Miyakogusa Predicted Gene

Lj0g3v0118389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0118389.1 CUFF.6981.1
         (246 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g491560.1 | defective in meristem silencing protein | HC |...   395   e-110
Medtr7g117665.1 | defective in meristem silencing protein | HC |...   266   1e-71
Medtr7g117665.2 | defective in meristem silencing protein | HC |...   266   2e-71
Medtr1g007990.1 | gamma-irradiation and mitomycin C induced prot...   137   9e-33
Medtr1g008050.1 | gamma-irradiation and mitomycin C induced prot...   137   9e-33

>Medtr3g491560.1 | defective in meristem silencing protein | HC |
           chr3:41658103-41651940 | 20130731
          Length = 417

 Score =  395 bits (1016), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 185/224 (82%), Positives = 204/224 (91%)

Query: 3   AIVCRTYEGVKALEMYDKEGCINKSSGLHGLGPSIGRPLDGRFLVICLESLRPYTGKYFL 62
           AIVCRTYEGVKALE+YDKEG INKS GLHGLG SIGRPLDGRFLVICLESLRPY GKY +
Sbjct: 176 AIVCRTYEGVKALELYDKEGYINKSCGLHGLGASIGRPLDGRFLVICLESLRPYAGKYVV 235

Query: 63  DDSERKLDILKPRLPNGECPPGFLGFAVNMINIDSWNLFCVTPSGYGLRETLFYNLFSRL 122
           DDS+RKLDIL PRLPNGECP GF+GFAVNMINID+  LFC+TPSGYGLRETLFYNLFSRL
Sbjct: 236 DDSQRKLDILNPRLPNGECPAGFIGFAVNMINIDNRYLFCLTPSGYGLRETLFYNLFSRL 295

Query: 123 QVYKTRAEMIQALPCISDGALSLDGGMVRSCGVFSLGNREDVDVKFPKPDRSTELDGEIE 182
           QVYKTRAEMIQALPCISDGALSLDGGM+RSCGVFSLGNRE VDV+FP+P+R   LD  IE
Sbjct: 296 QVYKTRAEMIQALPCISDGALSLDGGMIRSCGVFSLGNREAVDVRFPRPERPLGLDQHIE 355

Query: 183 TERQMKDIKWKKEKVLEDLKRERTLLDMAKFNFGKKKNDFLKFL 226
            ERQM + +WKK+KV +DLKRE+T+LDMAKF+F KKK+DFLK+L
Sbjct: 356 MERQMMNTQWKKDKVFDDLKREKTMLDMAKFSFNKKKSDFLKYL 399


>Medtr7g117665.1 | defective in meristem silencing protein | HC |
           chr7:48828885-48823621 | 20130731
          Length = 383

 Score =  266 bits (681), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 125/213 (58%), Positives = 165/213 (77%), Gaps = 1/213 (0%)

Query: 1   MRAIVCRTYEGVKALEMYDKEGCINKSSGLHGLGPSIGRPLDGRFLVICLESLRPYTGKY 60
           M AIVC T EGVKALE YD EG +N + GLHG+G S G+ ++GRF+VICLE LRP+ G +
Sbjct: 157 MLAIVCSTNEGVKALEKYDPEGTVNSTGGLHGIGSSTGKKINGRFVVICLEDLRPFVGGF 216

Query: 61  FLDDSERKLDILKPRLPNGECPPGFLGFAVNMINIDSWNLFCVTPSGYGLRETLFYNLFS 120
             +D ++KL I KPRLPNGECPPGFL +AVNMI++DS  L  +T SG+GLRETLFY+LFS
Sbjct: 217 VENDPQKKLAIPKPRLPNGECPPGFLDYAVNMIHLDSNRLSFLTASGHGLRETLFYSLFS 276

Query: 121 RLQVYKTRAEMIQALPCISDGALSLDGGMVRSCGVFSLGNREDVDVKFPKPDRSTELDGE 180
           RLQ+YKTR EM+ ALPCI+DGALSLDGGM+R CG+F+LG+R+DV+VKFP     +++  +
Sbjct: 277 RLQIYKTRNEMMLALPCITDGALSLDGGMIRKCGIFALGSRKDVEVKFPLIAGESDVPPD 336

Query: 181 -IETERQMKDIKWKKEKVLEDLKRERTLLDMAK 212
             E E  ++ ++W+  K+  D++RE+ LLD  K
Sbjct: 337 YTEAEDVVRKLQWETSKLAADIQREQQLLDFRK 369


>Medtr7g117665.2 | defective in meristem silencing protein | HC |
           chr7:48828878-48823621 | 20130731
          Length = 397

 Score =  266 bits (679), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 125/213 (58%), Positives = 165/213 (77%), Gaps = 1/213 (0%)

Query: 1   MRAIVCRTYEGVKALEMYDKEGCINKSSGLHGLGPSIGRPLDGRFLVICLESLRPYTGKY 60
           M AIVC T EGVKALE YD EG +N + GLHG+G S G+ ++GRF+VICLE LRP+ G +
Sbjct: 171 MLAIVCSTNEGVKALEKYDPEGTVNSTGGLHGIGSSTGKKINGRFVVICLEDLRPFVGGF 230

Query: 61  FLDDSERKLDILKPRLPNGECPPGFLGFAVNMINIDSWNLFCVTPSGYGLRETLFYNLFS 120
             +D ++KL I KPRLPNGECPPGFL +AVNMI++DS  L  +T SG+GLRETLFY+LFS
Sbjct: 231 VENDPQKKLAIPKPRLPNGECPPGFLDYAVNMIHLDSNRLSFLTASGHGLRETLFYSLFS 290

Query: 121 RLQVYKTRAEMIQALPCISDGALSLDGGMVRSCGVFSLGNREDVDVKFPKPDRSTELDGE 180
           RLQ+YKTR EM+ ALPCI+DGALSLDGGM+R CG+F+LG+R+DV+VKFP     +++  +
Sbjct: 291 RLQIYKTRNEMMLALPCITDGALSLDGGMIRKCGIFALGSRKDVEVKFPLIAGESDVPPD 350

Query: 181 -IETERQMKDIKWKKEKVLEDLKRERTLLDMAK 212
             E E  ++ ++W+  K+  D++RE+ LLD  K
Sbjct: 351 YTEAEDVVRKLQWETSKLAADIQREQQLLDFRK 383


>Medtr1g007990.1 | gamma-irradiation and mitomycin C induced protein
           | LC | chr1:656620-665586 | 20130731
          Length = 1009

 Score =  137 bits (345), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 117/199 (58%), Gaps = 20/199 (10%)

Query: 1   MRAIVCRTYEGVKALEMYDKEGCINKSSGLHGL-GPSIGRPLDGRFLVICLESLRPYTGK 59
           M  ++CR+ +   +LE Y + G I+    L+     S+G+ +  RF V+  E +RPY G 
Sbjct: 760 MLGVICRSLDTAISLEKYKQNGEIDYVHALNAAEAASLGKAISRRFHVMGFEDIRPYRGN 819

Query: 60  YFLDDSERKLDILKPRLPNGECPPGFLGFAVNMINIDSWNLFCVTPSGYGLRETLFYNLF 119
              +DS+RKL +  P+L N   P GF+G+AVNMI +++ +L   T SG+GLRET+ ++LF
Sbjct: 820 -LQNDSQRKLALPDPKLSN-RTPEGFMGYAVNMIELNTHHLQARTASGHGLRETVLFSLF 877

Query: 120 SRLQVYKTRAEMIQALPCISDGALSLDGGMVRSCGVFSL-----------GNREDVDVKF 168
            +L VYKT   M+ A+ CI +GA+SLDGG++R  G  SL           GN+ D+    
Sbjct: 878 KKLHVYKTSESMMAAIECIENGAVSLDGGIIRENGTLSLGFGNPYIYFPCGNKMDI---- 933

Query: 169 PKPDRSTELDGEIETERQM 187
             P  +T++  +IE ++ +
Sbjct: 934 --PPEATQMLNQIEKKKAL 950


>Medtr1g008050.1 | gamma-irradiation and mitomycin C induced protein,
            putative | HC | chr1:683455-698554 | 20130731
          Length = 1462

 Score =  137 bits (345), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 103/162 (63%), Gaps = 10/162 (6%)

Query: 1    MRAIVCRTYEGVKALEMYDKEG---CINKSSGLHGLGPSIGRPLDGRFLVICLESLRPYT 57
            M  ++CR+++   A+ +Y + G   C++  +   GLG +I   +  RFLV+  E LRPY 
Sbjct: 1221 MLGVICRSFD--TAVSLYKQNGEIDCLHAEAA--GLGEAI---ISKRFLVMSFEDLRPYK 1273

Query: 58   GKYFLDDSERKLDILKPRLPNGECPPGFLGFAVNMINIDSWNLFCVTPSGYGLRETLFYN 117
            G     D + KL +  P+L NG  P GF+G+AVNMI++DS +L   T  G+GLRET+ ++
Sbjct: 1274 GYLQEHDPQMKLALPNPKLHNGRTPAGFIGYAVNMIDLDSHHLQTRTALGHGLRETVLFS 1333

Query: 118  LFSRLQVYKTRAEMIQALPCISDGALSLDGGMVRSCGVFSLG 159
            LF +L VY+TR  M+ AL CI DGA+SLDGG++R     S+G
Sbjct: 1334 LFKKLHVYETRENMVDALDCIEDGAVSLDGGIIRENRALSIG 1375