Miyakogusa Predicted Gene

Lj0g3v0120679.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0120679.1 Non Characterized Hit- tr|K4BND7|K4BND7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,83.33,0.000000000000002,Translin,Translin; seg,NULL; TRANSLIN
ASSOCIATED FACTOR X,NULL; TRANSLIN AND TRANSLIN ASSOCIATED
PRO,CUFF.7179.1
         (158 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g066180.1 | translin-associated factor X | HC | chr8:27492...   183   7e-47

>Medtr8g066180.1 | translin-associated factor X | HC |
           chr8:27492249-27496293 | 20130731
          Length = 294

 Score =  183 bits (464), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 94/147 (63%), Positives = 107/147 (72%), Gaps = 5/147 (3%)

Query: 1   MLHSFPSSLHIHRVSLFMAASKPQRLFQRTDVQ---SSPKXXXXXXXXXXXXXXXXXXXD 57
           ML SF SS H  R+SLFMA+ K QRL Q T      +S +                   +
Sbjct: 1   MLRSFSSSFH--RLSLFMASEKTQRLHQITGTNFQNTSKRPKTMSIATDTATVTDSAMKE 58

Query: 58  SFAKYAQYLNDLNEKRERVVKASRDVTMNSKKVIFQVHRMSKYNKLEVLEKAEKDLAAVR 117
            F KY +YLN+LN+KRERVVKASRD+TMNSKKVIFQVHRMSKYNK EVLEKAEKDLAAV 
Sbjct: 59  PFTKYTEYLNNLNDKRERVVKASRDITMNSKKVIFQVHRMSKYNKDEVLEKAEKDLAAVT 118

Query: 118 DQHISRLVRELQGTDFWKLRRAYSPGV 144
           +QH+SRLV+ELQGTDFWKLRRAYSPG+
Sbjct: 119 NQHVSRLVKELQGTDFWKLRRAYSPGI 145