Miyakogusa Predicted Gene

Lj0g3v0116309.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0116309.1 Non Characterized Hit- tr|Q9M3Z6|Q9M3Z6_CICAR
Putative Ruv DNA-helicase OS=Cicer arietinum PE=2
SV=1,97.65,0,SUBFAMILY NOT NAMED,NULL; RUVB-RELATED REPTIN AND
PONTIN,NULL; TIP49,TIP49, C-terminal; no descripti,CUFF.6829.1
         (214 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g104080.1 | DNA helicase TIP49 TBP-interacting protein | H...   422   e-119
Medtr6g023370.1 | DNA helicase TIP49 TBP-interacting protein | H...   348   2e-96
Medtr3g104080.2 | DNA helicase TIP49 TBP-interacting protein | H...   229   1e-60
Medtr3g061640.1 | P-loop nucleoside triphosphate hydrolase super...   149   3e-36

>Medtr3g104080.1 | DNA helicase TIP49 TBP-interacting protein | HC |
           chr3:47958173-47951407 | 20130731
          Length = 458

 Score =  422 bits (1086), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/214 (96%), Positives = 213/214 (99%)

Query: 1   MEKMRIEEVQSTTKKQRVATHTHIKGLGLEASGKALPFASGFVGQAEAREACGLVVDMIR 60
           MEKM+IEEVQSTTKKQRVATHTHIKGLGLE SGKA+PFASGFVGQA+AREACGLVVDMIR
Sbjct: 1   MEKMKIEEVQSTTKKQRVATHTHIKGLGLEVSGKAVPFASGFVGQADAREACGLVVDMIR 60

Query: 61  QKKMAGRALLLAGPPGTGKTALALGICQELGTKVPFCPMVGSEVYSSEVKKTEVLMENFR 120
           QKKMAG+ALLLAGPPGTGKTALALGICQELGTKVPFCPMVGSEVYS+EVKKTEVLMENFR
Sbjct: 61  QKKMAGKALLLAGPPGTGKTALALGICQELGTKVPFCPMVGSEVYSTEVKKTEVLMENFR 120

Query: 121 RAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY 180
           RAIGLRIKENKEVYEGEVTELSPEETES+TGGYGKSISHVIIGLKTVKGTKQLKLDPTIY
Sbjct: 121 RAIGLRIKENKEVYEGEVTELSPEETESITGGYGKSISHVIIGLKTVKGTKQLKLDPTIY 180

Query: 181 DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFAT 214
           DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFAT
Sbjct: 181 DALIKEKVAVGDVIYIEANSGAVKRVGRSDAFAT 214


>Medtr6g023370.1 | DNA helicase TIP49 TBP-interacting protein | HC |
           chr6:8152582-8155828 | 20130731
          Length = 433

 Score =  348 bits (894), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 179/211 (84%), Positives = 184/211 (87%), Gaps = 20/211 (9%)

Query: 4   MRIEEVQSTTKKQRVATHTHIKGLGLEASGKALPFASGFVGQAEAREACGLVVDMIRQKK 63
           M+IEEVQSTTKKQRVATHTHIKGLGLE SGKALPFASGFVGQAEAREACGLVVDMIRQKK
Sbjct: 1   MKIEEVQSTTKKQRVATHTHIKGLGLEVSGKALPFASGFVGQAEAREACGLVVDMIRQKK 60

Query: 64  MAGRALLLAGPPGTGKTALALGICQELGTKVPFCPMVGSEVYSSEVKKTEVLMENFRRAI 123
           MAG+ALLLAGPPGTGKTALALGICQ++   V                    LMENFRRAI
Sbjct: 61  MAGKALLLAGPPGTGKTALALGICQDILNGV--------------------LMENFRRAI 100

Query: 124 GLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIYDAL 183
           GLRIKENKEVYEGEVTELSPEETES+T  YGKSISHVIIGLKTVKGTKQLKLDPTIYDAL
Sbjct: 101 GLRIKENKEVYEGEVTELSPEETESITEDYGKSISHVIIGLKTVKGTKQLKLDPTIYDAL 160

Query: 184 IKEKVAVGDVIYIEANSGAVKRVGRSDAFAT 214
           IKEKVAV DVIYIEANSGAVKRVGRSDAFAT
Sbjct: 161 IKEKVAVRDVIYIEANSGAVKRVGRSDAFAT 191


>Medtr3g104080.2 | DNA helicase TIP49 TBP-interacting protein | HC |
           chr3:47958148-47951408 | 20130731
          Length = 360

 Score =  229 bits (584), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 114/116 (98%), Positives = 116/116 (100%)

Query: 99  MVGSEVYSSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSIS 158
           MVGSEVYS+EVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEETES+TGGYGKSIS
Sbjct: 1   MVGSEVYSTEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEETESITGGYGKSIS 60

Query: 159 HVIIGLKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFAT 214
           HVIIGLKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFAT
Sbjct: 61  HVIIGLKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDAFAT 116


>Medtr3g061640.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr3:24606207-24601804 |
           20130731
          Length = 465

 Score =  149 bits (375), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/216 (43%), Positives = 139/216 (64%), Gaps = 18/216 (8%)

Query: 1   MEKMRIEEVQSTTKKQRVATHTHIKGLGLEASGKALPFASGFVGQAEAREACGLVVDMIR 60
           M ++++ E +  T+ +RV  H+HI+GLGL++S +    + G VGQ  AR+A G+++ MI+
Sbjct: 1   MTELKLSETRDLTRIERVGAHSHIRGLGLDSSLEPRAVSEGMVGQVSARKAAGVILQMIK 60

Query: 61  QKKMAGRALLLAGPPGTGKTALALGICQELGTKVPFCPMVGSEVYSSEVKKTEVLMENFR 120
             K+AGRA+LLAG PGTGKTA+A+G+ + LG + PF  + GSE++S E+ KTE L + FR
Sbjct: 61  DGKIAGRAVLLAGQPGTGKTAIAMGMAKSLGLETPFAMIAGSELFSLEMSKTEALTQAFR 120

Query: 121 RAIGLRIKENKEVYEGEVTELSPEETESVTGGYGKSISHVIIGLKTVKGTKQLKLDPTIY 180
           +AIG+RIKE  EV EGEV E+  +   +V G   K+      G  T+K T+      T+Y
Sbjct: 121 KAIGVRIKEETEVIEGEVVEVQIDRP-AVAGAAAKT------GKLTLKSTEM----ETVY 169

Query: 181 D-------ALIKEKVAVGDVIYIEANSGAVKRVGRS 209
           D       A+ KEKV  GDVI I+  SG + ++GRS
Sbjct: 170 DLGAKMIEAIGKEKVTSGDVIAIDKASGKITKLGRS 205