV W TPLGLPVVQPY +  RHL+
Sbjct: 562 SIMGWLGDCAKVIACTNQAVRWVTPLGLPVVQPYREVGRHLI 603


>Medtr7g017440.1 | leguminosin group485 secreted peptide | HC |
           chr7:5556630-5564677 | 20130731
          Length = 566

 Score =  637 bits (1642), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/436 (69%), Positives = 367/436 (84%)

Query: 292 YDKGGHLFLPSYIMRTHGSRKQQDVMKNVKGEQMQKVFEALDILGNTKRRINGRLLDVVE 351
           +DKGG+LFLPSY+MRTHG ++Q++ +K V  +Q++ VFEALD LGNTK R+N ++L VV+
Sbjct: 7   FDKGGYLFLPSYVMRTHGVKQQREAVKKVPRKQLEPVFEALDTLGNTKWRVNNKVLSVVD 66

Query: 352 SIWAGGGNVAGLVDCENVPLPDKPPTEDLKQIQEWKYRVRKAKKMNLERHSQRCDTELKL 411
            IWAGGG +AGLVD  +V +P++  ++D  + ++WK++V+  KK N ER+S RCDTELKL
Sbjct: 67  RIWAGGGRLAGLVDRNDVEIPEELESDDEAEKKKWKWKVKSVKKENRERYSLRCDTELKL 126

Query: 412 SVARKMKDEDCFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGRPLGKSGLRWLK 471
           +VARKMKDE+CFYYPHNLDFRGRAYPMHPHLNHLGSD+CRG+LEFA+GRPLGKSGL WLK
Sbjct: 127 AVARKMKDEECFYYPHNLDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGLHWLK 186

Query: 472 IHLANLYAGGIEKLSYDGRLGFVENHIHDIFDSADNPVNGNRWWLRAEDPFQCLAACINL 531
           IHLANLY GG++KLS +GR+ FVENH+ +IFDSA+ P+ G RWWL AEDPFQ LAAC+ L
Sbjct: 187 IHLANLYGGGVDKLSNEGRITFVENHLDEIFDSAEQPMEGRRWWLNAEDPFQFLAACMTL 246

Query: 532 SEALRSSSPNSVISHLPIHQDGSCNGLQHYAALGRDELEAAAVNLVAKEKPADVYSEIAV 591
           +EAL+ S+P S ISH+P+HQDGSCNGLQHYAALGRD+L AAAVNLVA EKPADVYS IA 
Sbjct: 247 TEALKISTPESFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAA 306

Query: 592 RVHDIMRRDSNKDPSTFPNALLAKVLIDQIDRKLVKQTVMTSVYGVTYIGARDQIKKRLE 651
           RV  IM+ D+ KDP TF  A  AK+L++Q+DRKLVKQTVMTSVYGVTYIGAR+QIK+RL+
Sbjct: 307 RVLAIMKIDAQKDPETFSEARHAKILVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLK 366

Query: 652 EKGLITDDRLLFTAACYAAKVTLAALGEVFEAARGIMSWLGDCAKVIAYENQAVHWTTPL 711
           E+  I DD  LF AACYAAKVTL AL E+FE AR IM+WLGDCAKVIA EN+ V WTTPL
Sbjct: 367 ERDAIADDSELFGAACYAAKVTLTALQEMFEGARSIMNWLGDCAKVIASENEPVCWTTPL 426

Query: 712 GLPVVQPYCKTERHLV 727
           GLPVVQPY    RH+V
Sbjct: 427 GLPVVQPYRYQGRHIV 442


>Medtr8g065960.1 | DNA-directed RNA polymerase | HC |
           chr8:27404131-27403218 | 20130731
          Length = 259

 Score =  103 bits (257), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 57/123 (46%), Positives = 72/123 (58%), Gaps = 4/123 (3%)

Query: 16  LRRRQIEAETEAWXXXXXXXXXXXXXXXXXXXAPNLPRVKSLLLGWFEPLKEAVEAEQKA 75
           LRRRQI+ ETEAW                   APNLP +KSL LGWFEPLK A+ A+Q+ 
Sbjct: 139 LRRRQIKIETEAWEEAAREYQELLEDMREQKLAPNLPYMKSLFLGWFEPLKNAIAADQEI 198

Query: 76  HQARSKKQQASIAPNVDSLPAAKVAVIVMHKMMSLVMENEEGC--VQLVQAAVQIGMALE 133
              +  K + S AP  + LP   +AVI MHK+M L+M N  G    +++QAA QIG A+E
Sbjct: 199 --CKDTKTRLSHAPYFNELPPDMMAVITMHKLMGLLMTNSNGVGSARVIQAACQIGEAIE 256

Query: 134 QEV 136
            EV
Sbjct: 257 HEV 259