Miyakogusa Predicted Gene

Lj0g3v0121919.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0121919.1 Non Characterized Hit- tr|C0HFZ2|C0HFZ2_MAIZE
Uncharacterized protein OS=Zea mays PE=4
SV=1,60.29,0.00000000000002,SUBFAMILY NOT NAMED,NULL; RNA
METHYLASE-RELATED,NULL,FS361265.path1.1
         (119 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094315.1 | methyltransferase/nucleic acid-binding protein...   194   2e-50

>Medtr4g094315.1 | methyltransferase/nucleic acid-binding protein |
           HC | chr4:37714922-37710041 | 20130731
          Length = 482

 Score =  194 bits (492), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 94/119 (78%), Positives = 102/119 (85%), Gaps = 1/119 (0%)

Query: 1   MLVMGGRLVFFYPVLRDDDFSEIHFPEHPCFKLICSSEQILSSRYSRVLLTMVKIGPYTE 60
           MLV+GGRLVFFYPVLR+++    HFPEHPCFKLI SSEQILSSRY RVLLTMVKIGPYTE
Sbjct: 365 MLVLGGRLVFFYPVLREEESPHNHFPEHPCFKLISSSEQILSSRYCRVLLTMVKIGPYTE 424

Query: 61  EIQEEARIKHIEFRENHVKWLEDGNLHSGVFSPADDQLSETGDFKSIKDQKPKYRGKYV 119
           EI   AR++H+EFRENHVKWLEDGNLHS VFSP D QL ETGD+K IKD   KYRGKYV
Sbjct: 425 EISLAARMQHLEFRENHVKWLEDGNLHSAVFSPVDAQLKETGDYK-IKDSTKKYRGKYV 482