Miyakogusa Predicted Gene

Lj0g3v0120679.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0120679.2 Non Characterized Hit- tr|I3SA77|I3SA77_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.96,0,Translin,Translin; seg,NULL; TRANSLIN ASSOCIATED FACTOR
X,NULL; TRANSLIN AND TRANSLIN ASSOCIATED PRO,CUFF.7179.2
         (194 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g066180.1 | translin-associated factor X | HC | chr8:27492...   309   1e-84

>Medtr8g066180.1 | translin-associated factor X | HC |
           chr8:27492249-27496293 | 20130731
          Length = 294

 Score =  309 bits (792), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 146/181 (80%), Positives = 159/181 (87%)

Query: 14  MRDSFAKYAQYLNDLNEKRERVVKASRDVTMNSKKVIFQVHRMSKYNKLEVLEKAEKDLA 73
           M++ F KY +YLN+LN+KRERVVKASRD+TMNSKKVIFQVHRMSKYNK EVLEKAEKDLA
Sbjct: 56  MKEPFTKYTEYLNNLNDKRERVVKASRDITMNSKKVIFQVHRMSKYNKDEVLEKAEKDLA 115

Query: 74  AVRDQHISRLVRELQGTDFWKLRRAYSPGIQEYVEAATFCSFCTSGTLLKLDEINNTXXX 133
           AV +QH+SRLV+ELQGTDFWKLRRAYSPGIQEYVEAATFCSFC +GTLLKLDEIN T   
Sbjct: 116 AVTNQHVSRLVKELQGTDFWKLRRAYSPGIQEYVEAATFCSFCKNGTLLKLDEINKTLLP 175

Query: 134 XXXXXXXXXXINILDYLLGLADLTGELMRLAIGRISDGEIQFAEKICRFVRDIYRELTLV 193
                     INILDY+LGLADLTGELMRLAIGRISDGE++FAEKIC F RDIYRELTLV
Sbjct: 176 LSDPSLQPLQINILDYILGLADLTGELMRLAIGRISDGELEFAEKICSFARDIYRELTLV 235

Query: 194 V 194
           V
Sbjct: 236 V 236