Miyakogusa Predicted Gene

Lj0g3v0118999.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0118999.1 Non Characterized Hit- tr|J3MFM4|J3MFM4_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB06G2,31.5,4e-19,seg,NULL; coiled-coil,NULL; UBN2_3,NULL;
OS03G0835200 PROTEIN,NULL; GAG-POL-RELATED
RETROTRANSPOSON,,CUFF.7039.1
         (217 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g064580.1 | leucine-rich receptor-like kinase family prote...    63   2e-10

>Medtr2g064580.1 | leucine-rich receptor-like kinase family protein,
           putative | LC | chr2:29342287-29340095 | 20130731
          Length = 605

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 24/37 (64%), Positives = 32/37 (86%)

Query: 21  SVKLDRGNYKLWRSLVLPLLRGQKLDGYIFGTKKCPD 57
           SVKLDR NY LW+S+VLP++RG +LDGY+ G K+CP+
Sbjct: 566 SVKLDRDNYPLWKSMVLPIIRGARLDGYMLGKKECPE 602