Miyakogusa Predicted Gene
- Lj0g3v0121809.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0121809.1 tr|Q0J729|Q0J729_ORYSJ Os08g0238100 protein
OS=Oryza sativa subsp. japonica GN=Os08g0238100 PE=4
SV=,33.98,9e-19,PPR,Pentatricopeptide repeat; PENTATRICOPEPTIDE (PPR)
REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT NAM,CUFF.7274.1
(230 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 283 1e-76
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 78 6e-15
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 4e-14
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 75 4e-14
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 2e-13
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 6e-13
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 7e-13
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 71 1e-12
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 71 1e-12
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 70 1e-12
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 70 1e-12
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 70 2e-12
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 70 2e-12
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 70 2e-12
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 70 2e-12
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 3e-12
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 5e-12
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 68 6e-12
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 67 1e-11
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 67 2e-11
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 67 2e-11
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 67 2e-11
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 66 2e-11
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 4e-11
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 5e-11
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 5e-11
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 65 6e-11
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 65 7e-11
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 8e-11
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 65 8e-11
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 64 9e-11
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 1e-10
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-10
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-10
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 64 2e-10
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 63 2e-10
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 63 2e-10
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 63 2e-10
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 4e-10
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 62 5e-10
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 6e-10
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 61 7e-10
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 7e-10
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 7e-10
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 8e-10
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 61 8e-10
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 1e-09
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 61 1e-09
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 1e-09
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 1e-09
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 1e-09
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 1e-09
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 1e-09
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 60 2e-09
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 2e-09
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 60 2e-09
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 60 2e-09
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 59 3e-09
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 59 3e-09
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 59 3e-09
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 59 3e-09
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 59 3e-09
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 59 3e-09
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 59 3e-09
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 4e-09
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 4e-09
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 4e-09
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 59 4e-09
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 5e-09
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 59 5e-09
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 5e-09
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 58 6e-09
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 58 7e-09
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 7e-09
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 58 8e-09
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 58 9e-09
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 58 9e-09
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 1e-08
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 57 1e-08
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 1e-08
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 1e-08
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 57 1e-08
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 57 2e-08
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 57 2e-08
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 57 2e-08
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 2e-08
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 56 2e-08
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 56 2e-08
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 3e-08
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 56 3e-08
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 56 3e-08
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 56 3e-08
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 3e-08
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 56 3e-08
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 56 3e-08
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 56 3e-08
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 56 3e-08
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 4e-08
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 4e-08
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 4e-08
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 4e-08
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 55 4e-08
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 55 4e-08
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 4e-08
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 55 4e-08
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 55 5e-08
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 55 5e-08
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 55 5e-08
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 55 5e-08
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 6e-08
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 6e-08
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 7e-08
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 7e-08
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 7e-08
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 55 8e-08
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 54 8e-08
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 54 8e-08
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 54 1e-07
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 54 1e-07
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 54 1e-07
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 54 1e-07
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 1e-07
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 54 1e-07
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:... 54 1e-07
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 54 1e-07
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 54 1e-07
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 1e-07
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 54 1e-07
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 1e-07
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 54 1e-07
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 1e-07
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 2e-07
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 54 2e-07
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 54 2e-07
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 2e-07
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 53 2e-07
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 53 2e-07
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 53 2e-07
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 2e-07
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 53 2e-07
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 53 2e-07
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 53 2e-07
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 2e-07
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 53 2e-07
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 53 3e-07
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 3e-07
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 3e-07
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 52 3e-07
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 4e-07
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 52 4e-07
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 52 5e-07
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 52 5e-07
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 52 5e-07
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 52 5e-07
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 5e-07
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 52 5e-07
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 52 5e-07
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 6e-07
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 52 6e-07
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 6e-07
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 52 6e-07
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 52 6e-07
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 51 7e-07
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 51 7e-07
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 7e-07
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 51 8e-07
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 51 8e-07
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 51 8e-07
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 8e-07
Medtr5g006420.1 | organelle transcript processing protein, putat... 51 9e-07
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 51 9e-07
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 1e-06
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 51 1e-06
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 51 1e-06
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 1e-06
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 1e-06
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 1e-06
Medtr4g023520.1 | PPR repeat protein | LC | chr4:7956288-7959311... 51 1e-06
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 51 1e-06
Medtr3g117150.1 | organelle transcript processing protein, putat... 50 1e-06
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 50 1e-06
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 50 1e-06
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 1e-06
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 1e-06
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 2e-06
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 50 2e-06
Medtr1g059720.1 | organelle transcript processing protein, putat... 50 2e-06
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 50 2e-06
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 50 2e-06
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 3e-06
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 49 3e-06
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 49 3e-06
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 49 4e-06
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 49 4e-06
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 48 6e-06
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 48 8e-06
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 48 8e-06
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 48 9e-06
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 48 9e-06
>Medtr7g082550.1 | PPR containing plant-like protein | HC |
chr7:31648795-31646693 | 20130731
Length = 487
Score = 283 bits (723), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 162/211 (76%), Gaps = 7/211 (3%)
Query: 18 PTFCLINQIFRPFSFQKLTPRRENKELANAPRILNLVSPKKSAYDIKNRRSHLRLIEDML 77
PTF NQIFRPFSF +L P+ NK+L NA RIL LVSPKK+ DI+NRRSHLRL+ED+L
Sbjct: 14 PTFHHKNQIFRPFSFYRLGPKNTNKDLTNALRILKLVSPKKTVTDIENRRSHLRLVEDIL 73
Query: 78 ENSASNPVGSNLATLRTTTEMSSVIEQE--LGVDVCFLSHAVSSCGSKRDLYGGVQYHCL 135
EN+ +NP+GSNL T+ T SSV+E E LG+DVCFLSHA+S CGSKRD YGG+QYHCL
Sbjct: 74 ENTTTNPLGSNLKTVTETILESSVLEMEQGLGIDVCFLSHALSLCGSKRDFYGGIQYHCL 133
Query: 136 AITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMC 195
AI GFIANVYVGSSLISLYSRC LLGDAYRVF+EM RNVVS T IIAGFAQEWRVDMC
Sbjct: 134 AIRIGFIANVYVGSSLISLYSRCGLLGDAYRVFDEMSVRNVVSWTAIIAGFAQEWRVDMC 193
Query: 196 LELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
LELF + ++F + LLS C
Sbjct: 194 LELFRRMRGLELKP-----NYFTYTSLLSAC 219
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C L G HC I GF ++V ++LI++YS+C ++ DA +FE M ++V
Sbjct: 216 LSACMGSGALGHGRGVHCQIIQMGFHCYLHVENALIAMYSKCGVIVDALYIFENMVSKDV 275
Query: 177 VSRTVIIAGF 186
V+ +I G
Sbjct: 276 VTWNSMIVGM 285
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D LS +S+C + LY G + HC + FI++ +V S+LI +YS+C L A VF
Sbjct: 580 DSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVF 639
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
+ M +N VS IIA + R CL+LFH ++ I H FLV++S C
Sbjct: 640 DMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQP-----DHVTFLVIMSAC 692
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 110 VCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFE 169
VC LS C ++ + G+Q H L I +GF ++ V +++I++YS+C L DA ++F+
Sbjct: 282 VCLLS----VCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFD 337
Query: 170 EMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
MP+ + V+ +IAG+ Q D + LF
Sbjct: 338 IMPQTDTVTWNGLIAGYVQNGFTDEAVALF 367
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ SC S DL G Q H A G+ ++++V S+LI +YS+C L DA ++F+E+PERNV
Sbjct: 93 IKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNV 152
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHL 203
VS T +I+G+ Q R + LF L
Sbjct: 153 VSWTSMISGYVQNERAREAVFLFKEFL 179
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ SC S DL G Q H A G+ ++++V S+LI +YS+C L DA ++F+E+PERNV
Sbjct: 93 IKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNV 152
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHL 203
VS T +I+G+ Q R + LF L
Sbjct: 153 VSWTSMISGYVQNERAREAVFLFKEFL 179
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
++ C +KR G + H I T ++ +V++ + LI LY++C LGDA+ VF+EMPERNV
Sbjct: 47 LNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNV 106
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRIL 230
VS T +I+ ++Q L LF L+ + F F +L+ CT L
Sbjct: 107 VSWTAMISAYSQRGYASQALNLFLQMLRSGTEP-----NEFTFATVLTSCTSSL 155
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
++SC S G Q H L I + +V+VGSSL+ +Y++ + +A VFE +PER+V
Sbjct: 148 LTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDV 207
Query: 177 VSRTVIIAGFAQEWRVDMCLELF 199
VS T II+G+AQ + LELF
Sbjct: 208 VSCTAIISGYAQLGLDEEALELF 230
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 112 FLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEM 171
+S +S+C L G H LA+ N++VGS+L+ +Y +C + +A +VF E+
Sbjct: 312 MISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSEL 371
Query: 172 PERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
PERN+V+ +I G+A + +DM L LF + H + S+ + +LS C+R+
Sbjct: 372 PERNLVTWNAMIGGYAHQGDIDMALRLFE-EMTLGSHGIRP--SYVTLISILSVCSRV 426
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H LA+ G I +V+VG S +Y + GDA +F+EMP+RN+ + I+ Q
Sbjct: 127 GKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQ 186
Query: 189 EWR 191
+ R
Sbjct: 187 DRR 189
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 56/90 (62%)
Query: 118 SSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVV 177
S+CG +D+ G + H L + GF +N+YV ++L+ +Y++C L DA+RVFE + E N V
Sbjct: 146 SACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEV 205
Query: 178 SRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
+ T ++ G +Q +V LELF L+ I
Sbjct: 206 TFTTMMGGLSQTNQVKEGLELFRLMLRKGI 235
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
SSC L+ G Q H I G++ NV+VGSSL+ +Y +C +G A F+ MP +N+
Sbjct: 526 ASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNI 585
Query: 177 VSRTVIIAGFAQ 188
V+ +I G+A
Sbjct: 586 VTWNEMIHGYAH 597
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+SSC L G Q H ++ GF +VYV SSLI++YS+C + + VF ++ E +V
Sbjct: 425 LSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDV 484
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
V +IAGF+ L F ++ S F F + S C ++
Sbjct: 485 VCWNSMIAGFSINSLEQDALACFKRMRQFGFFP-----SEFSFATIASSCAKL 532
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
+VC S +S+CG+ + L G+Q+H L++ G N++ GSSLI +YS+C + DA +++
Sbjct: 444 EVCMAS-ILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIY 502
Query: 169 EEMPERNVVSRTVIIAGFA 187
MPE +VVS +IAG+A
Sbjct: 503 SCMPEWSVVSMNALIAGYA 521
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 133 HCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRV 192
H A+ GF ++VYV SSLI++Y +C +L DA +VF+ + +RNVV I+ +AQ +
Sbjct: 265 HGEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGCL 324
Query: 193 DMCLELFHPHL-------KYSIHTLLSIISHFPFL 220
+ELF + +++ ++LS + F FL
Sbjct: 325 SDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFL 359
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP-ERNVV 177
+C L G + H L TGF + S+L+ +Y++C + A +VFEE+P +++V+
Sbjct: 656 ACALLSSLQDGQEIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSAAKVFEELPIKKDVI 715
Query: 178 SRTVIIAGFAQEWRVDMCLELF 199
S +I GFA+ + L++F
Sbjct: 716 SWNSMIVGFAKNGYAERALKVF 737
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%)
Query: 105 ELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDA 164
E+ D + + +C D G+Q HCLAI GF ++V G++L+ +YS C L A
Sbjct: 165 EIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHA 224
Query: 165 YRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ +F EMPERN V + +IAG+ + R L+L+
Sbjct: 225 FNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLY 259
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
V +C K+ L G++ H I +G + +VGS++I +Y +C +L +A ++ E + ER
Sbjct: 480 VKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTT 539
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
VS II+GF+ E + + L F L+ + I +F + +L C +
Sbjct: 540 VSWNSIISGFSSEKQGENALSYFSRMLQVGV-----IPDNFTYATVLDICANL 587
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%)
Query: 106 LGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAY 165
L D LS A+++C + + G+Q H LA+ G N+ V ++++ +Y++C L +A
Sbjct: 368 LDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEAC 427
Query: 166 RVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
+F++M ++ VS IIA Q V+ L LF L+ ++
Sbjct: 428 LIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTM 469
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
SH C + + + G Q H TGF+ V+V + L+ Y +C L A+ VF++MP
Sbjct: 41 FSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMP 100
Query: 173 ERNVVSRTVIIAGFA 187
+R+V+S +I G+A
Sbjct: 101 QRDVISWNTMIFGYA 115
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 160
++++ +GV + A SC G Q H A+ T F + VG++ + +Y++C
Sbjct: 262 MLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDR 321
Query: 161 LGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ DA +VF P S +I G+A++ +V LE+F
Sbjct: 322 MVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIF 360
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%)
Query: 105 ELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDA 164
E+ D + + +C D G+Q HCLAI GF ++V G++L+ +YS C L A
Sbjct: 165 EIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHA 224
Query: 165 YRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ +F EMPERN V + +IAG+ + R L+L+
Sbjct: 225 FNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLY 259
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
V +C K+ L G++ H I +G + +VGS++I +Y +C +L +A ++ E + ER
Sbjct: 480 VKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTT 539
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
VS II+GF+ E + + L F L+ + I +F + +L C +
Sbjct: 540 VSWNSIISGFSSEKQGENALSYFSRMLQVGV-----IPDNFTYATVLDICANL 587
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%)
Query: 106 LGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAY 165
L D LS A+++C + + G+Q H LA+ G N+ V ++++ +Y++C L +A
Sbjct: 368 LDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEAC 427
Query: 166 RVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
+F++M ++ VS IIA Q V+ L LF L+ ++
Sbjct: 428 LIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTM 469
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
SH C + + + G Q H TGF+ V+V + L+ Y +C L A+ VF++MP
Sbjct: 41 FSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMP 100
Query: 173 ERNVVSRTVIIAGFA 187
+R+V+S +I G+A
Sbjct: 101 QRDVISWNTMIFGYA 115
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 160
++++ +GV + A SC G Q H A+ T F + VG++ + +Y++C
Sbjct: 262 MLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDR 321
Query: 161 LGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ DA +VF P S +I G+A++ +V LE+F
Sbjct: 322 MVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIF 360
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ S+ + D+ G Q H +A+ TG +VYVGSSL+++Y + + DA ++F+ MP
Sbjct: 121 LAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMP 180
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFH 200
ERN VS +I+G+A D +E+F
Sbjct: 181 ERNTVSWATMISGYASSDIADKAVEVFE 208
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Query: 91 TLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSS 150
L +M VI EL ++ + +C S L G Q H I GF V +GS+
Sbjct: 407 NLYGKMQMERVIPNEL-----TMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSA 461
Query: 151 LISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTL 210
L ++Y++C L D Y +F MP R+V+S +I+G +Q + LELF L I
Sbjct: 462 LSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKP- 520
Query: 211 LSIISHFPFLVLLSHCTRI 229
F+ LLS C+ +
Sbjct: 521 ----DPVTFVNLLSACSHM 535
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ +S+ S +Y G Q H LAI G +A V V ++L+++Y++C L DA R FE
Sbjct: 222 LTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSG 281
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
++N ++ + ++ G+AQ D L+LF+ +H+ + S F + +++ C+ +
Sbjct: 282 DKNSITWSAMVTGYAQGGDSDKALKLFNK-----MHSSGVLPSEFTLVGVINACSDL 333
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L +++C + G Q H A GF +YV S+++ +Y++C L DA + FE +
Sbjct: 323 LVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQ 382
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ +VV T II G+ Q + L L+
Sbjct: 383 QPDVVLWTSIITGYVQNGDYEGGLNLY 409
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Query: 112 FLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEM 171
+S +S+C L G H LA+ N++VGS+L+ LY +C + +A +VF E+
Sbjct: 312 MISSVLSACAELGGLELGRSVHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVFSEL 371
Query: 172 PERNVVSRTVIIAGFAQEWRVDMCLELFHP------HLKYSIHTLLSIIS 215
PE N+V+ +I G+A + +DM L LF ++ S TL+SI+S
Sbjct: 372 PESNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSRGIRPSYVTLVSILS 421
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H LA+ G I +V+VG S +Y + GDA +F+EMP RN+ + I+ Q
Sbjct: 127 GKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYISNAVQ 186
Query: 189 EWR 191
+ R
Sbjct: 187 DRR 189
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 79/145 (54%), Gaps = 12/145 (8%)
Query: 86 GSNLATLRTTTEMSSVIEQELGV--DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIA 143
G + ++T ++M Q+ G+ D L +SSC + L G Q+H A+T+G I+
Sbjct: 355 GYSEEAVKTFSDM-----QKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLIS 409
Query: 144 NVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHL 203
+ V ++L++LY +C + D++R+F E+ ++ V+ T +++G+AQ + + + LF L
Sbjct: 410 FITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESML 469
Query: 204 KYSIHTLLSIISHFPFLVLLSHCTR 228
+ + F+ +LS C+R
Sbjct: 470 AHGLKP-----DKVTFIGVLSACSR 489
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 104 QELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGD 163
+ L +D +++CG L G Q H I T + N++V S+L+ +Y +C +
Sbjct: 269 ENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKS 328
Query: 164 AYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSIIS 215
A VF++M +NVVS T ++ G+ Q + ++ F KY I TL S+IS
Sbjct: 329 AEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVIS 384
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H + GF++ V+VGS L+ +YS+ ++ A +VF+E+PE+NVV +I G +
Sbjct: 162 GRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMR 221
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHF 217
RV+ LF + + S+I+ F
Sbjct: 222 CGRVEDSKRLFFEMRERDSISWTSMITGF 250
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 79/145 (54%), Gaps = 12/145 (8%)
Query: 86 GSNLATLRTTTEMSSVIEQELGV--DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIA 143
G + ++T ++M Q+ G+ D L +SSC + L G Q+H A+T+G I+
Sbjct: 355 GYSEEAVKTFSDM-----QKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLIS 409
Query: 144 NVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHL 203
+ V ++L++LY +C + D++R+F E+ ++ V+ T +++G+AQ + + + LF L
Sbjct: 410 FITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESML 469
Query: 204 KYSIHTLLSIISHFPFLVLLSHCTR 228
+ + F+ +LS C+R
Sbjct: 470 AHGLKP-----DKVTFIGVLSACSR 489
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 104 QELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGD 163
+ L +D +++CG L G Q H I T + N++V S+L+ +Y +C +
Sbjct: 269 ENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKS 328
Query: 164 AYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSIIS 215
A VF++M +NVVS T ++ G+ Q + ++ F KY I TL S+IS
Sbjct: 329 AEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVIS 384
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H + GF++ V+VGS L+ +YS+ ++ A +VF+E+PE+NVV +I G +
Sbjct: 162 GRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMR 221
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHF 217
RV+ LF + + S+I+ F
Sbjct: 222 CGRVEDSKRLFFEMRERDSISWTSMITGF 250
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 79/145 (54%), Gaps = 12/145 (8%)
Query: 86 GSNLATLRTTTEMSSVIEQELGV--DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIA 143
G + ++T ++M Q+ G+ D L +SSC + L G Q+H A+T+G I+
Sbjct: 364 GYSEEAVKTFSDM-----QKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLIS 418
Query: 144 NVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHL 203
+ V ++L++LY +C + D++R+F E+ ++ V+ T +++G+AQ + + + LF L
Sbjct: 419 FITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESML 478
Query: 204 KYSIHTLLSIISHFPFLVLLSHCTR 228
+ + F+ +LS C+R
Sbjct: 479 AHGLKP-----DKVTFIGVLSACSR 498
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 104 QELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGD 163
+ L +D +++CG L G Q H I T + N++V S+L+ +Y +C +
Sbjct: 278 ENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKS 337
Query: 164 AYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSIIS 215
A VF++M +NVVS T ++ G+ Q + ++ F KY I TL S+IS
Sbjct: 338 AEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVIS 393
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H + GF++ V+VGS L+ +YS+ ++ A +VF+E+PE+NVV +I G +
Sbjct: 171 GRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMR 230
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHF 217
RV+ LF + + S+I+ F
Sbjct: 231 CGRVEDSKRLFFEMRERDSISWTSMITGF 259
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 79/145 (54%), Gaps = 12/145 (8%)
Query: 86 GSNLATLRTTTEMSSVIEQELGV--DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIA 143
G + ++T ++M Q+ G+ D L +SSC + L G Q+H A+T+G I+
Sbjct: 364 GYSEEAVKTFSDM-----QKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLIS 418
Query: 144 NVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHL 203
+ V ++L++LY +C + D++R+F E+ ++ V+ T +++G+AQ + + + LF L
Sbjct: 419 FITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESML 478
Query: 204 KYSIHTLLSIISHFPFLVLLSHCTR 228
+ + F+ +LS C+R
Sbjct: 479 AHGLKP-----DKVTFIGVLSACSR 498
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 104 QELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGD 163
+ L +D +++CG L G Q H I T + N++V S+L+ +Y +C +
Sbjct: 278 ENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKS 337
Query: 164 AYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSIIS 215
A VF++M +NVVS T ++ G+ Q + ++ F KY I TL S+IS
Sbjct: 338 AEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVIS 393
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H + GF++ V+VGS L+ +YS+ ++ A +VF+E+PE+NVV +I G +
Sbjct: 171 GRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMR 230
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHF 217
RV+ LF + + S+I+ F
Sbjct: 231 CGRVEDSKRLFFEMRERDSISWTSMITGF 259
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +CG+ L G + HC ++ G +VYVGS+LI +Y+ C + + F+EMP RN+
Sbjct: 242 IPACGNISALTHGKEIHCFSLRKGIFDDVYVGSALIDMYANCGRIRLSQNCFDEMPFRNL 301
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTR 228
VS I++G+A + +E+FH L+ F +LS CT+
Sbjct: 302 VSWNSIMSGYAMHGKAKETIEMFHMMLQSGQKP-----DSITFTSVLSACTQ 348
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D +S + G+ D+ G Q H I G ++ YV S+L+ +Y RC + RVF
Sbjct: 98 DGSTVSCVLPGVGNLEDVLMGKQVHGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVF 157
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELFHP----HLKYSIHTLLSIIS 215
+E+ + + S + G ++ VD L++F L+ ++ T SII+
Sbjct: 158 DEIDQTEIGSLNAFLTGLSRNGLVDTALDVFKKFKAGELELNVVTWTSIIA 208
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 120 CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSR 179
CG DL G++ H + I GF +N++ +S+++LY++C + DAY++F MPER++V
Sbjct: 145 CGENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFVRMPERDLVCW 204
Query: 180 TVIIAGFAQEWRVDMCLEL 198
++AG+AQ L+L
Sbjct: 205 NTVVAGYAQNGFARKALKL 223
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 133 HCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRV 192
H LAI T NV+V ++L+ +Y++C + A +F+ M ER+V++ +I G+
Sbjct: 461 HGLAIRTNMDTNVFVATALVDMYAKCGAIETARELFDMMQERHVITWNAMIDGYGTHGLG 520
Query: 193 DMCLELF-----HPHLKYSIHTLLSIIS 215
L+LF LK + T LS+IS
Sbjct: 521 KAALDLFDDMQNEASLKPNDITFLSVIS 548
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 93 RTTTEMSSVIEQELGVDVCF-LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSL 151
R T + + + G+ CF + SCG + G + HC A GF +N +V +SL
Sbjct: 92 RDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSL 151
Query: 152 ISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGF 186
I +YS+ + DAY+VF EM ERNVV T II G+
Sbjct: 152 IDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGY 186
>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
| 20130731
Length = 596
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A SCG L HC A+ T + +++VGSS+I +Y++C + A+ VF+EMP RN
Sbjct: 127 ATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRN 186
Query: 176 VVSRTVIIAGFAQEWRVDMCLELF 199
VVS + +I G+ Q D L LF
Sbjct: 187 VVSWSGLIYGYVQLGEDDESLRLF 210
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 160
V E+ GV+ LS + CG L G H L+ T F ++ +V SSLISLYS+C +
Sbjct: 215 VEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGV 274
Query: 161 LGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ +AY VFEE+ RN+ ++ AQ D ELF
Sbjct: 275 VEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELF 313
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 87 SNLATLRTTTEMSSVIEQELGV--DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIAN 144
+ L R E+ + +E G D L + +CG DL G + G N
Sbjct: 194 AKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVN 253
Query: 145 VYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFH 200
Y+GS+LIS+YS+C L + R+F+ MP R+ ++ I+ +AQ D + LFH
Sbjct: 254 SYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFH 309
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 104 QELGVD--VCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALL 161
+E GVD L+ +S+C S L G Q A G +++V ++LI +Y++C L
Sbjct: 312 KENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSL 371
Query: 162 GDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
A RVF +MP +N S +I+ A + L LF
Sbjct: 372 ESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLF 409
>Medtr5g024100.1 | PPR containing plant-like protein | HC |
chr5:9654442-9656866 | 20130731
Length = 754
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C + G Q H AI +G+ +VY+GSS+I +Y++C + ++ +VF+E + N
Sbjct: 520 ISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNE 579
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
V+ II+G+A + +E+ K + +H FL L+S C+
Sbjct: 580 VTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAP-----NHVTFLALMSACS 625
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 104 QELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGD 163
Q + +D LS + +C DL GVQ H L I G + +V S L++LY+ LGD
Sbjct: 303 QRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGD 362
Query: 164 AYRVFEEMPERNVVSRTVIIAGFAQEWR-VDMCLELFHP 201
++F + ++++V+ +I A+ + C++LF
Sbjct: 363 VEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQE 401
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 131 QYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEW 190
Q H I T +I+ ++ ++L+S YS+ + A+++F++MP RNVV+ T +I+ +
Sbjct: 28 QIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYG 87
Query: 191 RVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
V E+F+ H++ S + F VLL CT
Sbjct: 88 SVSKAFEMFN-HMRVSDER----PNENTFAVLLRACT 119
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 121 GSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRT 180
G +DL G H ++ GF++++ VG+S++S+Y RC GDA +VF+EMP+RNV S
Sbjct: 137 GEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFN 196
Query: 181 VIIAGFAQEWRVDMCL 196
VII+G A +D L
Sbjct: 197 VIISGCAALGNLDYSL 212
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 CGSKRDLYGGVQYHCLAITTGF----IANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
C S G + HC + G ++V++GSSLI +YSR L + RVF++M RN
Sbjct: 243 CDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRN 302
Query: 176 VVSRTVIIAGFAQEWRVDMCLELF 199
+ T +I G+ Q + L LF
Sbjct: 303 IYVWTAMINGYVQNGAPEGALILF 326
>Medtr7g103230.1 | PPR containing plant-like protein | HC |
chr7:41735375-41738881 | 20130731
Length = 970
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 51/83 (61%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+++C +L G+Q H I TG++ +V+V ++L+ YS+C +A++VF+EMPER++
Sbjct: 172 LTACTRILNLQFGLQLHAAVIKTGYLKSVFVSNALMLFYSKCGFYKNAFKVFDEMPERDI 231
Query: 177 VSRTVIIAGFAQEWRVDMCLELF 199
S +++ QE+ D LF
Sbjct: 232 ASWNTVMSCAVQEFMYDDVFRLF 254
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%)
Query: 88 NLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYV 147
N L+ ++E+ + + LS +++C D Q H AI GF +NV+V
Sbjct: 377 NAEGLKAVELFIRMVEEGVELTDFSLSSGINACSLLADYRVSRQMHGFAIKFGFGSNVFV 436
Query: 148 GSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFH 200
+L+ +Y+RC + DA +++EE+ E + V T ++ G+A+ + LFH
Sbjct: 437 EGALLDMYTRCGRMVDAEKMWEELEEVSSVVWTSMMCGYARNGQPREAFSLFH 489
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%)
Query: 103 EQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLG 162
E +L +D L+ +S CG+ G Q HC + GF +NV VG+ ++ +Y +C +
Sbjct: 494 EWKLIMDEVALTSMLSLCGTVGYHDMGKQIHCQVLKFGFHSNVQVGNVVVEMYFKCGNVD 553
Query: 163 DAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
DA ++F M ++VS +I+G+ + D LE++
Sbjct: 554 DAIKMFSGMASTDIVSWNTLISGYLTHRQGDRALEIW 590
>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:36572831-36570446 | 20130731
Length = 700
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+ A++SC DL G H I G VY G+SL+ +YS+C +GDA VF+ +
Sbjct: 331 FTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGIC 390
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTR 228
E+NVVS +I G AQ L LF L+ + + LLS C+R
Sbjct: 391 EKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVES-----DEITLTGLLSACSR 441
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 106 LGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANV--YVGSSLISLYSRCALLGD 163
+G+ L +S+ D Y G+Q HC GF + +V +SL++ Y+ C +GD
Sbjct: 221 VGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGD 280
Query: 164 AYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
A +VF E +NVV T ++ G + LE+F +++++
Sbjct: 281 ACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNV 324
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 106 LGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLG--D 163
L VD+ ++ +++ +DL GG+Q+H I +GF N +VGS LI LYS+CA G +
Sbjct: 239 LEVDMFTMASVLTAFTCLKDLAGGMQFHGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLE 298
Query: 164 AYRVFEEMPERNVVSRTVIIAGFAQEWRVDMC 195
+VFEE+P+ ++V +I+GF+Q D+C
Sbjct: 299 CMKVFEEIPKPDLVLWNTMISGFSQ--HEDLC 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIAN-VYVGSSLISLYSRCALLGDAYRV 167
D C +S+C + G Q H LAI + N V V ++ +++YS+C L DA R+
Sbjct: 346 DDCSFVCVISACSNLSSPSVGKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDARRI 405
Query: 168 FEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
F+ MPE+N VS +IAG+AQ L+LF L+ I + ++ F+ +LS C
Sbjct: 406 FDTMPEQNTVSLNSMIAGYAQHGAEIESLQLFELMLQEKI-----VPNNITFISVLSACA 460
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
AVSS G + G+ H + G + V +G++LI++YSRC L+ + +VF+EMPERN
Sbjct: 191 AVSSLGV---IELGIWVHSFIVRMGIVMTVPLGTALINMYSRCGLIDRSVKVFDEMPERN 247
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFH 200
VV+ T +I G A R L++F+
Sbjct: 248 VVTWTALINGLAVHGRSREALKVFY 272
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 129 GVQYHCLAITTGFI-ANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFA 187
G+ H LA GF N VGSS +SLYSRC + DA +VF+E+P R+VV+ T ++ G+
Sbjct: 129 GMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYV 188
Query: 188 QEWRVDMCLE 197
Q +M LE
Sbjct: 189 QNGESEMGLE 198
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C L G + H GF N+ +G++L+ +Y++C L + VF+ M E++V
Sbjct: 523 LSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDV 582
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ +I+G+ + +E+F+ + ++ + FL LLS C
Sbjct: 583 ICWNAMISGYGMNGYAESAIEIFNLMEESNVKP-----NEITFLSLLSACA 628
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 54 VSPKKSAYDIKNRRSHLRLIEDMLENSASNPVGSNLATLRTTTEMSSVIEQELGVDVC-- 111
+ K A+ R I D++ A N + S A E +V + L +C
Sbjct: 230 LGDSKKAFGFMERMQKEGFIPDVV---AWNALISGFAQNHQFRETFTVFREMLVSGICPN 286
Query: 112 --FLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFE 169
++ + +CGS + G + H GF ANV++ S+LI +YS+C L DA VF+
Sbjct: 287 QVTIAALLPACGSVGSVKWGREVHGFICRKGFDANVFIASALIDMYSKCGSLKDARNVFD 346
Query: 170 EMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
++ +NV S +I F + VD LELF + + + F +LS C+
Sbjct: 347 KIQCKNVASWNAMIDCFGKCGMVDSALELFTKMKEEGLQP-----NEVTFACILSACS 399
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C D+ G Q H + G + +V +G+ LI +Y +C + A RVF+ M ER+V
Sbjct: 123 IKTCVGLMDMKKGKQVHGMICEMGLMNDVLIGNGLIDMYGKCGSVDYACRVFDGMSERDV 182
Query: 177 VSRTVIIAGFAQEWRVDMCLELFH 200
S T +I GF R++ L LF
Sbjct: 183 ASWTSMICGFCNTGRIEEALVLFE 206
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 114 SHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPE 173
S +++C + G Q H AI GF+++++ +SL+++Y++C + DA R F E+P+
Sbjct: 492 SSLLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQ 551
Query: 174 RNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSII 214
R +VS + +I G AQ L +F+ LK + TL+S++
Sbjct: 552 RGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVL 596
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 68/124 (54%), Gaps = 9/124 (7%)
Query: 113 LSHAVSSCGSK--RDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEE 170
LS A+ +C + +DL G Q H ++ ++++V LI LYS+C ++ DA R ++
Sbjct: 288 LSSALKACAAMGLKDL--GRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDL 345
Query: 171 MPERN-VVSRTVIIAGFAQ----EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSH 225
MP ++ +++ +I+G++Q E + + EL H ++ ++ TL +++ L +
Sbjct: 346 MPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKV 405
Query: 226 CTRI 229
C +I
Sbjct: 406 CKQI 409
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
LS + S S + + Q H L+I G ++ YV +SL+ Y +C+ + +A ++FEE
Sbjct: 390 LSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERT 449
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
++V+ T +I ++Q + L+L+
Sbjct: 450 WEDLVAYTSMITAYSQHGDAEEALKLY 476
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%)
Query: 100 SVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCA 159
S++ L D LS + C D G Q HC + G + +V VG+SL+ +Y +
Sbjct: 83 SLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTE 142
Query: 160 LLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ D RVF+EM ERNVVS T ++AG++ ELF
Sbjct: 143 NVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELF 182
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G+Q H + + GF + V +SLISLYSR +L DA VF++M R+ V+ +IAG+ +
Sbjct: 213 GLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVR 272
Query: 189 EWRVDMCLELFH 200
+ E+F+
Sbjct: 273 NGQDLEVFEIFN 284
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 114 SHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPE 173
S +++C + G Q H AI GF+++++ +SL+++Y++C + DA R F E+P+
Sbjct: 492 SSLLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQ 551
Query: 174 RNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSII 214
R +VS + +I G AQ L +F+ LK + TL+S++
Sbjct: 552 RGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVL 596
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 68/124 (54%), Gaps = 9/124 (7%)
Query: 113 LSHAVSSCGSK--RDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEE 170
LS A+ +C + +DL G Q H ++ ++++V LI LYS+C ++ DA R ++
Sbjct: 288 LSSALKACAAMGLKDL--GRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDL 345
Query: 171 MPERN-VVSRTVIIAGFAQ----EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSH 225
MP ++ +++ +I+G++Q E + + EL H ++ ++ TL +++ L +
Sbjct: 346 MPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKV 405
Query: 226 CTRI 229
C +I
Sbjct: 406 CKQI 409
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
LS + S S + + Q H L+I G ++ YV +SL+ Y +C+ + +A ++FEE
Sbjct: 390 LSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERT 449
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
++V+ T +I ++Q + L+L+
Sbjct: 450 WEDLVAYTSMITAYSQHGDAEEALKLY 476
>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:28350546-28353833 | 20130731
Length = 770
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S +S C L G Q H I TGF+++V VGSS+I++Y++C + A +VF EM
Sbjct: 399 FSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMS 458
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFH 200
R ++ T +I GFAQ L LF
Sbjct: 459 IRTMILWTTMITGFAQHGWSKQALNLFE 486
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 80 SASNPVGSNLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITT 139
SA G + +R EM + E ++ + L+ A+S C + L G+Q H L
Sbjct: 255 SACGEKGEAMKGVRVFVEML-LDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKL 313
Query: 140 GFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G+ +N+ V +SL+ LY +C + +A R+F+ M + N+V+ +IAG AQ
Sbjct: 314 GYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQ 362
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
LS V CG G Q H GF NV+VGSSL+ +Y+RC L ++ VF+E+
Sbjct: 198 LSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELE 257
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
+N VS +I+GFA++ + L LF
Sbjct: 258 SKNEVSWNALISGFARKGEGEEALGLF 284
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+++ G +L G++ H AI G +N+++G+SLI +Y +C + FE MPE+++
Sbjct: 359 IAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDL 418
Query: 177 VSRTVIIAGFAQ 188
+S T IIAG+AQ
Sbjct: 419 ISWTTIIAGYAQ 430
>Medtr8g035960.1 | PPR containing plant-like protein | HC |
chr8:13156718-13159093 | 20130731
Length = 791
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 99 SSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRC 158
+++ + + +D L+ A+S+CG ++L G Q H LA G+ +V V + LIS YS+C
Sbjct: 279 GNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKC 338
Query: 159 ALLGDAYRVFEEMPERNVVSRTVIIA 184
+L DA VF++M RNVVS T +I+
Sbjct: 339 KVLRDAKAVFQDMSARNVVSWTTLIS 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G+Q H L + GF V++G++L+++YSR L +A RVF EM R++VS +++G+AQ
Sbjct: 206 GLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQ 265
Query: 189 E 189
E
Sbjct: 266 E 266
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+S+C DL GVQ H L + + +VY+GS+L+ +YS+C ++ A R F++M RN
Sbjct: 157 ALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRN 216
Query: 176 VVSRTVIIAGFAQEWRVDMCLELF 199
+VS +I + Q LE+F
Sbjct: 217 IVSWNSLITCYEQNGPAGKALEVF 240
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFI------ANVYVGSSLISLYSRCALLGDAYRVFEE 170
+++C + DL G Q H + GF ++++VG+SLI +Y +C L+ D VFE
Sbjct: 392 LNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFER 451
Query: 171 MPERNVVSRTVIIAGFAQEWRVDMCLELFHPHL 203
M ER+ VS +I G+AQ LE+F L
Sbjct: 452 MLERDNVSWNAMIVGYAQNGYGTEALEIFREML 484
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAIT-TGFIANVYVGSSLISLYSRCALLGDAYRV 167
D L+ S+C S + G+Q H + + ++ +G++L+ +Y++C + +A V
Sbjct: 251 DEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLV 310
Query: 168 FEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHF 217
F+ MP R+VVS T +++G+A+ V +F ++ ++ + ++I+ +
Sbjct: 311 FDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGY 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 109 DVCFLSHA-----VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGD 163
D+ FL + + +C + ++ H I T F + +++ + L+ +Y +C L D
Sbjct: 13 DLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLED 72
Query: 164 AYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
A +VF+ M +RN S ++ + +D L LF
Sbjct: 73 ARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLF 108
>Medtr8g479320.2 | PPR containing plant-like protein | HC |
chr8:33809079-33805443 | 20130731
Length = 498
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 86 GSNLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANV 145
S L + + M+ +IE+ +C +A+SSC + + G+Q H I +G+ N+
Sbjct: 25 ASTCQALESLSRMNGLIEKPTKYVLC---NALSSCAKTLNWHLGIQIHAYMIRSGYEDNL 81
Query: 146 YVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKY 205
++ S+L+ Y++C + DA ++F M + + VS T +IAGF+ + L LF L
Sbjct: 82 FLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGT 141
Query: 206 SIH----TLLSIIS 215
I TL S+I+
Sbjct: 142 QIRPNCFTLTSVIN 155
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
LS +S+C S L G Q H L I G NVYV S+LI +YS+ + +A V ++
Sbjct: 252 LSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTS 311
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
++N V T +I G+AQ R LELF Y + I H F +L+ C
Sbjct: 312 KKNTVLWTSMIMGYAQCGRGLEALELF----DYLLTKKELIPDHVCFTAVLTAC 361
>Medtr8g479320.1 | PPR containing plant-like protein | HC |
chr8:33809124-33805421 | 20130731
Length = 498
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 86 GSNLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANV 145
S L + + M+ +IE+ +C +A+SSC + + G+Q H I +G+ N+
Sbjct: 25 ASTCQALESLSRMNGLIEKPTKYVLC---NALSSCAKTLNWHLGIQIHAYMIRSGYEDNL 81
Query: 146 YVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKY 205
++ S+L+ Y++C + DA ++F M + + VS T +IAGF+ + L LF L
Sbjct: 82 FLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGT 141
Query: 206 SIH----TLLSIIS 215
I TL S+I+
Sbjct: 142 QIRPNCFTLTSVIN 155
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
LS +S+C S L G Q H L I G NVYV S+LI +YS+ + +A V ++
Sbjct: 252 LSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTS 311
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
++N V T +I G+AQ R LELF Y + I H F +L+ C
Sbjct: 312 KKNTVLWTSMIMGYAQCGRGLEALELF----DYLLTKKELIPDHVCFTAVLTAC 361
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 103 EQELGVDVCFLSHAVSSCGSKRDLYG---------GVQYHCLAITTGFIANVYVGSSLIS 153
EQ+L +V ++ VSS L G G Q H + + GF ++ V ++LIS
Sbjct: 451 EQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALIS 510
Query: 154 LYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSI 213
+YS+C A +VF +M + NV++ T II GFA+ LELF+ L+ +
Sbjct: 511 MYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKP---- 566
Query: 214 ISHFPFLVLLSHCTRI 229
+ ++ +LS C+ +
Sbjct: 567 -NDVTYIAVLSACSHV 581
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ +S C + L G + H I +G + ++ VG SL+ +Y++C L+ +A +VF+ M
Sbjct: 265 LTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMR 324
Query: 173 ERNVVSRTVIIAGFAQ 188
E NV+S T ++ G+ +
Sbjct: 325 EHNVMSWTALVNGYVR 340
>Medtr6g016020.1 | PPR containing plant-like protein | HC |
chr6:5715947-5718139 | 20130731
Length = 730
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%)
Query: 121 GSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRT 180
G + DL G Q HCL +GF V +SLI +Y RC L A R+FE++P +NVVS
Sbjct: 220 GCEEDLSYGEQVHCLMTKSGFDCYVNAVNSLIGVYVRCRALCSAERLFEQVPVQNVVSWN 279
Query: 181 VIIAGFAQEWRVDMCLELFHPHLK 204
+II + R M LE++ L+
Sbjct: 280 MIIDSMVKNGRSQMALEVYLNMLR 303
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 120 CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSR 179
CG K +L G + H I GF +++ ++ Y +C + DA++VFE + E+++VS
Sbjct: 128 CGKKFELEKGREIHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKVFERLSEKDLVSW 187
Query: 180 TVIIAGFAQEWRVDMCLELFH----PHLKYSIHTLLSII 214
T +IAG+AQ L+LF+ LK TL+SI+
Sbjct: 188 TSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVTLVSIL 226
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 120 CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLG-DAYRVFEEMPERNVVS 178
C +L GG H I +GF + + G++L+S+Y++C L+ DAY VF+ + ++VVS
Sbjct: 156 CARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVS 215
Query: 179 RTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
+IAG A+ + LF +K S+
Sbjct: 216 WNAMIAGLAENGLLKEAFSLFSLMMKGSV 244
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D +S AV +C L G Q H ++ +GF +N+YV SSLI +Y++C + +AY VF
Sbjct: 257 DAFLISSAVCACAGLATLIEGKQVHAISCKSGFGSNIYVTSSLIDMYAKCGCIREAYIVF 316
Query: 169 EEMPERNVVSRTVIIAGFAQ 188
+ R++V +I+GF +
Sbjct: 317 QGEELRSIVLWNAMISGFGR 336
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+S + C K + +Q H +I +N +VG++L+ +Y++C+ + DA ++FE MP
Sbjct: 160 ISSVLCECAFKCAILECMQLHAFSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFESMP 219
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPH 202
E N V+ + I+AG+ Q + L LF +
Sbjct: 220 ETNAVTWSSILAGYVQNGLHEAALLLFRDY 249
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
Query: 120 CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSR 179
C R G H I GF ++ + LI++YS+C+L+ DA VF+EMP ++VVS
Sbjct: 66 CAKSRSSIAGRACHAQFILVGFETDILTSNMLINMYSKCSLVHDARIVFDEMPVKSVVSW 125
Query: 180 TVIIAGFAQEWRVDMCLELFHPHLK----YSIHTLLSIISHFPFLVLLSHCTRI 229
+I + + L LF L+ ++ T+ S++ F + C ++
Sbjct: 126 NTMIGALTRIAKEQEALMLFIQMLREGTLFNEFTISSVLCECAFKCAILECMQL 179
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
AVS+C L G + + AI NV +G++++ +Y+RC + A RVFEEM E++
Sbjct: 118 AVSACAHLGALAAGEKAYEHAIRINLDLNVILGTAIVDMYARCGNVEKAVRVFEEMKEKD 177
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
V+S T +I+G A + LE F+ +K I
Sbjct: 178 VISWTSLISGVAMHGYAEEALEYFYVMVKNGI 209
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q + T F A + +GS+LI +YS+C + DA RVF+ M E+NV S T +I G+ +
Sbjct: 294 GEQVQAQLMKTPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMIDGYGK 353
Query: 189 EWRVDMCLELFHP-HLKYSI 207
D LELF ++YSI
Sbjct: 354 NGFPDEALELFKKMQIEYSI 373
>Medtr4g083630.1 | PPR containing plant-like protein | HC |
chr4:32536076-32533157 | 20130731
Length = 708
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 127 YGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGF 186
Y C + T ++NV+V S+LI +Y++C + DA++VF+ MPERN+VS +I G+
Sbjct: 556 YSSALKACAKLETPALSNVFVNSALIYMYAKCGYIADAFQVFDNMPERNLVSWKAMILGY 615
Query: 187 AQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
A+ L+L Y + ++ + +L+ C I
Sbjct: 616 ARNGHCRKALQLM-----YRMRAEGFVVDDYILTTVLTACGGI 653
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+ +CG + G Q H + ++V++G+SLI +Y++C + + +VF+ M RN
Sbjct: 357 ALKACGENKAFKCGTQLHGAIVKKICKSDVFIGTSLIDMYAKCGEIVSSKKVFDRMKVRN 416
Query: 176 VVSRTVIIAGFAQEWRVDMCLELF 199
+ T II+G+A+ + L F
Sbjct: 417 TATWTSIISGYARNGFGEEALNFF 440
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H + +G + +V+VG++L+ +Y++C + DA +VFE M ++VV+ ++ G++Q
Sbjct: 134 GRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQ 193
Query: 189 EWRVDMCLELF----HPHLKYSIHTLLSIISHFP 218
R + L LF ++ + T S+IS +
Sbjct: 194 NGRFEDALSLFGKMREEKIESDVVTWSSVISGYA 227
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
SC + + G H GF A+ +V +SL+ +YS+C+++ A +VF+EMPER+VVS
Sbjct: 19 SCANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSVIESARKVFDEMPERSVVS 78
Query: 179 RTVIIAGFAQEWRVDMCLELFHPHL----KYSIHTLLSIISHF 217
+I+ + E ++ L L L K S T +SI+S +
Sbjct: 79 WNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSGY 121
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 84 PVGSNLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIA 143
VGS++ ++ EM Q +G+D + VS C R+ H L + G
Sbjct: 194 KVGSSVEAVKLFNEMQ---HQNIGLDFIVFVNLVSGCIQLREQLLASSVHSLVLKCGCHE 250
Query: 144 NVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ + L+++Y+RC L A +F+ + ++V+S T +IAG+A R L+LF
Sbjct: 251 EDSIKNLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEALDLF 306
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C +L G+ H + G N++VG+ LI++Y +C L +A RVF+EM ++V
Sbjct: 126 LKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDV 185
Query: 177 VSRTVIIAGFAQEWRVDMCLEL 198
VS ++AG+A R D LE+
Sbjct: 186 VSWNSMVAGYAHNMRFDDALEI 207
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 140 GFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
G +NV+VGS+LI +YS+C + +AY VF+ M E NV S + +I GFA R ++LF
Sbjct: 273 GSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLF 332
Query: 200 HPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ L+ I +H F+ L + C+
Sbjct: 333 YEMLENGIKP-----NHVTFVGLFTACS 355
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H A GF+ ++YVG+++I +Y + +L A +VF+EMP R+VV+ T +I +A+
Sbjct: 128 GSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYAR 187
Query: 189 EWRVDMCLELF 199
+D ELF
Sbjct: 188 SGDMDSACELF 198
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Query: 91 TLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSS 150
L +EM ++ +Q+ V + + +CG D G Q HCL + F + +V S+
Sbjct: 114 ALEVFSEMQTLNDQKSN-SVFVIPSVLKACGHVGDRIYGEQVHCLVLKCSFEIDAFVSSA 172
Query: 151 LISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQE 189
LI +YS+C + DA +VF+ M +++V+ +++G+AQ+
Sbjct: 173 LIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQ 211
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+S + +C ++ + G + H A+ G ++YV S+L+ +Y++C + +A +F +MP
Sbjct: 306 ISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGFISEARTLFYKMP 365
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
E+N V+ +I G+A + +ELF+ + L H F L+ C+ +
Sbjct: 366 EKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKL----DHLTFTAALTACSHV 418
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+S+C L G Q H A+ TG+ VG++L+ +Y +C +G+AY VFE M ++
Sbjct: 368 ALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKD 427
Query: 176 VVSRTVIIAGFAQ 188
++S ++AG+A+
Sbjct: 428 IISWNTMLAGYAR 440
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 56/97 (57%)
Query: 103 EQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLG 162
+Q + D + A+S+C + L G Q H + +G+ ++ +G++L+SLY+RC +
Sbjct: 580 DQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVR 639
Query: 163 DAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+AY F+++ ++ VS +++GFAQ + L +F
Sbjct: 640 EAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIF 676
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
AVS+ + ++ G Q H + TG+ + V ++LI+LY++C + DA R F EMP++N
Sbjct: 694 AVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDDAERHFFEMPDKN 753
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
+S +I G++Q L+LF + L + +H F+ +LS C+ +
Sbjct: 754 EISWNSMITGYSQHGCGFEALKLFE-----DMKQLDVLPNHVTFVGVLSACSHV 802
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H + TGF NVYV S LI +Y++ L A ++F + E +VVS T +IAG+ Q
Sbjct: 505 GEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQ 564
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
+ L LF I + + F +S C I
Sbjct: 565 HDKFTEALNLFKEMQDQGIKS-----DNIGFASAISACAGI 600
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S +S+C G Q H L + GF + YV ++L++LYSR L A ++F M
Sbjct: 287 FSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMS 346
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
+R+ VS +I+G AQ+ ++ L LF
Sbjct: 347 QRDRVSYNSLISGLAQQGYINRALALF 373
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D ++ +S+C S L G Q+H AI G +++ V SL+ LY +C+ + A+ F
Sbjct: 384 DCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF 443
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
NVV V++ G+ Q ++ ++F
Sbjct: 444 LACETENVVLWNVMLVGYGQLDNLNKSFQIF 474
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 131 QYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEW 190
Q H IT+GF ++ ++ + LI LY + L A +VFE + R+ VS +I+G +Q
Sbjct: 204 QIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNG 263
Query: 191 RVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
+ + LF +HT + + F +LS CT++
Sbjct: 264 YEEEAMLLF-----CQMHTSGICPTPYIFSSVLSACTKV 297
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 15/111 (13%)
Query: 122 SKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTV 181
K D++ G HC + TG + VG LI+LYS C + A VF+++P+RNV+ +
Sbjct: 235 EKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWSA 294
Query: 182 IIA-----GFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
II GFAQE L +F ++ +H + FL LLS C+
Sbjct: 295 IIRCYGMHGFAQE-----ALSMFRQLVELGLH-----LDGIVFLSLLSACS 335
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 49/83 (59%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +CG++RD G H + G +++VG++ ++ Y++C + + +VF+EM ER++
Sbjct: 127 LKACGAERDCLKGRIIHGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRKVFDEMLERDI 186
Query: 177 VSRTVIIAGFAQEWRVDMCLELF 199
VS +++G+ VD + LF
Sbjct: 187 VSWNSMMSGYIANGYVDEAVMLF 209
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+S VSSC LY G H I G +N+ V S+L+ +Y +C + DA +FE MP
Sbjct: 333 ISTVVSSCAKLASLYHGQAVHGKVILMGVDSNMLVSSALVDMYCKCGVPLDARVIFETMP 392
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
+NV+ +I G+AQ + L L+ L+ + + F+ +LS C
Sbjct: 393 IKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKP-----DNISFVGVLSAC 441
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%)
Query: 115 HAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPER 174
+A+ +C D G Q H + F NV+V +++ LY++C + A +F+ M +
Sbjct: 168 NALQACSQLLDFRLGKQIHGRVVVGEFEKNVFVWNAVTDLYAKCGDIDRARWLFDGMVNK 227
Query: 175 NVVSRTVIIAGFAQEWRVDMCLELFH 200
N+VS ++I+G+ + + D C+ F+
Sbjct: 228 NLVSWNLMISGYVKMGKPDECISFFN 253
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 49/80 (61%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S +++CG ++ G Q H + +GF+ N V ++L+ +Y++C + DA VF+ M
Sbjct: 118 FSSVLNACGRVPAVFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMV 177
Query: 173 ERNVVSRTVIIAGFAQEWRV 192
+R+VV+ T +I G+A+ R+
Sbjct: 178 DRDVVAWTAMICGYAKAGRM 197
>Medtr8g063450.1 | PPR containing plant-like protein | HC |
chr8:26602939-26605163 | 20130731
Length = 699
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 46/69 (66%)
Query: 133 HCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRV 192
HCLAI +G I+++Y ++LI+ YS+CA L A ++F++MP+R+ VS +I+G+ +
Sbjct: 22 HCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTADL 81
Query: 193 DMCLELFHP 201
D +L +
Sbjct: 82 DSTWQLLNA 90
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H + I NV+ GS+L+ +Y++C + DA VF MPE N VS +IAG+++
Sbjct: 119 GQQLHSVMIKMRLNENVFSGSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSR 178
Query: 189 EWRVDM------CLELFHPHL-KYSIHTLLSIISHFPF--LVLLSHC 226
+DM C EL + ++ LL+++ F LV+ HC
Sbjct: 179 VGDLDMAFWLMRCQELEGVGIDDGTVSPLLTLLDGVRFYSLVMQLHC 225
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 89 LATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVG 148
L+ R +SSV +E D +S A+ SC R L G H +++VG
Sbjct: 87 LSLFRQMNNVSSVSIEERP-DNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVG 145
Query: 149 SSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
S+LI LY++C + DA +VF E P+ +VV T II+G+ Q ++ L F
Sbjct: 146 SALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFF 196
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 126 LYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAG 185
L V H I GF N ++G+SLI +Y++C+ + DA +VF+ M ++VV+ + IIA
Sbjct: 427 LQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAA 486
Query: 186 FAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ + + L+LF+ +S + ++ F+ +LS C+
Sbjct: 487 YGFHGQGEEALKLFYQMANHSD----TKPNNVTFISILSACS 524
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 89 LATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVG 148
L+ R +SSV +E D +S A+ SC R L G H +++VG
Sbjct: 87 LSLFRQMNNVSSVSIEERP-DNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVG 145
Query: 149 SSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
S+LI LY++C + DA +VF E P+ +VV T II+G+ Q ++ L F
Sbjct: 146 SALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFF 196
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 126 LYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAG 185
L V H I GF N ++G+SLI +Y++C+ + DA +VF+ M ++VV+ + IIA
Sbjct: 427 LQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAA 486
Query: 186 FAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ + + L+LF+ +S + ++ F+ +LS C+
Sbjct: 487 YGFHGQGEEALKLFYQMANHSD----TKPNNVTFISILSACS 524
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 110 VCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFE 169
+ FL+HA C + + G HC+ GF +V+V + L+ +YS L DA +VF
Sbjct: 117 LTFLAHA---CANLDTTHFGFHLHCIVCKMGFENHVFVQTGLLHMYSNWGFLVDAAQVFG 173
Query: 170 EMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
EMP+RN V+ V I+G + +++ +F
Sbjct: 174 EMPDRNTVTWNVFISGLIKWGQLEFARSVF 203
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 89 LATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVG 148
L+ R +SSV +E D +S A+ SC R L G H +++VG
Sbjct: 57 LSLFRQMNNVSSVSIEERP-DNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVG 115
Query: 149 SSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
S+LI LY++C + DA +VF E P+ +VV T II+G+ Q ++ L F
Sbjct: 116 SALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFF 166
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 133 HCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRV 192
H I GF N ++G+SLI +Y++C+ + DA +VF+ M ++VV+ + IIA + +
Sbjct: 404 HAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQG 463
Query: 193 DMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ L+LF+ +S + ++ F+ +LS C+
Sbjct: 464 EEALKLFYQMANHSD----TKPNNVTFISILSACS 494
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 89 LATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVG 148
L+ R +SSV +E D +S A+ SC R L G H +++VG
Sbjct: 57 LSLFRQMNNVSSVSIEERP-DNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVG 115
Query: 149 SSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
S+LI LY++C + DA +VF E P+ +VV T II+G+ Q ++ L F
Sbjct: 116 SALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFF 166
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 133 HCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRV 192
H I GF N ++G+SLI +Y++C+ + DA +VF+ M ++VV+ + IIA + +
Sbjct: 404 HAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQG 463
Query: 193 DMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ L+LF+ +S + ++ F+ +LS C+
Sbjct: 464 EEALKLFYQMANHSD----TKPNNVTFISILSACS 494
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
V C S L+ G H I G + V +SL+ +Y +C L A R F MP +++
Sbjct: 477 VQGCASTGQLHPGKWIHGFVIRNGLRPCILVDTSLVDMYCKCGDLDSAQRCFNLMPSQDL 536
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
VS + IIAG+ + + L L+ L+ I +H FL +LS C+
Sbjct: 537 VSWSAIIAGYGYHGKGETALRLYSKFLETRIKP-----NHVIFLSILSSCS 582
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G H I G + Y+ SSLI+ Y + A +VF+ MPERNVV T +I +++
Sbjct: 88 GNSLHQRVIVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSK 147
Query: 189 EWRVDMCLELF----HPHLKYSIHTLLSI---ISHFPFLVLLSHCT 227
V LF + ++ S TLLS+ +S P++ L C
Sbjct: 148 MGDVREAFSLFRQMRYEGIQPSSVTLLSLLFGVSEVPYVQCLHGCA 193
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 92 LRTTTEMSSVIEQELGVDVCFLSHAVSSCG---SKRDLYGGVQYHCLAITTGFIAN-VYV 147
L+ +E ++E E+ + L +S+C SK + G H A GF N V V
Sbjct: 69 LKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMV 128
Query: 148 GSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
G++LI +Y++C L A VF++M RN+VS +I G+ + VD L+LF
Sbjct: 129 GTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLF 180
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C + L G+ H L + F NV V +SLI +Y+RC + A +VF+ M +RN+
Sbjct: 230 ISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNL 289
Query: 177 VSRTVIIAGFAQEWRVDMCLELF 199
VS II GFA D L F
Sbjct: 290 VSWNSIIVGFAVNGLADKALSFF 312
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 108 VDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRV 167
VD+ ++ +S+C + L G Q H G + YVGSSLI +YS+ L DA +
Sbjct: 381 VDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMI 440
Query: 168 FEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
FE++ E NVV T +I+G A + + LF L I I + F+ +L+ C+
Sbjct: 441 FEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGI-----IPNEVTFVGVLNACS 495
Query: 228 RI 229
+
Sbjct: 496 HV 497
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 5/120 (4%)
Query: 108 VDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRV 167
+D +S ++ C L G Q H + GF ++ S+L++ YS+ + +A V
Sbjct: 323 IDHFTISIVITICARLASLEHGKQGHAALVRRGFGTDLVANSALVNFYSKWGRMENARHV 382
Query: 168 FEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
F++M +N++S +IAG+ R + +E+F L+ ++ +H FL +LS C+
Sbjct: 383 FDKMHRKNIISWNALIAGYGHHGRGEEAIEMFEKMLQENMTP-----NHVTFLAVLSACS 437
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H + + +V +LI +YS+C + DA VF++MP++ V IIAG+A
Sbjct: 243 GRQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQKTTVGWNTIIAGYAF 302
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
+ L ++ Y + + I HF ++++ C R+
Sbjct: 303 RGFSEEALGIY-----YKMRDSGTKIDHFTISIVITICARL 338
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 28/162 (17%)
Query: 70 LRLIEDMLENSASNPVGSNLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGG 129
L L +DML NP + LAT+ + +C DL G
Sbjct: 296 LALYDDMLCIYGLNPTPATLATM------------------------LRACAQLTDLKRG 331
Query: 130 VQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQE 189
+ HC I +G + VG+SLIS+Y++C ++ +A +EM ++ VS + II+G Q
Sbjct: 332 KKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQN 391
Query: 190 WRVDMCLELFHPHLKYSI----HTLLSIISHFPFLVLLSHCT 227
+ L +F I T+++++ L L H T
Sbjct: 392 GYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGT 433
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 97 EMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYS 156
+ S+++ L + LS A+S C D+ G Q H + GF + + +G++L+++YS
Sbjct: 474 KFSALLNTHLKPNAYSLSLALSICSCTPDMDHGKQVHGYILRHGFDSEISLGNALVTMYS 533
Query: 157 RCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFH-----PHLKYSIHTLL 211
+C L + VF EM ER+ ++ II+ ++Q + + F P +K T
Sbjct: 534 KCGFLDRSLSVFNEMVERDTITWNAIISAYSQHGQGKEAVHCFEAMQISPGIKPDHATFT 593
Query: 212 SIISHFPFLVLLSHCTRIL 230
+++S L+ TRI
Sbjct: 594 AVLSACSHSGLVDDATRIF 612
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPE--R 174
+S C L G H + + +GF+ V +SLI++Y C + D Y+VFEEM R
Sbjct: 194 LSLCPLSEGLDYGRHVHSVVVKSGFLDWTSVVNSLITMYFNCGCVVDGYKVFEEMEGGVR 253
Query: 175 NVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
N V+ +I GF R + +F + S+ +S F+ +LS C
Sbjct: 254 NHVTYNAMIDGFVSVERFEDAFLMFRDMHRGSV-----CLSEVTFVSVLSSC 300
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C S L G++ H A+ ++V VGS+L+ +Y++C + A R FE MP RN+
Sbjct: 651 LSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNI 710
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
S +I+G+A+ L++F ++ H F+ +LS C+ +
Sbjct: 711 YSWNSMISGYARHGHGQKALKIFTRMKQHGQSP-----DHVTFVGVLSACSHV 758
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 126 LYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAG 185
LY H TGF +V+ ++LI++Y R L A ++F+EMP++N+VS + +I+G
Sbjct: 39 LYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISG 98
Query: 186 FAQEWRVDMCLELF 199
+ Q D LF
Sbjct: 99 YTQNRMPDEACSLF 112
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
Query: 97 EMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFI-ANVYVGSSLISLY 155
EM ++E V LS K G + H +G + A + +G++L+++Y
Sbjct: 325 EMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMY 384
Query: 156 SRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIIS 215
+C + +A VF+ MP ++ VS +I+G R + + FH + + + S
Sbjct: 385 GKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGM-----VPS 439
Query: 216 HFPFLVLLSHCTRI 229
+F + LS C+ +
Sbjct: 440 NFSVISTLSSCSSL 453
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 114 SHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPE 173
S A++SC D+ G + H L + +G+ +++ V ++LI +Y +C DA +VF+EM
Sbjct: 76 SAAINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNY 135
Query: 174 RNVVSRTVIIAGFAQEWRVDMCLELF 199
N V+ ++ +A R DM E+F
Sbjct: 136 SNEVTWCSLLFAYANTCRFDMAFEIF 161
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S + +C + GV H L TGF +V+V ++++ YS+C L DA++VF++M
Sbjct: 107 FSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMV 166
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
+NVVS T +I G + + ++LF L+ + F + +L C R+
Sbjct: 167 VKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRP-----DGFVIVRVLRACARL 218
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 125 DLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIA 184
D+ G + H A+ GF +V++GSSLI +Y++C L + R F +P ++ +S IIA
Sbjct: 242 DVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIA 301
Query: 185 GFAQEWRVDMCLELFHPHLKYSI 207
G Q D L F LK ++
Sbjct: 302 GCVQNGEFDRGLGFFRRMLKENV 324
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S + +C L G Q H + GF N ++ SSL+ +Y++C + A VF+ +
Sbjct: 331 FSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRID 390
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+R++V+ T II G A + LF L+ + + F+ +L+ C+
Sbjct: 391 KRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPC-----YVAFMAVLTACS 440
>Medtr5g031630.1 | PPR containing plant-like protein, putative | HC
| chr5:13562181-13560603 | 20130731
Length = 504
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ + SCG+ DL G H L + +G + + +SL+++YS+C+++ D+ +VF ++
Sbjct: 93 LASVLVSCGNLGDLVNGKLIHGLVVKSGLESVIASQTSLLTMYSKCSMVEDSIKVFNQLS 152
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLV 221
+ V+ T I G Q R ++ L +F ++ SI +HF +LV
Sbjct: 153 YASHVTCTSFIVGLVQNGREEVALSMFREMIRCSISP-----NHFTYLV 196
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ + SCG+ DL G H L + +G + V +SL+++YS+C ++ D+ +VF +
Sbjct: 206 LASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLA 265
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
+ V+ T I G Q R ++ L +F ++ SI +HF F +L C+ +
Sbjct: 266 YASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISP-----NHFTFSSILHACSSL 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
+C S L G Q H + + G N YV ++LI LY +C + A VFE + E +VVS
Sbjct: 313 ACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVS 372
Query: 179 RTVIIAGFAQEWRVDMCLELF 199
+I +AQ LELF
Sbjct: 373 INTMIYAYAQNGFGHEALELF 393
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 121 GSKRDLYGGVQ---YHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVV 177
G R YGG H + GF+ +V+VG+SLISL+ L +A +VF+EM R+VV
Sbjct: 137 GCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVV 196
Query: 178 SRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIIS 215
S ++ G+ + V+M L LF +I T SII+
Sbjct: 197 SWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIIT 234
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D ++ A+SSC DL G + H + +GF + +V ++L+ +Y +C L A VF
Sbjct: 206 DSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVF 265
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
E+MP + VV+ +I G+ + C++LF
Sbjct: 266 EQMPNKTVVAWNSMINGYGFKGDGISCIQLF 296
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 86 GSNLATLRTTTEMS-SVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIAN 144
G LR EMS S +E D + +++C L G + H L + N
Sbjct: 388 GKLFDALRLFGEMSKSFVEP----DAITFTSVLAACSQLAALEKGREIHNLIVERNLGNN 443
Query: 145 VYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLK 204
V +L+ +Y++C + +A+ VF+ +PER++VS T +I + RV LELF L+
Sbjct: 444 EVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQ 503
Query: 205 YSIHTLLSIISHFPFLVLLSHCT 227
++ FL +LS C+
Sbjct: 504 SNVKP-----DRVTFLAILSACS 521
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +CG R + G H + G + ++ VGSSL+ +Y++C A ++F+EMP+++V
Sbjct: 113 LKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDV 172
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRIL 230
+I+ + Q + + L F ++ I+ +S C R+L
Sbjct: 173 ACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTIT-----TAISSCARLL 221
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D ++ A+SSC DL G + H + +GF + +V ++L+ +Y +C L A VF
Sbjct: 206 DSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVF 265
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
E+MP + VV+ +I G+ + C++LF
Sbjct: 266 EQMPNKTVVAWNSMINGYGFKGDGISCIQLF 296
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 86 GSNLATLRTTTEMS-SVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIAN 144
G LR EMS S +E D + +++C L G + H L + N
Sbjct: 388 GKLFDALRLFGEMSKSFVEP----DAITFTSVLAACSQLAALEKGREIHNLIVERNLGNN 443
Query: 145 VYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLK 204
V +L+ +Y++C + +A+ VF+ +PER++VS T +I + RV LELF L+
Sbjct: 444 EVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQ 503
Query: 205 YSIHTLLSIISHFPFLVLLSHCT 227
++ FL +LS C+
Sbjct: 504 SNVKP-----DRVTFLAILSACS 521
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +CG R + G H + G + ++ VGSSL+ +Y++C A ++F+EMP+++V
Sbjct: 113 LKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDV 172
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRIL 230
+I+ + Q + + L F ++ I+ +S C R+L
Sbjct: 173 ACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTIT-----TAISSCARLL 221
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEM-PERNVVSRTVIIAGFA 187
G Q H +AI +++V VG++LI++YS+ + DA +VF ++ ER+ ++ T +I A
Sbjct: 428 GKQLHAIAIRLKEVSSVSVGNALITMYSKSGCIKDARKVFNQICTERDTLTWTSMIIALA 487
Query: 188 QEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
Q + +ELF LK+++ H ++ +LS CT +
Sbjct: 488 QHGLGNEAIELFEDMLKFNLKP-----DHITYVGVLSACTHV 524
>Medtr2g082550.1 | PPR containing plant-like protein, putative | HC
| chr2:34637734-34634734 | 20130731
Length = 631
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 1/102 (0%)
Query: 108 VDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRV 167
+D +S + +C +DL G H A+ G + NV+V ++L++LY++C + +A+ +
Sbjct: 160 LDPVTVSSILPACADLKDLKSGKAIHGFAVRNGMVENVFVCNALVNLYAKCLCVREAHAI 219
Query: 168 FEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHT 209
F+ MP R+VVS + ++ F + + L LF + + T
Sbjct: 220 FDLMPHRDVVSWSGVLTYFTNK-EYEKGLSLFSQMCRDGVET 260
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+++C + +++ G H LAI G +V+V ++++ LY++ + +AYR F +M +NV
Sbjct: 244 LTACCALKEMQIGKGVHGLAIKCG-ATDVFVETAIVDLYAKFGCMSEAYRQFSQMQVQNV 302
Query: 177 VSRTVIIAGFAQEWRVDMCLELF-------HPHLKYSIHTLLS 212
VS T II+GF Q+ L+LF H Y++ ++LS
Sbjct: 303 VSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLS 345
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 91 TLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSS 150
LR EM + QE+ D L +++C R L G + H G N VG +
Sbjct: 521 ALRLFKEM---LYQEVVPDHITLISILTACADLRLLRTGREIHGSTFRLGLGTNTVVGGA 577
Query: 151 LISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLK 204
L+++YS+C L A +VF+ +P ++ + + +++G+AQ ++ LFH L+
Sbjct: 578 LVNMYSKCGSLSLARKVFDILPHKDAFACSSLVSGYAQNGLIEESFLLFHDMLR 631
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 131 QYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEW 190
Q H + G + N VG SL ++YS+C L ++Y VF++ ++ VS +I+GF +
Sbjct: 457 QVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHG 516
Query: 191 RVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
D L LF L + + H + +L+ C +
Sbjct: 517 YPDQALRLFKEMLYQEV-----VPDHITLISILTACADL 550
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C S L G Q H + G +NV+V ++++ +Y++C + ++ ++FEE+P+RN
Sbjct: 345 LQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRND 404
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
V+ II G+ Q + + LF L++ +
Sbjct: 405 VTWNTIIVGYVQLGDGERAMNLFTHMLEHDM 435
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+S A+ SC G H A+ + +++VG +L+ LY++ + DA R+FEEMP
Sbjct: 240 ISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMP 299
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ +++ +++IA +AQ R L+LF + S+ + ++F F +L C
Sbjct: 300 KTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSV-----VPNNFTFASVLQACA 349
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G+Q H L I T + + V +SLI +Y++C + DA F++M +R+ VS +I G++
Sbjct: 458 GLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSM 517
Query: 189 EWRVDMCLELF 199
L LF
Sbjct: 518 HGMSMEALNLF 528
>Medtr3g088835.1 | PPR containing plant-like protein | HC |
chr3:40655233-40657665 | 20130731
Length = 629
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 114 SHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPE 173
S +S C + RDL G Q GF+ N V S+ I L+S+C L DA R+FEE +
Sbjct: 250 STLMSVCSNLRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDAVRLFEEQEQ 309
Query: 174 RNVVSRTVIIAGFAQEWRVDMCLELFHPHL-------KYSIHTLLSIISHF 217
+ +I+ +A+ + L+LF P L KY++ LLS +S F
Sbjct: 310 WDSALCNSMISCYARHDLGEDALQLFMPTLRKNIRPTKYTVSCLLSSVSIF 360
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+S + +C +DL G + H A+ G + N++V S+L+SLY++C + +A VF+ MP
Sbjct: 182 VSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMP 241
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
R+VVS ++ + + + LF
Sbjct: 242 HRDVVSWNGVLTAYFKNKEYEKGFSLF 268
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 86 GSNLATLRTTTEMSSV--IEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIA 143
G + TL +M +V + E D +S A+ SC R L G H
Sbjct: 81 GEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDN 140
Query: 144 NVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+++VGS+LI LY++C + DA VF E P+ +VV T I++G+ Q ++ L F
Sbjct: 141 DMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFF 196
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 126 LYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAG 185
L V +H I GF N ++G+SLI +Y++C+ + DA +VF+ M ++VV+ + IIA
Sbjct: 427 LQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAA 486
Query: 186 FAQEWRVDMCLELF-----HPHLKYSIHTLLSIIS 215
+ + + L+ F H K + T +SI+S
Sbjct: 487 YGFHGQGEEALKFFYQMANHSDTKPNNVTFISILS 521
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 86 GSNLATLRTTTEMSSV--IEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIA 143
G + TL +M +V + E D +S A+ SC R L G H
Sbjct: 81 GEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDN 140
Query: 144 NVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+++VGS+LI LY++C + DA VF E P+ +VV T I++G+ Q ++ L F
Sbjct: 141 DMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFF 196
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 126 LYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAG 185
L V +H I GF N ++G+SLI +Y++C+ + DA +VF+ M ++VV+ + IIA
Sbjct: 427 LQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAA 486
Query: 186 FAQEWRVDMCLELF-----HPHLKYSIHTLLSIIS 215
+ + + L+ F H K + T +SI+S
Sbjct: 487 YGFHGQGEEALKFFYQMANHSDTKPNNVTFISILS 521
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+S A+ SC R L G H +++VGS+LI LY++C + DA VF E P
Sbjct: 18 VSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYP 77
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ +VV T I++G+ Q ++ L F
Sbjct: 78 KPDVVLWTSIVSGYEQSGSPELALAFF 104
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 126 LYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAG 185
L V +H I GF N ++G+SLI +Y++C+ + DA +VF+ M ++VV+ + IIA
Sbjct: 335 LQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAA 394
Query: 186 FAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ + + L+ F+ +S + ++ F+ +LS C+
Sbjct: 395 YGFHGQGEEALKFFYQMANHSD----TKPNNVTFISILSACS 432
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 108 VDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRV 167
D LS V +C + G Q HC+ IT G+ + +++ ++L+ +Y++C+ + A +
Sbjct: 242 ADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYI 301
Query: 168 FEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
F EM ++VVS T II G AQ + L L+
Sbjct: 302 FCEMRRKDVVSWTSIIVGTAQHGLAEEALTLY 333
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%)
Query: 131 QYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEW 190
Q H L I G + + GS+LI +YS+C+ +GDA VFEE+ ++++V T + +G+ Q+
Sbjct: 465 QIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQS 524
Query: 191 RVDMCLELF 199
+ L+L+
Sbjct: 525 ENEESLKLY 533
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ V +C L +Q H L + G++ +VYV +SLI Y++ A + DA +F+ +
Sbjct: 144 LASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQ 203
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF----HPHL---KYSIHTLLSIISHFPFL 220
+ + T IIAG++++ R + L+LF H+ KY + ++LS FL
Sbjct: 204 VKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFL 258
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
++SCGS L G Q H AI + +V + LI +Y++C L DA +VF M ++
Sbjct: 350 LNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDL 409
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHP-HLKYSIHTLLSIIS 215
VS +I G++++ ++ L+LF L S TLL +S
Sbjct: 410 VSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVS 449
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D LS +S+C + L GG Q HC + +G + +V + + I Y +C + ++F
Sbjct: 241 DKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLF 300
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ M ++NVVS T +IAG Q L+LF
Sbjct: 301 DRMVDKNVVSWTTVIAGCMQNSFHRDALDLF 331
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C + G H G +++VG++L+ +Y +C +GDA +VF+E+ +RNV
Sbjct: 122 IKACSGTCKVLVGKSVHGSVFRCGLDQDLFVGTTLVDMYGKCGEIGDARKVFDELSDRNV 181
Query: 177 VSRTVIIAGF 186
VS T ++ G+
Sbjct: 182 VSWTAMVVGY 191
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 120 CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSR 179
C DL G Q H + + GF+ NVYVG++LI +Y +C L +A +V E M +++ VS
Sbjct: 144 CCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSW 203
Query: 180 TVII 183
II
Sbjct: 204 NSII 207
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/118 (20%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D+ + +++C ++ G Q H +I G+ ++ ++G++L+ +Y++C + Y+V+
Sbjct: 541 DIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVY 600
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
++ N+V ++ +A + + +F L + H FL +LS C
Sbjct: 601 NKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRP-----DHVTFLSVLSSC 653
>Medtr5g012660.1 | PPR containing plant-like protein | HC |
chr5:3861054-3862731 | 20130731
Length = 519
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%)
Query: 104 QELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGD 163
+ L +D S ++ S L G+ HC I G +++ VGSSLI +YS+C + D
Sbjct: 264 KNLQIDEFTFSIILNGIASLSALTWGMLIHCCTIKYGLDSSIVVGSSLIDMYSKCGQVND 323
Query: 164 AYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFH 200
A +F + RN+VS +I G+A+ + LF
Sbjct: 324 AESIFNVLSNRNLVSWNAMIYGYARNGDSAQAISLFE 360
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 129 GVQYHCLAITTGFI-ANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFA 187
G Q H AI +G+ AN+YV ++LI Y + L A+ +F E+P+ NVVS +I+G+
Sbjct: 24 GQQIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYV 83
Query: 188 QEWRVDMCLELF 199
+ L LF
Sbjct: 84 HAGQFKKALSLF 95
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 100 SVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVY-VGSSLISLYSRC 158
++EQ D L + C D+ G H A G + V VG+SL+ Y +C
Sbjct: 230 EMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKC 289
Query: 159 ALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
L A++VF EM ++NVVS +I+G + ++ +ELF
Sbjct: 290 GNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELF 330
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H AI T +NV+VGS+L+ LY + + + +A + FE+ NVVS T +I G+ +
Sbjct: 179 GKQIHGCAIKTSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSYTTLIGGYLK 238
Query: 189 EWRVDMCLELFH 200
R + L +F+
Sbjct: 239 SGRFEDALRVFN 250
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+S+ + L G +H AI N +VG+SLIS Y++C + D+ +F+++ +RN
Sbjct: 298 AISAASNIASLGFGRSFHACAIKFLGKLNDFVGNSLISFYAKCGSMKDSLLIFDKICKRN 357
Query: 176 VVSRTVIIAGFAQEWRVDMCLELF 199
VVS +I G+A R + LF
Sbjct: 358 VVSWNAVICGYAHNGRGAEAISLF 381
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G + H G+ + S+L+ +YS+C A RVF +MP ++VS T +I G+AQ
Sbjct: 316 GKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQ 375
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ DM L+ F L+ F+ +LS CT
Sbjct: 376 NGQPDMALQFFESLLRSGTKP-----DEITFVGVLSACT 409
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+++C R L G + H + FI + + + LI +Y++C L DA +F+E+P++++
Sbjct: 70 IAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDL 129
Query: 177 VSRTVIIAGFAQEWRVDMCLELFH--PH 202
S +I+G+A R++ +LF PH
Sbjct: 130 CSWNTMISGYANVGRIEQARKLFDEMPH 157
>Medtr2g094420.1 | PPR containing plant-like protein | HC |
chr2:40258178-40258792 | 20130731
Length = 204
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S + +C + G+ H L TGF +V+V ++++ YS+C L DA+++F++M
Sbjct: 33 FSFVLKACARLNLFHLGMMMHSLVFKTGFDCDVFVKTNVVCFYSKCGFLKDAWKMFDDMV 92
Query: 173 ERNVVSRTVIIAG 185
+N+VS T +I G
Sbjct: 93 VKNIVSWTGMICG 105
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 54/93 (58%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 160
+++ EL D + + + +CG+ D G H + G + ++YVG+SL+++Y
Sbjct: 98 MLQSELKPDNYTIPYVLKACGTFHDCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGD 157
Query: 161 LGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVD 193
+ A VF+E+P NVVS +V+I+G+A+ VD
Sbjct: 158 VVAARYVFDEIPSLNVVSWSVMISGYAKVGDVD 190
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%)
Query: 131 QYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEW 190
Q HC A+ GF ++V V ++L++ Y RC + A +VF+EM ER++V+ +I G++Q
Sbjct: 176 QIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSG 235
Query: 191 RVDMCLELF 199
+ C L+
Sbjct: 236 FYEECKRLY 244
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+ + +CG +DL G++ H G +V++ +++I++Y++C L A +F+EM
Sbjct: 262 IGSVMQACGQSKDLSFGMEVHRFMKDDGIETDVFLCNAIIAMYAKCGSLNYARELFDEMG 321
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
E++ VS II+G+ VD L++
Sbjct: 322 EKDEVSYRSIISGYMINGFVDEALDVL 348
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 132 YHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPE----RNVVSRTVIIAGFA 187
Y C + GF + + +SLI Y + LGDAY+VFE MP+ RN VS T +I GF
Sbjct: 212 YFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFC 271
Query: 188 QEWRVDMCLELF 199
+ ++D LELF
Sbjct: 272 EVGKIDEALELF 283
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 107 GVDVC--FLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDA 164
G++ C + A+++C L G Q H I G + + G++LI++YSRC ++ A
Sbjct: 418 GLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESA 477
Query: 165 YRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLS 224
VF MP + VS +IA AQ +ELF +K I + FL +L+
Sbjct: 478 ESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDI-----LPDRITFLTILT 532
Query: 225 HC 226
C
Sbjct: 533 AC 534
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C GVQ H + + G + +++V +SLI Y+ C + +VF+EM ERNV
Sbjct: 139 LSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNV 198
Query: 177 VSRTVIIAGFA 187
VS T +I G++
Sbjct: 199 VSWTSLINGYS 209
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C DL G Q H + G N +V S LI +Y++C L +A VFE ERNV
Sbjct: 285 LSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNV 344
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+IAGFA + + LE + +I + F+ +LS C
Sbjct: 345 FCWNAMIAGFAVNGQCNEVLEYLDRMQESNIR-----LDAVTFITVLSACA 390
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 38/54 (70%)
Query: 133 HCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGF 186
H +I G +V++G+++++ Y++C ++ DA +VF+ MPERNVV+ +I G+
Sbjct: 74 HAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGY 127
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 160
+++ G D L + C DL G H I G +N+ + ++++ +YS+C
Sbjct: 331 LVQSGDGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVDMYSKCGA 390
Query: 161 LGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+ A VF M +RNV++ T ++ G +Q + L+LF
Sbjct: 391 IKQASDVFRTMEKRNVITWTAMLVGLSQNGYAEGALKLF 429
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 135 LAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDM 194
+A+ GF + +VGSS+I+ +C L DA VF+ MPER+VV II G+ QE +
Sbjct: 163 MAVRKGFHLHPHVGSSMINFLVKCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGLLKE 222
Query: 195 CLELF 199
++LF
Sbjct: 223 VIQLF 227
>Medtr4g006900.1 | PPR containing plant-like protein | HC |
chr4:850780-853131 | 20130731
Length = 688
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
DV ++ + C R L G Q H A+ F+ NV + SSL+ +YS+C ++ + R+F
Sbjct: 421 DVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNVSLSSSLVVMYSKCGVVEYSTRLF 480
Query: 169 EEMPERNVVSRTVIIAGFAQ 188
+M +RNV+S T +I + +
Sbjct: 481 GDMEQRNVISWTAMIDSYIE 500
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 104 QELGVD--VCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALL 161
+ELGV+ V S + S + Y G++ H L I G + + + + LI LY +C +
Sbjct: 209 RELGVELNVYSFSSVIKSFAAAPAFYQGLKTHALLIKNGLVDSDILRTCLIDLYFKCGKV 268
Query: 162 GDAYRVFEEMP--ERNVVSRTVIIAGFA 187
A RVFEE+P ER+VV +++GF+
Sbjct: 269 KLARRVFEEIPERERDVVVWGTMLSGFS 296
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 118 SSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVV 177
S+C L G + H + G N++V +SL+ Y++C + +A +VF EM ERNVV
Sbjct: 249 SACAELGALELGRRVHVYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSERNVV 308
Query: 178 SRTVIIAGFAQEWRVDMCLELF 199
S T ++ G A + L LF
Sbjct: 309 SWTSLVVGLAVNGFGEEALGLF 330
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 112 FLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEM 171
FL A+S + RD G H + + GF + ++V +SL+ +Y+ C AY+VFE M
Sbjct: 145 FLLKAISKSLNVRD---GEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELM 201
Query: 172 PERNVVSRTVIIAGFAQEWRVDMCLELF 199
ER++V+ +I GFA + + L LF
Sbjct: 202 GERDLVAWNSVINGFALNGKPNEALSLF 229
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +CG D++ + H L G +V+VGS+L++ Y + L+ DA+ VFEE+P R+V
Sbjct: 140 IRACGDAGDVFEVKKIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDV 199
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHL-------KYSIHTLLSIIS 215
V ++ G+AQ + L +F + +Y++ +LSI S
Sbjct: 200 VLWNSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLSIYS 245
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 108 VDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRV 167
VD +S + G L G Q H L I F N +VG+ L+++YS+C L D+ V
Sbjct: 350 VDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLV 409
Query: 168 FEEMPERNVVSRTVIIAGFAQ 188
F +M ++N VS +IA FA+
Sbjct: 410 FYQMTQKNSVSWNSVIAAFAR 430
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 133 HCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRV 192
H L GF + VG++LI+ Y +C +VF+EM ERNVV+ T +I+G AQ
Sbjct: 172 HGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFY 231
Query: 193 DMCLELF 199
+ L LF
Sbjct: 232 EDSLRLF 238
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
+C + L G + H L G +++ + S+L+ LYS+C L A+++FE E + VS
Sbjct: 260 ACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVS 319
Query: 179 RTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIIS 215
TVI+ FAQ + +++F + + +++S
Sbjct: 320 LTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVS 356
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 143 ANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPH 202
A++YVG++LI +Y +C + VFEEM +R+ VS T +IAG A D L LF
Sbjct: 342 ADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLM 401
Query: 203 LKYSIHTLLSIISHFPFLVLLSHCT 227
L+ + +H F+ +L C
Sbjct: 402 LREGVRP-----THGTFVGVLLACA 421
>Medtr2g028240.1 | PPR containing plant-like protein | HC |
chr2:10416867-10418417 | 20130731
Length = 516
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ + C + DL G Q HC+A+ GF + + L+ +Y++C + A+ VF+ +
Sbjct: 258 LTSVLVCCSEESDLLTGKQVHCVAVRQGFTFETQLCNVLLDMYAKCGKILQAWSVFDGIF 317
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
+++V+S T +I G+ + +ELF ++ L + ++ FL +LS C
Sbjct: 318 QKDVISWTCMIDGYGRNGCGYEAVELFWKMMEDGSEVLPNSVT---FLSVLSAC 368
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%)
Query: 124 RDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVII 183
+ L G++ H +A+ + NV VG+SLI +Y +C L A +F+ M ER+V S II
Sbjct: 368 KSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSII 427
Query: 184 AGFAQEWRVDMCLELF 199
G+ Q ELF
Sbjct: 428 GGYFQAGFCGKAHELF 443
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D L + +CG RDL G H + I G + ++ +S++++Y++C + A ++F
Sbjct: 182 DEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIF 241
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH 208
+ M ER+ V+ +I+GF Q + + F K +
Sbjct: 242 DCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVE 281
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 6/164 (3%)
Query: 46 NAPRILNLVSPKKSAYDIKNRRSHLRLIEDMLENSASNPVGSNLATLRTTTEMSSVIEQE 105
N P + +S K+ + N + I +++ S N + N + T + S+ EQ
Sbjct: 20 NKPTKFDCISSKRVNANSNNVSTTKPSIRKLID-SQLNQLCINGSLSEAVTILDSLAEQG 78
Query: 106 LGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANV--YVGSSLISLYSRCALLGD 163
V + + SC K ++ G + H G + NV +V + L+S+Y++C LLG
Sbjct: 79 CRVKPITYMNLLQSCIDKDCIFIGKELHS---RIGLVENVNPFVETKLVSMYAKCGLLGM 135
Query: 164 AYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
A +VF EM RN+ + + +I G ++ + LF+ ++ +
Sbjct: 136 ARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGV 179
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+++CG + G Q H + +GF+ N V ++L+ +Y++C + DA VF+ + +R+V
Sbjct: 122 LNACGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDV 181
Query: 177 VSRTVIIAGFAQEWRV 192
V+ T +I G+A+ R+
Sbjct: 182 VAWTAMICGYAKAGRM 197
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 126 LYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAG 185
L G + HC GF +V+V +SL+ LYSR +L A++VF +MP ++V S +I+G
Sbjct: 137 LVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISG 196
Query: 186 FAQ 188
F Q
Sbjct: 197 FCQ 199
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 126 LYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAG 185
L G++ H I +V+V + LI LY +C L DA +F E+P V IIA
Sbjct: 442 LQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIAS 501
Query: 186 FAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
R + L+LF L + H F+ LLS C+
Sbjct: 502 LGIHGRGEEALQLFKDMLAERVKA-----DHITFVSLLSACS 538
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 104 QELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGD 163
+ + +D ++ + C D+ GV H + G ++V+V ++LI++YS+ L D
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQD 275
Query: 164 AYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
A VF++M R++VS IIA + Q L F
Sbjct: 276 AQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFF 311
>Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:2188077-2185482 | 20130731
Length = 316
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ SC L G Q H + GF ++ ++LI++Y++C L A +VF+ M ERN
Sbjct: 116 LKSCAGLSALRLGKQVHGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDGMCERNE 175
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
V+ + +IAG+ R + E+F+ ++ + + F V+L+ C+
Sbjct: 176 VTWSTMIAGYGMHGRFEEVFEMFNRMVEVG-----ERMDNVSFTVVLTACS 221
>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:18562024-18564318 | 20130731
Length = 740
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPE--R 174
+S+C + + G HC + N +VG++ + +YS+C L A +VF++MPE R
Sbjct: 373 ISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDR 432
Query: 175 NVVSRTVIIAGFAQEWRVDMCLELF 199
+ T +I GFA + LEL+
Sbjct: 433 DSFCYTAMIGGFAVHGYGNQALELY 457
>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38635968-38632937 | 20130731
Length = 694
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 110 VCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFE 169
+ F+S +SSC L G Q H I G + V V SSL+S+YS+C L D+ + F
Sbjct: 287 ITFVS-VISSCSELATLCQGKQIHAEVIKAGASSVVTVISSLVSMYSKCGSLQDSIKAFL 345
Query: 170 EMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
E ER+VV + +IA + + + ++LF+ K ++ + FL LL C+
Sbjct: 346 ECEERDVVLWSSMIAAYGFHGQCEKAIKLFNDKEKENMAG-----NEVTFLSLLYACS 398
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 53/99 (53%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ SC + G Q H L T+G+ ++ ++ + L++ YS+ L +A ++F+ MP RN
Sbjct: 85 IQSCIPTNSVSLGKQLHSLIFTSGYSSDKFISNHLLNFYSKFGELNNAVKLFDRMPRRNY 144
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIIS 215
+S ++I + + ++ LF + ++ T ++++
Sbjct: 145 MSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVT 183
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ + SCG+ DL G H L + G + V +SL+++YS+C ++ D+ +VF +
Sbjct: 206 LASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLA 265
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI---HTLLSIISH 216
+ V+ T I G Q R ++ L +F ++ SI H LS I H
Sbjct: 266 YASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILH 312
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
LS + +C S L G Q H + + G N +V ++LI LY +C + A VF+ +
Sbjct: 307 LSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLT 366
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
E ++VS +I +AQ LELF
Sbjct: 367 ELDIVSINTMIYAYAQNGFGHEALELF 393
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTG--FIANVYVGSSLISLYSRC 158
++E+ D + + + +CG R + G H + G F VYV +SL+ +Y +C
Sbjct: 198 MMEKGFCPDNFVVPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKC 257
Query: 159 ALLGDAYRVFEEMP--ERNVVSRTVIIAGFAQ 188
+L DA +VF+EMP +RN V +I G+ Q
Sbjct: 258 GVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQ 289
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 117 VSSCGSKRDLYGGVQYHCLAI---TTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPE 173
+ +C S+ + G Q HC I ++ + NVYV ++L+ +Y++C + A +FE M
Sbjct: 284 LDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIH 343
Query: 174 -RNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
++VVS +I GFAQ R + L +F ++ +I +H FL +LS C
Sbjct: 344 VKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEP-----NHVTFLGVLSACN 393
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C DL G Q H + G N +V S LI +Y++C L +A VFE ERNV
Sbjct: 285 LSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNV 344
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+IAGFA + + LE + +I F+ +LS C
Sbjct: 345 FCWNAMIAGFAVNGQCNEVLEYLDRMEESNIRP-----DAVTFITVLSACA 390
>Medtr7g084830.1 | PPR containing plant-like protein | HC |
chr7:32742835-32744848 | 20130731
Length = 476
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 133 HCLAITTGFIANVYVGSSLISLYSRCAL-LGDAYRVFEEMPERNVVSRTVIIAGFAQEWR 191
H LAI GF ++VYV +++++LY + + D ++VF++M RNVVS T +IAG +
Sbjct: 141 HGLAIKMGFWSDVYVQNNMMNLYFKIGGDVDDGWKVFDKMRVRNVVSWTTVIAGLVACGK 200
Query: 192 VDMCLELFH 200
+D E+F
Sbjct: 201 LDTAREVFE 209
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ +S CGS L G Q H A+ G V S+LIS+YSR L +A ++F+ +
Sbjct: 457 LASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIK 516
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
++VS T +I G+A+ + LF +I ++ + + F+ +L+ C
Sbjct: 517 NNDIVSWTAMINGYAEHGYSQEAISLFE-----NISSVGLMPDYVTFIGILTACN 566
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%)
Query: 102 IEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALL 161
++ L D +S A+ +C ++Y G H ++ +G I +V+V S+L+ +Y +
Sbjct: 143 VDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKT 202
Query: 162 GDAYRVFEEMPERNVVSRTVIIAGF 186
VFE M RNVVS T +I G
Sbjct: 203 EQGCSVFENMTTRNVVSWTAVIVGL 227
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C + G Q H A+ G + + V +S+I+LYS+C LL +A VF+ M +++
Sbjct: 360 ISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDI 419
Query: 177 VSRTVIIAGFAQ 188
+S + II+ + Q
Sbjct: 420 ISWSTIISVYCQ 431
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 59/104 (56%), Gaps = 9/104 (8%)
Query: 120 CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSR 179
C D+ GVQ HC + GF + +VG +L+ LY++C + +A RVF ++ R++V
Sbjct: 177 CTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMW 236
Query: 180 TVIIAGFA------QEWRV--DMCLELFHPHLKYSIHTLLSIIS 215
V+++ + + +RV M L++ + +++ +LLS+IS
Sbjct: 237 NVMVSCYVFNSLPEEAFRVFNSMRLDVVNGD-EFTFSSLLSVIS 279
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H L + F ++V V S+LI++Y++ + DA RVF+EM RNVV+ +I GF
Sbjct: 289 GKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGN 348
Query: 189 EWRVDMCLELFHPHLK 204
+ ++L L+
Sbjct: 349 HGDGNEVMKLVKEMLR 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+S +SSCG + +Q H A+ + V +SLIS YS+C + A++ FE
Sbjct: 374 ISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTS 433
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ ++V+ T +I +A + E+F L Y I FL +LS C
Sbjct: 434 QPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKP-----DRIAFLGVLSACA 483
>Medtr7g082690.1 | PPR containing plant-like protein | HC |
chr7:31706993-31708834 | 20130731
Length = 503
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ A+++C + G Q+H L I G +V V ++L+ +Y++C + A+ VF
Sbjct: 263 LATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTN 322
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTR 228
R+VVS T +I AQ + L++F + S+ ++ F+ +L C++
Sbjct: 323 SRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEP-----NYITFICVLYACSQ 373
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+S + +C +DL G H A+ G + +V+V ++L++LY+ C + +A VF+ MP
Sbjct: 346 MSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMP 405
Query: 173 ERNVV-----SRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSII 214
RNVV S + GF Q+ +++ E+ +K + T+LSI+
Sbjct: 406 HRNVVTWNSLSSCYVNCGFPQK-GLNVFREMVLNGVKPDLVTMLSIL 451
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+S +S+C +DL G H A+ G + NV+V ++L++LY C + +A VF+ MP
Sbjct: 245 VSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMP 304
Query: 173 ERNVVSRTVIIA-----GFAQE 189
RNV++ + + GF Q+
Sbjct: 305 HRNVITWNSLASCYVNCGFPQK 326
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+S + C +DL G + H + G + +V+V S+ ++ Y++C + +A VF+ MP
Sbjct: 144 VSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMP 203
Query: 173 ERNVV-----SRTVIIAGFAQE 189
R+VV S + GF Q+
Sbjct: 204 HRDVVTWNSLSSCYVNCGFPQK 225
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
+C +DL G H A+ G + +V+V ++L+SLY++C + +A VF+ +P R V S
Sbjct: 453 ACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVAS 512
Query: 179 RTVIIAGF 186
I+ +
Sbjct: 513 WNGILTAY 520
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 97 EMSSVIEQELGVDVCFLSHAVSS----CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLI 152
E S+ Q + +C SHAVSS C D G+ H GF A VYV ++L+
Sbjct: 87 EAVSLYVQMRRIGLCPSSHAVSSILKSCARVEDDLCGLLIHGHVHKFGFDACVYVQTALL 146
Query: 153 SLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVD 193
LY + + A +VF+EMP++NVVS +++G+ + +D
Sbjct: 147 DLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLD 187
>Medtr4g086270.1 | PPR containing plant-like protein | HC |
chr4:33780755-33778471 | 20130731
Length = 565
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Query: 97 EMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYS 156
E ++E+ + D CG + + + H + + F ++ + + +I +Y
Sbjct: 207 EALELMEKGIKADANCFEILFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKMHNKVIEMYG 266
Query: 157 RCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHP----HLKYSIHTLLS 212
C + DA RVF+ MP RN+ S ++I G+A D L+LF L+ + T+L+
Sbjct: 267 NCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEGLQLFEQMNELGLEITSETMLA 326
Query: 213 IIS 215
++S
Sbjct: 327 VLS 329
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 104 QELGV--DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALL 161
Q GV D+ ++ V +C L G H I G +N+ V ++LI++Y++C +
Sbjct: 664 QSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSV 723
Query: 162 GDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+A VF ++P +++VS +I G++Q + LELF
Sbjct: 724 EEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELF 761
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q HC + GF ++V+V ++L++ Y + +AY+VF+E R+ VS +I GFA+
Sbjct: 137 GFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFAR 196
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ V C +F + + F+ LLS C+
Sbjct: 197 KGDVSGCFRVFGEMRGVCVRP-----DEYTFVALLSGCS 230
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 118 SSCGSKRDLYGGVQYHCLAITT--GFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
+ GS L G Q H + + T + +VY+ +SLIS+Y++C + DAYR+F M R+
Sbjct: 471 GAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRD 530
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+S +I G + R + L ++ L++ ++ FL +L+ C
Sbjct: 531 KISWNSMIMGLSDHGRANEALNMYETMLEFGVYP-----DAVTFLGVLTACA 577
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G+Q H + ++ + +SLIS Y++C + DAY++F ++ E NVVS +I GFAQ
Sbjct: 439 GLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVINGFAQ 498
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+ L ++ S+ + FL +LS CT
Sbjct: 499 NGFGEEALSMYKRMQNESLEP-----NRVTFLAVLSACT 532
>Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:36615461-36616774 | 20130731
Length = 316
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ SC L G Q H + GF ++ ++LI++Y++C L A +VF+ M ERN
Sbjct: 116 LKSCAGLSALRLGKQVHGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDGMCERNE 175
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
V+ + ++AG+ R + E+F+ ++ + + F V+L+ C+
Sbjct: 176 VTWSTMMAGYGMHGRFEEVFEMFNRMVEVG-----ERMDNVSFTVVLTACS 221
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 117 VSSCGSKRDLYGGVQYH--CLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPER 174
+S+CGS DLY +Q H T + + +SLI +Y +C + AY VF M +R
Sbjct: 205 MSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFATMEDR 264
Query: 175 NVVSRTVIIAGFAQEWRVDMCLELFH 200
NV S T +I G+A L FH
Sbjct: 265 NVSSWTSMIVGYAMHGHAKEALGCFH 290
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H + +GF +NVYV S+L+ +Y++C L +A + E M + +VVS ++ GF +
Sbjct: 255 GEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVR 314
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
+ L LF ++H I + F +L+ C
Sbjct: 315 HGLEEEALRLFK-----NMHGRNMKIDDYTFPSVLNCC 347
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+S+C L G Q H A+ G+ +VG++L+++Y +C + +A FE + E++
Sbjct: 400 ALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKD 459
Query: 176 VVSRTVIIAGFAQ 188
VVS ++AG+A+
Sbjct: 460 VVSWNTMLAGYAR 472
>Medtr3g088820.1 | PPR containing plant-like protein | HC |
chr3:40646143-40648516 | 20130731
Length = 698
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S+A+ +C S L G+Q H + G + V SSLI++Y +C L + +RVF ++
Sbjct: 268 FSNALVACSSMHALEEGMQIHGGVVKWGLHEDTVVSSSLINMYVKCGELENGFRVFHQLG 327
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
+++V T I++G+A + +LF
Sbjct: 328 SKDLVCWTCIVSGYAMSGKTWDARKLF 354
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ SC +L Q H L + GF +NV +GS+L+ +Y++C ++ A R+F E+P N
Sbjct: 171 LGSCADVYELSLSQQVHGLVVKFGFSSNVIIGSALVDVYAKCGIMVYARRMFHEIPRPNA 230
Query: 177 VSRTVII 183
V+ VI+
Sbjct: 231 VTWNVIV 237
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 104 QELGV--DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALL 161
Q GV D+ ++ V +C L G H I G +N+ V ++LI++Y++C +
Sbjct: 389 QSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSV 448
Query: 162 GDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+A VF ++P +++VS +I G++Q + LELF
Sbjct: 449 EEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELF 486
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 120 CGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSR 179
CG RDL G+Q H + G +V+VGS L+ ++ +C + A +VF+ + RNVV
Sbjct: 237 CGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVW 296
Query: 180 TVIIAGFAQEWRVDMCLELF 199
T ++ + Q + L L
Sbjct: 297 TSLMTAYLQNGEFEETLNLL 316
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 144 NVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHL 203
+VY +S+++ Y++C L A R F++ P +N V + +IAG++Q + L+LFH +
Sbjct: 260 DVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMM 319
Query: 204 KYSI----HTLLSIIS 215
+ + HTL+S++S
Sbjct: 320 ERGVVPIEHTLVSVLS 335
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+ +C ++ G +C+ GF + V + LI Y+ LL +A +VF+E +++
Sbjct: 100 ALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKD 159
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFH----PHLKYSIHTLLSIIS 215
VV+ T +I G+A + +E+F H++ + TL++++S
Sbjct: 160 VVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVS 203
>Medtr5g044260.1 | PPR containing plant-like protein | HC |
chr5:19452918-19451090 | 20130731
Length = 565
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 103 EQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLG 162
E EL D + +C L+ G Q H + GF + Y+ +SLI Y+ C L
Sbjct: 78 ENELFPDKHTYPFVLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLE 137
Query: 163 DAYRVFEEMPE-RNVVSRTVIIAGFAQEWRVDMCLELFHPHLKY---SIHTLLSII 214
A +VF+ M E RNVVS V+I +A+ D+ L +F +K +T+ S+I
Sbjct: 138 TARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKVYEPDCYTMQSVI 193
>Medtr3g037470.1 | TPR superfamily protein | HC |
chr3:13772234-13768538 | 20130731
Length = 424
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 115 HAVSSCGSKRDLYG-GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPE 173
+ + +C +K Y G Q H L I G+ + + + +SL+ +Y+ L DA++VF+E+PE
Sbjct: 80 YTLKACINKNHSYVLGKQLHSLIIKFGYESIIQLQTSLLKVYAGGGNLFDAHQVFDEIPE 139
Query: 174 RNVVSRTVIIAGFAQEWRVDMCLELF 199
+N++ T +I+ + + + + LELF
Sbjct: 140 KNIICWTSLISAYVENHKSNKGLELF 165
>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:21642144-21644166 | 20130731
Length = 625
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G + HC+ + G +V + S+L+ LY++C ++ A +F M RN+++ +++GFAQ
Sbjct: 374 GKEVHCMYVRKGGSKDVIIESALVDLYAKCGMVDFACTMFASMEVRNLITWNSMVSGFAQ 433
Query: 189 EWRVDMCLELFHPHLKYSI 207
R L LF +K I
Sbjct: 434 NGRGVEALALFEDMIKEGI 452
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
SCG ++ G H I GF + ++ ++L+S+Y++C L + +F+EM E++VVS
Sbjct: 166 SCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVS 225
Query: 179 RTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSIISHFPF 219
+I + Q D + F LK H T+++++S F
Sbjct: 226 WNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANAF 270
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 144 NVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHL 203
+VY +S+++ Y++C L A R F++ P +N V + +IAG++Q + L+LFH +
Sbjct: 310 DVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMM 369
Query: 204 KYSI----HTLLSIIS 215
+ + HTL+S++S
Sbjct: 370 ERGVVPIEHTLVSVLS 385
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+ +C ++ G +C+ GF + V + LI Y+ LL +A +VF+E +++
Sbjct: 150 ALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKD 209
Query: 176 VVSRTVIIAGFAQEWRVDMCLELFH----PHLKYSIHTLLSIIS 215
VV+ T +I G+A + +E+F H++ + TL++++S
Sbjct: 210 VVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVS 253
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
+S +++ S L G+Q H + ++ + +SLIS Y++C + DAY++F ++
Sbjct: 289 ISSVLAASASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVV 348
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
E NVVS +I GF Q + L ++ S+ + FL +LS CT
Sbjct: 349 ELNVVSNNSVINGFTQNGFGEEALNMYKRMQNESLEP-----NRVTFLAVLSACT 398
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%)
Query: 100 SVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCA 159
+++E + + L+ + C L G Q H L + + +SLIS+YS+C
Sbjct: 252 TMLETGVKPNALSLTSVLLGCSDLSALQTGKQVHQLVCKSPLSRDTTAVTSLISMYSKCG 311
Query: 160 LLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
L D++ +F ++P ++VV+ +I+G+AQ + L LF K I
Sbjct: 312 DLKDSWDLFVQIPRKDVVTWNAMISGYAQHGAGEKALHLFDEMKKSEI 359
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C D G H + +GF ANVYV + L+++Y C + +VF+++P+ NV
Sbjct: 114 LKACSFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNV 173
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHT 209
V+ T +I G+ + LE+F ++ +
Sbjct: 174 VAWTCLINGYVINDQPREALEVFKEMGRWGVEA 206
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S + +C L G+Q H I +G +V +SL+ +Y++C + A+ VFE +
Sbjct: 272 FSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIR 331
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
++N+VS II G+A LE F
Sbjct: 332 DKNLVSWNAIIGGYASHGLATRALEEF 358
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITT-GFIANVYVGSSLISLYSRCALLGDAYRVFEEM 171
L +S+C D+ G HC A+ G V VG+SL+ +Y++C + A VF M
Sbjct: 259 LCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSM 318
Query: 172 PERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
+RNVV+ ++ G A + +++F P + + F+ LLS C+
Sbjct: 319 LKRNVVAWNAMLGGLAMHGMGKIAVDMF-PSMVEEVKP-----DGVTFMALLSACS 368
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C + G H G ++++G++LI +Y +C + DA +VF E+ ERNV
Sbjct: 122 IKACSGTCKVLVGKSVHGSVFRCGLDQDLFMGTTLIDMYGKCGQISDARKVFNELTERNV 181
Query: 177 VSRTVIIAGF 186
VS T ++ G+
Sbjct: 182 VSWTAMVVGY 191
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 125 DLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP-ERNVVSRTVII 183
DLY G Q H +T + ++ + +SLI++YSRC +GDA VF EM ++V++ +I
Sbjct: 420 DLYLGKQIHQF-VTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMI 478
Query: 184 AGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
G+A LELF I ++ F+ +L+ C
Sbjct: 479 GGYAFHGFAAQALELFERMKGLKIQP-----TYITFISVLNACA 517
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 125 DLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP-ERNVVSRTVII 183
DLY G Q H +T + ++ + +SLI++YSRC +GDA VF EM ++V++ +I
Sbjct: 420 DLYLGKQIHQF-VTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMI 478
Query: 184 AGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
G+A LELF I ++ F+ +L+ C
Sbjct: 479 GGYAFHGFAAQALELFERMKGLKIQP-----TYITFISVLNACA 517
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 125 DLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP-ERNVVSRTVII 183
DLY G Q H +T + ++ + +SLI++YSRC +GDA VF EM ++V++ +I
Sbjct: 420 DLYLGKQIHQF-VTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMI 478
Query: 184 AGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
G+A LELF I ++ F+ +L+ C
Sbjct: 479 GGYAFHGFAAQALELFERMKGLKIQP-----TYITFISVLNACA 517
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 125 DLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP-ERNVVSRTVII 183
DLY G Q H +T + ++ + +SLI++YSRC +GDA VF EM ++V++ +I
Sbjct: 420 DLYLGKQIHQF-VTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMI 478
Query: 184 AGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
G+A LELF I ++ F+ +L+ C
Sbjct: 479 GGYAFHGFAAQALELFERMKGLKIQP-----TYITFISVLNACA 517
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 125 DLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP--ERNVVSRTVI 182
DL + HC + GF+ + V S L+ +YS+C LG A+++F+ +P +++++ T I
Sbjct: 432 DLKQAMNMHCYLVKLGFLCKLEVASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAI 491
Query: 183 IAGFAQEWRVDMCLELFHPHLK 204
I + + +M + LF+ ++
Sbjct: 492 IDAYGKHGYGEMAVSLFNQMVQ 513
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 50/88 (56%)
Query: 99 SSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRC 158
S ++++ +GVD + + +CG +++ G + L + G+ NV V ++L+ +Y +C
Sbjct: 204 SRMVDEGVGVDCATVVSVLQACGVLKNVELGREVRALTLEKGYWGNVVVRNALLDMYVKC 263
Query: 159 ALLGDAYRVFEEMPERNVVSRTVIIAGF 186
+ +A + M E++VV+ T +I G+
Sbjct: 264 GEMEEARLLLNGMEEKDVVTWTTLINGY 291
>Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1721493-1719058 | 20130731
Length = 774
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITT--GFIANVYVGSSLISLYSRCALLGDAYR 166
D FL HA C K+ + G+ H + ++++ ++L+++Y +C L A
Sbjct: 80 DYAFLFHA---CAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARY 136
Query: 167 VFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+F++MP RN VS TV+++G+AQ + C LF
Sbjct: 137 LFDQMPRRNFVSWTVLVSGYAQFGLIRECFALF 169
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 19/117 (16%)
Query: 123 KRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCA---------LLGDAYRVFEEMPE 173
++D+ G+Q H A+ +VYV ++LI++YS+C+ DA+ VF+ M
Sbjct: 192 EQDVKYGLQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEY 251
Query: 174 RNVVSRTVIIAGFAQEWRVDMCLELF-HPH---LKYSIHTLLSIISHFPFLVLLSHC 226
RN++S +I+GF D + LF H + ++++ TLL ++S L+HC
Sbjct: 252 RNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSS------LNHC 302
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 125 DLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP-ERNVVSRTVII 183
DLY G Q H +T + ++ + +SLI++YSRC +GDA VF EM ++V++ +I
Sbjct: 346 DLYLGKQIHQF-VTKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMI 404
Query: 184 AGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
G+A LELF I ++ F+ +L+ C
Sbjct: 405 GGYAFHGFAAQALELFERMKGLKIQP-----TYITFISVLNACA 443
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 131 QYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEW 190
Q H IT+G+ + VGS LI +Y++ + +A R+FE +P+++VV+ + +I G A+
Sbjct: 363 QVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFG 422
Query: 191 RVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
+ LF + + I HF ++L C+ +
Sbjct: 423 SDKLAFSLFMDMIHLGLQ-----IDHFVISIVLKACSSL 456
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%)
Query: 100 SVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCA 159
+I L +D +S + +C S G Q H L + G+ + V ++LI +Y++C
Sbjct: 433 DMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCG 492
Query: 160 LLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLK 204
+ DA +F + E + +S T II G AQ R + + L H ++
Sbjct: 493 DIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIE 537
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 112 FLSHAV-SSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEE 170
FL AV +CG R++ G H ++ + ++L+ +Y +C L DA RVF E
Sbjct: 106 FLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCE 165
Query: 171 MPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIIS 215
+P +N S +I G+A++ +D ++LF + I + SII+
Sbjct: 166 IPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIA 210
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 40/61 (65%)
Query: 124 RDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVII 183
R + H I +GF ++++ +++IS+YS+C+ + DA +F+EMP RN+VS T ++
Sbjct: 17 RSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMV 76
Query: 184 A 184
+
Sbjct: 77 S 77
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +CG +L G + HC I +GF ++ Y S+LI +YS C LL +A ++F++ +
Sbjct: 243 LKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSS 302
Query: 177 VSRTV 181
VS ++
Sbjct: 303 VSESL 307
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 124 RDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVII 183
+ L G Q HC A+ G N+YV +LI++Y+ C + + RVF+++ E VV+ II
Sbjct: 126 KALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAII 185
Query: 184 AGFAQEWRVDMCLELF 199
A+ R + L LF
Sbjct: 186 MSLARNNRANEALALF 201
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 59 SAYDIKNRRSHLRLIEDMLENSASNPVGSNLATLRTTTEMSSVIEQELGVD-VCFLSHAV 117
SAY I N+ H ++ + G ++ L EM + L ++ V FLS A+
Sbjct: 458 SAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEM---FKNRLEINKVTFLS-AI 513
Query: 118 SSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVV 177
+C + L G H I TG ++Y+ ++L+ +Y++C L A +VF+ + E++VV
Sbjct: 514 QACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVV 573
Query: 178 SRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
S + +IA +++ LFH + +I + F+ +LS C
Sbjct: 574 SWSTMIAAHGIHGQINAATSLFHKMVLSNIKP-----NEVTFMNILSAC 617
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
C + L G + H A+ +V VGS+L+ +Y++C L + VFE+M RNV++
Sbjct: 518 GCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVIT 577
Query: 179 RTVIIAGFAQEWRVDMCLELF 199
V+I + + + L+LF
Sbjct: 578 WNVLIMAYGMHGKGEEALKLF 598
>Medtr5g018370.1 | PPR containing plant-like protein | HC |
chr5:6845861-6848150 | 20130731
Length = 714
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Query: 83 NPVGSNLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFI 142
+ + + +R +EM + + +D LS +S C L G HC A G+
Sbjct: 394 SKMADGMGAIRCFSEMHHEVHE---IDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYD 450
Query: 143 ANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPH 202
+ V SLI +Y++ L AY VF ++ ++ ++ GF+ VD L+LF
Sbjct: 451 VEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEI 510
Query: 203 LKYSIHTLLSIISHFPFLVLLSHCT 227
+K + + FL LLS C+
Sbjct: 511 IKQGL-----VPDQVTFLSLLSACS 530
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 111 CF-LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFE 169
CF + +++C + LY G Q H I G N+ + ++LI +Y++C + D++++F
Sbjct: 310 CFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFS 369
Query: 170 EMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
M N+VS T ++ G+ ++LF+ + I F+ +LS C+
Sbjct: 370 GMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKP-----DKIVFMAVLSACS 422
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S AVS+C S G Q H I GF +N+ V ++++ +Y RC +A ++F EM
Sbjct: 213 FSIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMT 272
Query: 173 ERNVVSRTVIIAGF 186
+++ ++ +IAGF
Sbjct: 273 QKDTITWNTLIAGF 286
>Medtr3g117620.1 | PPR containing plant-like protein | HC |
chr3:55081139-55078984 | 20130731
Length = 493
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 108 VDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRV 167
+D L +++ +D+ G Q H +G+ ++V+VGS+LI YS+ + DA V
Sbjct: 101 LDTYALCSTLTASSKFKDVNFGKQIHAHVEKSGWSSSVFVGSALIDFYSKLLNVKDAALV 160
Query: 168 FEEMPERNVVSRTVIIAGFAQ 188
F+E+P+RN V +++G+ +
Sbjct: 161 FDEIPDRNTVCANALLSGYCE 181
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
DV + +CG DL G + H + GF ++V V ++LI++Y++C + A VF
Sbjct: 199 DVYTFPCVLRTCGGVPDLVKGREIHVHVLRFGFESDVDVINALITMYAKCGDIDTARLVF 258
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIH----TLLSIIS 215
++MP+++ +S +IAG + L LF ++Y + T+ S+I+
Sbjct: 259 DKMPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVIT 309
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 97 EMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYS 156
E +I E+ + V +S+C DL G+ H A TG I V V + LI +Y+
Sbjct: 394 EAEGIIPDEITIGV-----VLSACSCLCDLDTGMNLHEKAKKTGLIFYVIVANKLIDMYA 448
Query: 157 RCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISH 216
+C + A VF + ++N++S T II G R L F ++ ++++
Sbjct: 449 KCKCIDKALEVFHSIRDKNIISWTSIILGLRINNRCYDALFFFKEMMRRQKPNWVTLV-- 506
Query: 217 FPFLVLLSHCTRI 229
+LS C RI
Sbjct: 507 ----CVLSACARI 515
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 129 GVQYHCLAITTG-FIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFA 187
G + H + TG + + V +L+ +Y +C DA +VF+EMP R+VV+ TV++AGF
Sbjct: 226 GKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFV 285
Query: 188 QEWRVDMCLELFHPHL-------KYSIHTLLSIISH 216
Q + L F L ++++ ++LS +H
Sbjct: 286 QCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAH 321
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 129 GVQYHCLAITTG-FIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFA 187
G + H + TG + + V +L+ +Y +C DA +VF+EMP R+VV+ TV++AGF
Sbjct: 226 GKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFV 285
Query: 188 QEWRVDMCLELFHPHL-------KYSIHTLLSIISH 216
Q + L F L ++++ ++LS +H
Sbjct: 286 QCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAH 321
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
AV++C + + L + H +I G+ +NV+VGS+L+ LY + + + A +VF+ MPER+
Sbjct: 117 AVAACSNDKHL---MLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERD 173
Query: 176 VVSRTVIIAGFAQEWRVDMCLELF 199
V +I G + D ++LF
Sbjct: 174 TVLWNTMINGLVKNCCFDDSIQLF 197
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 88 NLATLRTTTEMSSVIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYV 147
N +T + +++ E + ++ +S+C L G H L + N+YV
Sbjct: 389 NGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYV 448
Query: 148 GSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHP--HLKY 205
++L+ +Y++C + +A+++F+ M E+N V+ +I G+ L+L++ HL Y
Sbjct: 449 STALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGY 508
Query: 206 --SIHTLLSII 214
S T LS++
Sbjct: 509 NPSAVTFLSVL 519
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D+ S + + RD+ + HC I A+ +V +SL+ YS+C L DA +VF
Sbjct: 134 DLVVFSILLKTASQLRDIVLTTKLHC-NILKSNAADSFVLTSLVDAYSKCGKLRDARKVF 192
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELFH 200
+E+P+R+VVS T +I + Q + L LF+
Sbjct: 193 DEIPDRSVVSWTSMIVAYVQNECAEEGLMLFN 224
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ +S+C ++ G H L + G + + + +SL+ +Y++C L+ DA+ VF
Sbjct: 345 LASLLSACAQLENIVMGKLLHVLVVKYG-LDDTSLRNSLVDMYAKCGLIPDAHYVFATTV 403
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFH 200
+++VVS +I+G+AQ L+LF+
Sbjct: 404 DKDVVSWNSVISGYAQSGSAYEALDLFN 431
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C L G Q HC +I +G I +V V + LI +Y++C L A VF+ ++
Sbjct: 478 LGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDI 537
Query: 177 VSRTVIIAGFAQ 188
VS + +I G+AQ
Sbjct: 538 VSWSSLIVGYAQ 549
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L + +S+C ++ H L + + V V ++L+ Y C+ + +A R+F+EMP
Sbjct: 188 LVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMP 247
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
ERN+V+ V++ G+A+ VD ELF
Sbjct: 248 ERNLVTWNVMLNGYAKTGLVDEARELF 274
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H + + F ++YVG+SL+ +Y + +G A +VF+EM R++VS T +I G+A+
Sbjct: 142 GFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYAR 201
>Medtr5g038580.1 | PPR containing plant-like protein | HC |
chr5:16954387-16952525 | 20130731
Length = 620
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L VS+C + ++ G Q H L++ +V V +SL+ +YS+C G A+ VF
Sbjct: 241 LVSVVSACATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSE 300
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI----HTLLSIISHF 217
+RN+++ +IAG + +ELF + I T S+IS F
Sbjct: 301 KRNLITWNSMIAGMMMNSESERAVELFERMVDEGILPDSATWNSLISGF 349
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 131 QYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
Q HCLA G +VYV +SL++ YS+C +L + +VFE + +NVV+ ++G Q
Sbjct: 157 QVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMSGLLQ 214
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 104 QELGVDVCFLSHAVSSCGS-KRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLG 162
+ L D ++ + CG L G+ H A+ +GF +++YV +++I +Y +C
Sbjct: 231 EGLKADSVIVASVLPVCGRLMEGLKLGMAMHGCALRSGFDSDLYVSNAIIDMYCKCGYPD 290
Query: 163 DAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+A VF M R++VS + +IAG++Q EL+
Sbjct: 291 EACLVFSYMVFRDIVSWSTLIAGYSQNGMYKESFELY 327
>Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:36649387-36650467 | 20130731
Length = 316
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ SC L G Q H + GF ++ ++LI++Y++C L A +VF+ M ERN
Sbjct: 116 LKSCAGLSALRLGKQVHGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDGMCERNE 175
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
V+ + ++A F R + E+F+ ++ + F V+L+ C+
Sbjct: 176 VTWSTMMADFGMHGRFEEVFEMFNRMVEVG-----ERMDSVSFTVVLTACS 221
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 59/104 (56%), Gaps = 10/104 (9%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+S+ G R + H I +G+ +++VG++LI +Y++C + DA RVF+++ R+
Sbjct: 160 ALSAIGEGRSI------HEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRD 213
Query: 176 VVSRTVIIAGFAQEWRVD----MCLELFHPHLKYSIHTLLSIIS 215
V ++A +AQ D +C E+ ++ + TL+++IS
Sbjct: 214 AVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVIS 257
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 133 HCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRV 192
H GF+ + +V +SLI +YS + DAY+VF E R++VS V+I GF + +++
Sbjct: 136 HSQVFKYGFLVDSFVMNSLIRVYSVNDRVNDAYKVFCESGYRDIVSYNVMIDGFVKNFKL 195
Query: 193 DMCLELF 199
D ELF
Sbjct: 196 DRARELF 202
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C S D + GV + + G +VY+G+SLI ++ + L +A VF++MP ++
Sbjct: 106 LKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDG 165
Query: 177 VSRTVIIAGFAQEWRVDMCLELF 199
V +I+G +Q LE+F
Sbjct: 166 VCWNAMISGLSQSLNPCEALEMF 188
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 83 NPVGSNLATLRTTTEMSSVI-----EQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAI 137
N + S LA + E SV + EL ++ +S+C S++ G HC A+
Sbjct: 115 NSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAM 174
Query: 138 TTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP--ERNVVSRTVIIAGFAQ 188
G + V V ++L+++Y + + A+R+F EMP E+++VS I+A AQ
Sbjct: 175 KLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQ 227
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S+C L H +GF + V ++LI +Y++C L A VFE MP +NV
Sbjct: 361 ISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNV 420
Query: 177 VSRTVIIAGFAQEWRVDMCLELF 199
+S + +I FA D ++LF
Sbjct: 421 ISWSSMINAFAMHGNADSAIKLF 443
>Medtr8g065040.1 | PPR containing plant-like protein | HC |
chr8:27316294-27314321 | 20130731
Length = 657
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 17/127 (13%)
Query: 107 GVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIA-NVYVGSSLISLYSRCALLGDAY 165
GV C+L + C SKR + G H + GF+ NV+V ++L+ YS C A
Sbjct: 204 GVTFCYL---LRGCSSKRRFHEGEMIHSCVLKMGFVEYNVFVANALVDFYSSCGCFVSAR 260
Query: 166 RVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFP----FLV 221
+ FE + +V+S +++ +A V+ LE F+ + + H P F+
Sbjct: 261 KCFEGIKVEDVISWNSMVSVYADNNLVNDALEFFN---------FMQMWGHRPSVRSFIG 311
Query: 222 LLSHCTR 228
L+ C+R
Sbjct: 312 FLNLCSR 318
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q H + GF+ NV+VG +L+ Y L G A ++F+E+ ERN+ V+ GF +
Sbjct: 120 GSQVHSRVVKFGFLNNVFVGGALVGFYMNLGLSGVALKLFDELSERNLGVWNVMFRGFCE 179
>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:44985847-44989750 | 20130731
Length = 912
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCA-LLGDAYRVFEEMPERNVVSRTVIIAGFA 187
G Q+H I G ++Y+G++L+ +Y +C+ + +A +VF E+ NV+ T +IAGFA
Sbjct: 338 GEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFA 397
Query: 188 QEWRVDMCLELF 199
++ R++ +LF
Sbjct: 398 EK-RLEDSFQLF 408
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G Q HC ++ +GF V +SL+ LYS+C + DA R F+++ E + S +I+GF+
Sbjct: 540 GKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSW 599
Query: 189 EWRVDMCLELFH----PHLKYSIHTLLSIIS 215
+ L F +K TLLS+IS
Sbjct: 600 NGLISHALSTFDDMRLAGVKPDSITLLSLIS 630
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%)
Query: 133 HCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
H I GF ++V+V + L++LY++C +G A VF+ + +R +VS T I++G+ Q
Sbjct: 168 HAHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYGQ 223
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 105 ELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLA--ITTGFIANVYVGSSLISLYSRCALLG 162
EL D L +S+CG+ L G + H F ++ V ++L+ +Y++C +
Sbjct: 211 ELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGESISVFNALVDMYAKCGAVE 270
Query: 163 DAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELF 199
+AY F M +NVVS V+I GFA + L LF
Sbjct: 271 EAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALF 307
>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15028593-15026470 | 20130731
Length = 571
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 130 VQYHCLAITTGFI-----ANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIA 184
V Y L T G + + +VG++L+ +Y++C + DA +V+E M ++VV+ ++
Sbjct: 22 VGYGILPDTVGVVNILPVSGFFVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVT 81
Query: 185 GFAQEWRVDMCLELF----HPHLKYSIHTLLSIISHFP 218
G++Q R + L LF ++ + T S+IS +
Sbjct: 82 GYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYA 119
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 48/72 (66%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
++SSC + L G Q H L + +G+I +++V ++LI++Y++C + A +VF+++ +
Sbjct: 462 SLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVD 521
Query: 176 VVSRTVIIAGFA 187
++S +I+G+A
Sbjct: 522 LISWNSLISGYA 533
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S +++CG L G Q H L A + S+LI +YS+C L +A +FE +
Sbjct: 478 FSSVITACGGLCLLEYGQQIHGLICKASLDAESCIESALIDMYSKCGNLTEAKNIFERIS 537
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF----HPHLKYSIHTLLSII 214
+ V+ T II+ +AQ V+ L+LF +K + TLL I+
Sbjct: 538 NPDTVTWTAIISTYAQHGLVEDALQLFRKMEQSAVKANAVTLLCIL 583
>Medtr4g023520.1 | PPR repeat protein | LC | chr4:7956288-7959311 |
20130731
Length = 270
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 92 LRTTTEMSSVIEQELGVD---VCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVG 148
++ ++ S+ L +D + FL+HA C + G HC+ GF +++V
Sbjct: 54 IQKQRDIFSITSHTLSLDSFTLIFLAHA---CANLNTTQFGFHLHCIVFKMGFENHIFVQ 110
Query: 149 SSLISLYSRCALLGDAYRVFEEMPERNVVS 178
+ L+ +YS L DA +VF EMPERN
Sbjct: 111 TGLLHMYSNWGFLVDAAQVFGEMPERNTAG 140
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 116 AVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERN 175
A+SS + + G Q H I G V V +SL+ +YS CA L A ++F + +R
Sbjct: 324 AISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRT 383
Query: 176 VVSRTVIIAGFAQEWRVDMCLE 197
VVS + +I G+A D CLE
Sbjct: 384 VVSWSAMIKGYAMH---DNCLE 402
>Medtr3g117150.1 | organelle transcript processing protein, putative
| HC | chr3:54810037-54807667 | 20130731
Length = 571
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D S A+ SCG + Q H GF ++Y+ ++LI +YS L A +VF
Sbjct: 95 DTFTYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVF 154
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
+ M R+VVS T +IAGF ++LF L+ +
Sbjct: 155 DRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGV 193
>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0493:2001-4149 | 20130731
Length = 611
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 122 SKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS-RT 180
SKR G+Q H A GF +++VG++LIS+Y+ C A +VF+EM + NVV+
Sbjct: 128 SKRQ---GIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNA 184
Query: 181 VIIAGF-AQEWRV 192
V+ A F WRV
Sbjct: 185 VVTACFRCGMWRV 197
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 101 VIEQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 160
V E ++ D ++ +S+C L G + H + +GF +VY+GSSLI +Y++C
Sbjct: 234 VNEGKVVPDEVAITTVISACAHLGALGFGKEVHFYLMVSGFGIDVYIGSSLIDMYAKCGS 293
Query: 161 LGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFL 220
L + VF ++ E+N+ +I G A L +F + I + F+
Sbjct: 294 LERSLLVFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRP-----NRVTFV 348
Query: 221 VLLSHCT 227
+L+ CT
Sbjct: 349 SVLTACT 355
>Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:49468862-49466962 | 20130731
Length = 589
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+++C +L G + H L G+ +++ V SSLI +Y +C + +A +F+ M RNV
Sbjct: 131 INACSILANLETGRRIHALVEVFGYRSDLVVCSSLIDMYGKCNRVDEAQMIFDFMWVRNV 190
Query: 177 VSRTVIIAGFAQEWRVDMCLELF 199
VS T +I ++Q + + L+LF
Sbjct: 191 VSWTSMITTYSQNGQGHLALQLF 213
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 119 SCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
+C L G + HC ++ GF+ ++YV ++LI +YS L AY VF ++ E+ +
Sbjct: 574 ACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPC 633
Query: 179 RTVIIAGFA 187
++ G+A
Sbjct: 634 WNCMMMGYA 642
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+ +C D+ G H A+ T +++V+VG++LI++Y + + A +VF++MP+RN+
Sbjct: 203 IKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNL 262
Query: 177 VSRTVII 183
VS ++
Sbjct: 263 VSWNSVM 269
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 103 EQELGVDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLG 162
++ L DV + + C + ++ G+ +H LA+ G + V SSL+ +YS+C L
Sbjct: 292 DEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLC 351
Query: 163 DAYRVFEEMPERNVVSRTVIIAGFAQE 189
+A RV + E+NV+S +I G++++
Sbjct: 352 EA-RVLFDTNEKNVISWNSMIGGYSKD 377
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D+ ++ +S+C + L G + H + GF + ++ SL+SLY +C + A F
Sbjct: 501 DLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFF 560
Query: 169 EEMPERNVVSRTVIIAGFAQ-EWRVDMCLELFHPHLKYSI 207
+ M E+N+V +I GF+Q E+ D L++FH L I
Sbjct: 561 DNMEEKNLVCWNTMINGFSQNEFPFD-ALDMFHQMLSSKI 599
>Medtr5g025580.1 | PPR containing plant-like protein | HC |
chr5:10385696-10382561 | 20130731
Length = 767
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIAN--VYVGSSLISLYSRCALLGDAYRVFEE 170
LS A+S+C S +L G H I G+ N V V +SLISLYS+C + A VF E
Sbjct: 116 LSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFRE 175
Query: 171 MPERNVVSRTVIIAGFAQEWRVDMCLELF 199
M +++VS ++ G+A + +L
Sbjct: 176 MAYKDIVSWNAMMEGYASNENIHEAFDLM 204
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 139 TGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLEL 198
G +V +G+++I +Y++C + A VF+ M E+NV+S + +IA + + L+L
Sbjct: 230 NGLSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEKNVISWSAMIAAYGYHGKGKEALDL 289
Query: 199 FHPHLKYSIHTLLSIISHFPFLVLLSHCT 227
FH L I + F+ LL C+
Sbjct: 290 FHMMLSCGISP-----NRITFVSLLYACS 313
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ + +C S + Q H +I NVYVG+SL YS+C + A VF P
Sbjct: 531 LASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTP 590
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
E+N V+ T ++ + Q L L+ L+ I F+ +LS C
Sbjct: 591 EKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRP-----DAVTFVAILSAC 639
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
L+ +S C L G + H G V +G++L+ +Y++ + A ++F+EMP
Sbjct: 243 LASVLSVCARSGCLELGERIHEFMRVKGVEVGVILGTALVYMYAKNGDILTARKLFDEMP 302
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELF 199
ERNVV+ +I G A V+ L LF
Sbjct: 303 ERNVVTWNAMICGLASHGHVEDALGLF 329
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 129 GVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
G+Q A G NV V +S++++YSRC L+ +A F+ + +++++S ++A FAQ
Sbjct: 530 GMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQ 589
Query: 189 EWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHCTRI 229
++ F LK +H ++ +LS C+ +
Sbjct: 590 NGLGIKVIDTFEDMLKTECKP-----NHISYVSVLSGCSHM 625
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 109 DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVF 168
D + + +S+C L G+ H +V +G++L+ +Y++C + A +VF
Sbjct: 390 DKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVF 449
Query: 169 EEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIISHFPFLVLLSHC 226
EE+P+RN ++ T +I G A L F + I + FL +LS C
Sbjct: 450 EEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGI-----VPDEITFLGVLSAC 502
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 54/99 (54%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+SSC +DL G ++HC G + + ++L+ +Y +C L A +F+ M ++ +
Sbjct: 266 ISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTL 325
Query: 177 VSRTVIIAGFAQEWRVDMCLELFHPHLKYSIHTLLSIIS 215
VS T ++ G+A+ +D+ E+ + + S+ +IIS
Sbjct: 326 VSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIIS 364
>Medtr7g108530.1 | PPR containing plant-like protein | HC |
chr7:44212645-44210679 | 20130731
Length = 467
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 122 SKRDLYGGVQYHCL---AITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVS 178
S D + VQ C+ I G++ ++YV +SL+ +Y+ L ++F+EMP+R+VVS
Sbjct: 118 SLSDSHDFVQSQCVYTHVIKLGYVNDIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVS 177
Query: 179 RTVIIAGFAQEWRVDMCLELF 199
TV+I G+ + + L +F
Sbjct: 178 WTVMIMGYRNGGKYNDALLVF 198
>Medtr5g043920.1 | PPR containing plant-like protein | HC |
chr5:19295539-19293687 | 20130731
Length = 498
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%)
Query: 117 VSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNV 176
+S C L G H I G + +V++G++L+ +Y + LG A VFE M +RNV
Sbjct: 219 LSVCAELGYLSLGRWVHSQLILKGMVLSVHLGTALVDMYGKSGALGYARVVFERMEKRNV 278
Query: 177 VSRTVIIAGFAQEWRVDMCLELF 199
+ + +I G AQ + L LF
Sbjct: 279 WTWSAMIMGLAQHGFAEEALVLF 301
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 108 VDVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRV 167
+D L +S+C DL G H A+V + ++L+ +Y+ C ++ +AYR+
Sbjct: 244 LDQVVLVAVLSACAELGDLKLGRWIHWYVQERQRQASVRLNNALMHMYASCGIIDEAYRM 303
Query: 168 FEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLKYSI 207
F +M + VS T+II FA++ L+LF L +
Sbjct: 304 FTKMSWKTTVSWTIIIMAFAKQGLGKEALDLFKDMLSDGV 343
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 104 QELGV--DVCFLSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALL 161
E+GV D S+C L G + ++ G NV +G+SLI+++SRC +
Sbjct: 209 NEMGVCPDSATFVSVSSACSQIGSLELGCWVYDSIVSNGIRVNVILGTSLINMFSRCGDV 268
Query: 162 GDAYRVFEEMPERNVVSRTVIIAGFAQEWRVDMCLELFHPHLK 204
A VF+ + E NV++ T +I+G+ +ELF+ K
Sbjct: 269 RRARAVFDSISEGNVIAWTAMISGYGMHGYGVEAMELFYEMKK 311
>Medtr4g087150.1 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 724
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S +S+C L+ G Q H L +G+ VGS+L+ Y +C + +A VFEE+
Sbjct: 106 FSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELR 165
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHP 201
+ N V ++++AG+ Q + +E+F
Sbjct: 166 DENHVLWSLMLAGYVQRDMIGDAMEIFEK 194
>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:9292413-9288471 | 20130731
Length = 1125
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 128 GGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFA 187
G Q H + G ++NV+VG+SL+ Y + +A ++FEE+ E N+VS T ++ +A
Sbjct: 267 GARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYA 326
Query: 188 QEWRVDMCLELFHPHLKYS 206
L ++ HL+++
Sbjct: 327 DNGHTKEVLNIYR-HLRHN 344
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 144 NVYVGSSLISLYSRCALLGDAYRVFEEMPERNVVSRTVIIAGFAQ 188
++ V +SLIS+YSRC + DA +F+EM R++VS +I+GFA+
Sbjct: 438 SISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAE 482
>Medtr4g087150.2 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 576
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%)
Query: 113 LSHAVSSCGSKRDLYGGVQYHCLAITTGFIANVYVGSSLISLYSRCALLGDAYRVFEEMP 172
S +S+C L+ G Q H L +G+ VGS+L+ Y +C + +A VFEE+
Sbjct: 106 FSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELR 165
Query: 173 ERNVVSRTVIIAGFAQEWRVDMCLELFHP 201
+ N V ++++AG+ Q + +E+F
Sbjct: 166 DENHVLWSLMLAGYVQRDMIGDAMEIFEK 194