Miyakogusa Predicted Gene

Lj0g3v0122759.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0122759.1 Non Characterized Hit- tr|J3LDG8|J3LDG8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB02G2,56.32,4e-19,DUF4137,Putative sodium bile acid cotransporter;
GB DEF: HYPOTHETICAL PROTEIN F18O21_120,NULL; FAMIL,CUFF.7343.1
         (154 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g050462.2 | Na+-bile acid cotransporter | HC | chr1:194385...   136   8e-33
Medtr1g050462.1 | Na+-bile acid cotransporter | HC | chr1:194385...   136   8e-33
Medtr1g050462.7 | Na+-bile acid cotransporter | HC | chr1:194385...   136   1e-32
Medtr1g050462.5 | Na+-bile acid cotransporter | HC | chr1:194385...   136   1e-32
Medtr1g050462.6 | Na+-bile acid cotransporter | HC | chr1:194385...   136   1e-32
Medtr1g050462.4 | Na+-bile acid cotransporter | HC | chr1:194385...   135   1e-32
Medtr1g050462.3 | Na+-bile acid cotransporter | HC | chr1:194385...   135   1e-32

>Medtr1g050462.2 | Na+-bile acid cotransporter | HC |
           chr1:19438571-19428220 | 20130731
          Length = 407

 Score =  136 bits (342), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/160 (54%), Positives = 96/160 (60%), Gaps = 17/160 (10%)

Query: 1   MAGA-AHSLVLTALPATGSSFPRRNVLFPASHR---LPSAVKLVTLRSAVCVAHRRKHSP 56
           MAG  AH L+LT      SSFPR N LF  S R   LPSAVK +TLR      HR   +P
Sbjct: 1   MAGTTAHLLILTP---HSSSFPRPNPLFLPSSRPRHLPSAVKSLTLR------HR--PTP 49

Query: 57  VRVCAQSQEM--XXXXXXXXXXXXWAEPIFRFARSNXXXXXXXXXXXXXXXYPSLGCAVD 114
            R CAQS ++              W EPI  FAR N                PSLGCAVD
Sbjct: 50  FRPCAQSNQLDGSGSGSKESKGLSWVEPILSFARGNVLPLALISAVTLGLTCPSLGCAVD 109

Query: 115 KYNVSKLGPFGIFVISGLLLRSEEIGAALEAWPVGLFGLV 154
           KY+VSK+GPFGIFVISGL+LRSEEIGAA+EAWPVGLFGLV
Sbjct: 110 KYHVSKIGPFGIFVISGLVLRSEEIGAAVEAWPVGLFGLV 149


>Medtr1g050462.1 | Na+-bile acid cotransporter | HC |
           chr1:19438571-19428186 | 20130731
          Length = 414

 Score =  136 bits (342), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/160 (54%), Positives = 96/160 (60%), Gaps = 17/160 (10%)

Query: 1   MAGA-AHSLVLTALPATGSSFPRRNVLFPASHR---LPSAVKLVTLRSAVCVAHRRKHSP 56
           MAG  AH L+LT      SSFPR N LF  S R   LPSAVK +TLR      HR   +P
Sbjct: 1   MAGTTAHLLILTP---HSSSFPRPNPLFLPSSRPRHLPSAVKSLTLR------HR--PTP 49

Query: 57  VRVCAQSQEM--XXXXXXXXXXXXWAEPIFRFARSNXXXXXXXXXXXXXXXYPSLGCAVD 114
            R CAQS ++              W EPI  FAR N                PSLGCAVD
Sbjct: 50  FRPCAQSNQLDGSGSGSKESKGLSWVEPILSFARGNVLPLALISAVTLGLTCPSLGCAVD 109

Query: 115 KYNVSKLGPFGIFVISGLLLRSEEIGAALEAWPVGLFGLV 154
           KY+VSK+GPFGIFVISGL+LRSEEIGAA+EAWPVGLFGLV
Sbjct: 110 KYHVSKIGPFGIFVISGLVLRSEEIGAAVEAWPVGLFGLV 149


>Medtr1g050462.7 | Na+-bile acid cotransporter | HC |
           chr1:19438509-19428220 | 20130731
          Length = 283

 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/160 (54%), Positives = 96/160 (60%), Gaps = 17/160 (10%)

Query: 1   MAGA-AHSLVLTALPATGSSFPRRNVLFPASHR---LPSAVKLVTLRSAVCVAHRRKHSP 56
           MAG  AH L+LT      SSFPR N LF  S R   LPSAVK +TLR      HR   +P
Sbjct: 1   MAGTTAHLLILTP---HSSSFPRPNPLFLPSSRPRHLPSAVKSLTLR------HRP--TP 49

Query: 57  VRVCAQSQEM--XXXXXXXXXXXXWAEPIFRFARSNXXXXXXXXXXXXXXXYPSLGCAVD 114
            R CAQS ++              W EPI  FAR N                PSLGCAVD
Sbjct: 50  FRPCAQSNQLDGSGSGSKESKGLSWVEPILSFARGNVLPLALISAVTLGLTCPSLGCAVD 109

Query: 115 KYNVSKLGPFGIFVISGLLLRSEEIGAALEAWPVGLFGLV 154
           KY+VSK+GPFGIFVISGL+LRSEEIGAA+EAWPVGLFGLV
Sbjct: 110 KYHVSKIGPFGIFVISGLVLRSEEIGAAVEAWPVGLFGLV 149


>Medtr1g050462.5 | Na+-bile acid cotransporter | HC |
           chr1:19438509-19428220 | 20130731
          Length = 283

 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/160 (54%), Positives = 96/160 (60%), Gaps = 17/160 (10%)

Query: 1   MAGA-AHSLVLTALPATGSSFPRRNVLFPASHR---LPSAVKLVTLRSAVCVAHRRKHSP 56
           MAG  AH L+LT      SSFPR N LF  S R   LPSAVK +TLR      HR   +P
Sbjct: 1   MAGTTAHLLILTP---HSSSFPRPNPLFLPSSRPRHLPSAVKSLTLR------HRP--TP 49

Query: 57  VRVCAQSQEM--XXXXXXXXXXXXWAEPIFRFARSNXXXXXXXXXXXXXXXYPSLGCAVD 114
            R CAQS ++              W EPI  FAR N                PSLGCAVD
Sbjct: 50  FRPCAQSNQLDGSGSGSKESKGLSWVEPILSFARGNVLPLALISAVTLGLTCPSLGCAVD 109

Query: 115 KYNVSKLGPFGIFVISGLLLRSEEIGAALEAWPVGLFGLV 154
           KY+VSK+GPFGIFVISGL+LRSEEIGAA+EAWPVGLFGLV
Sbjct: 110 KYHVSKIGPFGIFVISGLVLRSEEIGAAVEAWPVGLFGLV 149


>Medtr1g050462.6 | Na+-bile acid cotransporter | HC |
           chr1:19438509-19428220 | 20130731
          Length = 283

 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/160 (54%), Positives = 96/160 (60%), Gaps = 17/160 (10%)

Query: 1   MAGA-AHSLVLTALPATGSSFPRRNVLFPASHR---LPSAVKLVTLRSAVCVAHRRKHSP 56
           MAG  AH L+LT      SSFPR N LF  S R   LPSAVK +TLR      HR   +P
Sbjct: 1   MAGTTAHLLILTP---HSSSFPRPNPLFLPSSRPRHLPSAVKSLTLR------HRP--TP 49

Query: 57  VRVCAQSQEM--XXXXXXXXXXXXWAEPIFRFARSNXXXXXXXXXXXXXXXYPSLGCAVD 114
            R CAQS ++              W EPI  FAR N                PSLGCAVD
Sbjct: 50  FRPCAQSNQLDGSGSGSKESKGLSWVEPILSFARGNVLPLALISAVTLGLTCPSLGCAVD 109

Query: 115 KYNVSKLGPFGIFVISGLLLRSEEIGAALEAWPVGLFGLV 154
           KY+VSK+GPFGIFVISGL+LRSEEIGAA+EAWPVGLFGLV
Sbjct: 110 KYHVSKIGPFGIFVISGLVLRSEEIGAAVEAWPVGLFGLV 149


>Medtr1g050462.4 | Na+-bile acid cotransporter | HC |
           chr1:19438509-19428220 | 20130731
          Length = 319

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/160 (54%), Positives = 96/160 (60%), Gaps = 17/160 (10%)

Query: 1   MAGA-AHSLVLTALPATGSSFPRRNVLFPASHR---LPSAVKLVTLRSAVCVAHRRKHSP 56
           MAG  AH L+LT      SSFPR N LF  S R   LPSAVK +TLR      HR   +P
Sbjct: 1   MAGTTAHLLILTP---HSSSFPRPNPLFLPSSRPRHLPSAVKSLTLR------HR--PTP 49

Query: 57  VRVCAQSQEM--XXXXXXXXXXXXWAEPIFRFARSNXXXXXXXXXXXXXXXYPSLGCAVD 114
            R CAQS ++              W EPI  FAR N                PSLGCAVD
Sbjct: 50  FRPCAQSNQLDGSGSGSKESKGLSWVEPILSFARGNVLPLALISAVTLGLTCPSLGCAVD 109

Query: 115 KYNVSKLGPFGIFVISGLLLRSEEIGAALEAWPVGLFGLV 154
           KY+VSK+GPFGIFVISGL+LRSEEIGAA+EAWPVGLFGLV
Sbjct: 110 KYHVSKIGPFGIFVISGLVLRSEEIGAAVEAWPVGLFGLV 149


>Medtr1g050462.3 | Na+-bile acid cotransporter | HC |
           chr1:19438509-19428220 | 20130731
          Length = 319

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/160 (54%), Positives = 96/160 (60%), Gaps = 17/160 (10%)

Query: 1   MAGA-AHSLVLTALPATGSSFPRRNVLFPASHR---LPSAVKLVTLRSAVCVAHRRKHSP 56
           MAG  AH L+LT      SSFPR N LF  S R   LPSAVK +TLR      HR   +P
Sbjct: 1   MAGTTAHLLILTP---HSSSFPRPNPLFLPSSRPRHLPSAVKSLTLR------HR--PTP 49

Query: 57  VRVCAQSQEM--XXXXXXXXXXXXWAEPIFRFARSNXXXXXXXXXXXXXXXYPSLGCAVD 114
            R CAQS ++              W EPI  FAR N                PSLGCAVD
Sbjct: 50  FRPCAQSNQLDGSGSGSKESKGLSWVEPILSFARGNVLPLALISAVTLGLTCPSLGCAVD 109

Query: 115 KYNVSKLGPFGIFVISGLLLRSEEIGAALEAWPVGLFGLV 154
           KY+VSK+GPFGIFVISGL+LRSEEIGAA+EAWPVGLFGLV
Sbjct: 110 KYHVSKIGPFGIFVISGLVLRSEEIGAAVEAWPVGLFGLV 149