Miyakogusa Predicted Gene

Lj0g3v0121929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0121929.1 tr|D7LR49|D7LR49_ARALL Methyltransferase/ nucleic
acid binding protein OS=Arabidopsis lyrata subsp.
,60.27,6e-19,seg,NULL,NODE_67156_length_1648_cov_15.934466.path1.1
         (73 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094315.1 | methyltransferase/nucleic acid-binding protein...   119   7e-28

>Medtr4g094315.1 | methyltransferase/nucleic acid-binding protein
          | HC | chr4:37714922-37710041 | 20130731
          Length = 482

 Score =  119 bits (298), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 57/73 (78%), Positives = 62/73 (84%), Gaps = 1/73 (1%)

Query: 1  MWYLCVFFHRLLDYRKPEVESLAQLFGEANQNXXXXXXXXQLQWKLPLHHHPDSPFHLVN 60
          MWYLCVFFHRLLDYRKPEVESLA+LFG  + N        QLQWKLPLHHHPDSPFHLVN
Sbjct: 1  MWYLCVFFHRLLDYRKPEVESLAKLFGAFDDNQNDDVHP-QLQWKLPLHHHPDSPFHLVN 59

Query: 61 LPSEQLARDIANR 73
          LPSE++AR+IANR
Sbjct: 60 LPSEEIARNIANR 72