Miyakogusa Predicted Gene

Lj0g3v0116489.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0116489.1 Non Characterized Hit- tr|G7IVU1|G7IVU1_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,61.16,0,seg,NULL; no description,NULL; BRCT,BRCT domain;
breast cancer carboxy-terminal domain,BRCT domain,CUFF.6860.1
         (1044 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g013490.1 | hypothetical protein | HC | chr3:3630934-36419...  1189   0.0  

>Medtr3g013490.1 | hypothetical protein | HC | chr3:3630934-3641918 |
            20130731
          Length = 1081

 Score = 1189 bits (3076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 668/1096 (60%), Positives = 762/1096 (69%), Gaps = 100/1096 (9%)

Query: 1    MATQALPPPNFSEDAAWLPCWLQNLG--------KVSQAPSDLAAKDLVPSQENGGGGKD 52
            MATQ L PP FSED AW+P WLQNL         K SQAPS+ A KDL PS + G   KD
Sbjct: 1    MATQTLRPPYFSEDVAWVPSWLQNLRNDGFNEYVKDSQAPSNQAEKDLAPSPKYGIDVKD 60

Query: 53   FN--AREEDRYKSCHLFLSGDDSSPFSVAPSPGNVFHFSLRLSSDVDSFFYPTQDLNQSH 110
             +  +REE  Y+SCHLFLSG DSS  SVAPSPGNVF FSL LSSDVDS F  TQDLNQSH
Sbjct: 61   VDVLSREEGGYRSCHLFLSGSDSSSLSVAPSPGNVFQFSLHLSSDVDSLFCSTQDLNQSH 120

Query: 111  DAVAPSKAVSSQLAQPSKDCREKLHSVSYHR----------------------------- 141
             AVAPSKA+S Q AQ S D  E +HS++ ++                             
Sbjct: 121  HAVAPSKALSLQPAQTSVDFGENMHSMTGNQSLHAVAPSEALSLQSAQTSVDFGENMHSM 180

Query: 142  ----ACEQDVLAA--PEIVEKDASISPMDITHISDSVRHQQEKSEVDRCKSADVSNAVEL 195
                ACEQDV+A   PE  +K++  S   + H  DSV+ Q+EK + +  +S D+S+AVEL
Sbjct: 181  TGNHACEQDVMATFIPETKKKNSLKS---LIHTFDSVKQQKEKPKDECFESNDISDAVEL 237

Query: 196  SIAASEALVIHDLVKMESVSET-STEAVLEVALRVKQARLEGLEXXXXXXXXXXXXXXXX 254
            SIAASEALVIHDLVKMESVSET STEAVLE+ALRVKQARLEGLE                
Sbjct: 238  SIAASEALVIHDLVKMESVSETLSTEAVLEIALRVKQARLEGLEDGFFSSSMESDCSDSL 297

Query: 255  XXXXXXXMEDAYKDIGLSIGVSFEENLCSPAIFQAKGVSSAENYDGRNHKHSDRGLTSQL 314
                   MEDAY DIGL +GVS  ENL +  +F AKGVS  ENY+  N+KH+DR LTSQL
Sbjct: 298  SDLNDFLMEDAYADIGLPVGVSCGENLSNSNVFHAKGVSGDENYNEGNNKHNDRELTSQL 357

Query: 315  ANFDDKSQPNQLEVHVELEMQQNTDSSLDSVHGESEMHSNDPGLGANTPQDFANALLMPH 374
            A FDDKS+  + EV+VE E Q+  DS   S+ GE  MHS+ P L ANTP  F N LL  +
Sbjct: 358  AKFDDKSEQKKCEVNVEAEAQRIPDSPPHSLCGERVMHSDHPDLAANTPIHFVNDLLTSN 417

Query: 375  QYIE-NNTNVLALNQALALTMDDLTSIKQQNSVNSSFVETSGSSKKENWATYLAPERFRS 433
            Q+ E NNTN L L++                                   TYLAPERFRS
Sbjct: 418  QFKEKNNTNDLPLSKV----------------------------------TYLAPERFRS 443

Query: 434  RWLGGWTSKELDSSSLNRNNAERI----PKFVARETSFLTESVDIVPDENSCVLKPDPKC 489
            RWLG       +S+ +  +   R+    PK V RETSFLTESVDIVPDE+SCVLK DPK 
Sbjct: 444  RWLG-------ESADIIPDENSRLLKHDPKCV-RETSFLTESVDIVPDESSCVLKHDPKR 495

Query: 490  ARSSQLSMASESIHNKPDESVLHSQDVVTCSNLSLVDPLCSVVPCSIASEHANDKNHADK 549
            A SSQLSM  E  HNKPDE VLHSQD+V CS+LSL DPLCSVVPCS ASEH N K H DK
Sbjct: 496  AISSQLSMHCEGSHNKPDEGVLHSQDMVGCSSLSLNDPLCSVVPCSFASEHDNYKTHIDK 555

Query: 550  ENDTEDFVPSTSEFEVDNFQRISDKNFTCDSRDKKIMSILDGEDIPITPIEVVKQMSEKL 609
            END E   P  S+FEVDN QRISDKN T D RD+KI SI+DG+DI +T  EVV+QMSEKL
Sbjct: 556  ENDIEYLAPLVSDFEVDNCQRISDKNTTFDCRDEKITSIIDGKDILLTSTEVVEQMSEKL 615

Query: 610  TRVEHTGLKTYSMILPNQALNLNCNLRPFPTEQSR-DGASLSTRIPESP-ASKQADGNKN 667
            TRVEHT LKTYSMIL NQ +N NCN  P  T QS    ASL TR+ ESP A + ++ NKN
Sbjct: 616  TRVEHTCLKTYSMILQNQDVNQNCNSTPLSTNQSDIAAASLGTRVSESPSAFEHSNENKN 675

Query: 668  EENHLYLVDHTSVKEITDDQSDXXXXXXXXXXQERRSPLILNHRMRRRLVGAKNVVNDIS 727
            E NH +L+D  S+ +ITDD+SD           ERRSP+ LNHR R RL+G K  VNDIS
Sbjct: 676  EVNHQHLIDQKSIIQITDDKSDELKASELT--HERRSPINLNHRTRHRLLGPKTSVNDIS 733

Query: 728  TETNIKQNEVPEAAVQPQQNNNLKELQLECNKIHGRHVRVRKQVRFSEKVEELHQKRKFS 787
             E NI Q  V E  VQ QQNNNL ++Q+ECNK    HV+VRKQV FS+KVEELHQKRK S
Sbjct: 734  IEKNINQYVVAETVVQHQQNNNLIKVQVECNKSVDGHVKVRKQVHFSDKVEELHQKRKLS 793

Query: 788  KLESSLKRCSSVTAKRPRASKSLTTSVPHKKNSLTNYCRSVVNEFIFKGTEFLLTGLSSQ 847
            KLESS K+CSS+ AKR R SK+LTTS PH K+SLT+YCR   NEFIF+G EFLLTGLSSQ
Sbjct: 794  KLESSDKKCSSIRAKRQRVSKTLTTSAPHMKHSLTDYCRGARNEFIFRGREFLLTGLSSQ 853

Query: 848  KERDTEALIRNSGGVVLFDIPSPPNSRGKRSSTLSRMQLPIILCRKKLQTIKFLYGCAVG 907
            KER+ EALIRNSGGV+L+DIPSPPNS+GKRSSTLS +QLPIILC KKLQT KFLYGCAVG
Sbjct: 854  KERELEALIRNSGGVILYDIPSPPNSKGKRSSTLSCLQLPIILCNKKLQTAKFLYGCAVG 913

Query: 908  ASILKVDWLNDCLASGTILQPEKYMILPNRKDMQWTSIGTAVRHRNRKHVFERVGVMLHG 967
            ASIL+VDWL DCLASGTIL PEKYMILPNR DM+WT  G AV  RN+KH+FERVG+MLHG
Sbjct: 914  ASILRVDWLTDCLASGTILLPEKYMILPNRNDMKWTRSGKAVHRRNQKHIFERVGIMLHG 973

Query: 968  KPSFCTKLACIIKHGGGQVFKTLQWLVRSTDEQRTSVGVIVIEDKATISRHLKHCALERA 1027
            K SFCTK ACIIKHGGG+ FKTLQWLVRSTDE+RT +G IV+E+KATISRHLK CALER 
Sbjct: 974  KHSFCTKFACIIKHGGGRAFKTLQWLVRSTDEERTLMGAIVVEEKATISRHLKSCALERD 1033

Query: 1028 IPTMPCSWIIESLYLG 1043
            IP M  SWII+SLY G
Sbjct: 1034 IPIMTSSWIIKSLYSG 1049