Miyakogusa Predicted Gene

Lj0g3v0116189.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0116189.1 Non Characterized Hit- tr|I1J7R6|I1J7R6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,71.94,0,SSRCOGNITION,Structure-specific recognition protein;
STRUCTURE SPECIFIC RECOGNITION PROTEIN,NULL;
SW,NODE_69851_length_1065_cov_69.243195.path2.1
         (352 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g022345.2 | FACT complex subunit SSRP1 | HC | chr1:7068528...   479   e-135
Medtr1g022345.1 | FACT complex subunit SSRP1 | HC | chr1:7068528...   479   e-135
Medtr5g082570.1 | FACT complex subunit SSRP1 | HC | chr5:3550256...   459   e-129

>Medtr1g022345.2 | FACT complex subunit SSRP1 | HC |
           chr1:7068528-7074782 | 20130731
          Length = 643

 Score =  479 bits (1232), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 244/336 (72%), Positives = 270/336 (80%), Gaps = 23/336 (6%)

Query: 19  KDSFREKSFHMPNSNTQYVSDEIMPMADVGDEIMPMADVGDVIMPMADVGDEIMPMADVD 78
           KDS  E SFH+P+SNTQ+V DE  P A V                     DEIM MADV 
Sbjct: 162 KDSLMEMSFHVPSSNTQFVGDEDRPPAQV-------------------FRDEIMSMADVG 202

Query: 79  AGGEDAVVTFEGIGIFTPRGRYSVELHLSFFRLRGPANDFKIQYSSIVRLYLLPKLNQPR 138
           AGGEDAVVTFEGI I TPRGRYSVELHLSF RL+G ANDFKIQYSS+VRL+LLPK NQP 
Sbjct: 203 AGGEDAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 262

Query: 139 TFVVISLDPPIREGQTLYPHIVMQFESDFVVQCELAINEDLYNTKYNDKLELSYKGLIHG 198
           TFV+ISLDPPIR+GQTLYPHIVMQFE+D+VV+ ELA++EDLYN+KY DKLELSYKGLIH 
Sbjct: 263 TFVIISLDPPIRKGQTLYPHIVMQFETDYVVESELAMSEDLYNSKYKDKLELSYKGLIHE 322

Query: 199 VFTTILCGLSGSKVTKPGTFRSFVHGYAVKSSLKAEEGYLYPLEKSFFFLPKPPTLILHE 258
           VFTTIL GLSG KVTKPG FRS   GYAVKSSLKAE+G LYPLEKSFFFLPKPPTLILHE
Sbjct: 323 VFTTILRGLSGGKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHE 382

Query: 259 EIDYLGFEQHIARGSKICYFHLLIRLKSEQEHLFCNIQRNEFNKLTAFIISKGLKLMDLR 318
           EIDY+ FE+H A GS + YF LLIRLKSEQEHLF NIQRNE++ L  FI SKGLK+M+L 
Sbjct: 383 EIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYGFISSKGLKIMNL- 441

Query: 319 SAHAQPAVALARILGN--DDAVDPHLERIKNEAGGD 352
            A AQP V +A++L N  DDAVDPHLERI+NEAGGD
Sbjct: 442 -ADAQPTVGVAKVLENDDDDAVDPHLERIRNEAGGD 476


>Medtr1g022345.1 | FACT complex subunit SSRP1 | HC |
           chr1:7068528-7074782 | 20130731
          Length = 643

 Score =  479 bits (1232), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 244/336 (72%), Positives = 270/336 (80%), Gaps = 23/336 (6%)

Query: 19  KDSFREKSFHMPNSNTQYVSDEIMPMADVGDEIMPMADVGDVIMPMADVGDEIMPMADVD 78
           KDS  E SFH+P+SNTQ+V DE  P A V                     DEIM MADV 
Sbjct: 162 KDSLMEMSFHVPSSNTQFVGDEDRPPAQV-------------------FRDEIMSMADVG 202

Query: 79  AGGEDAVVTFEGIGIFTPRGRYSVELHLSFFRLRGPANDFKIQYSSIVRLYLLPKLNQPR 138
           AGGEDAVVTFEGI I TPRGRYSVELHLSF RL+G ANDFKIQYSS+VRL+LLPK NQP 
Sbjct: 203 AGGEDAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 262

Query: 139 TFVVISLDPPIREGQTLYPHIVMQFESDFVVQCELAINEDLYNTKYNDKLELSYKGLIHG 198
           TFV+ISLDPPIR+GQTLYPHIVMQFE+D+VV+ ELA++EDLYN+KY DKLELSYKGLIH 
Sbjct: 263 TFVIISLDPPIRKGQTLYPHIVMQFETDYVVESELAMSEDLYNSKYKDKLELSYKGLIHE 322

Query: 199 VFTTILCGLSGSKVTKPGTFRSFVHGYAVKSSLKAEEGYLYPLEKSFFFLPKPPTLILHE 258
           VFTTIL GLSG KVTKPG FRS   GYAVKSSLKAE+G LYPLEKSFFFLPKPPTLILHE
Sbjct: 323 VFTTILRGLSGGKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHE 382

Query: 259 EIDYLGFEQHIARGSKICYFHLLIRLKSEQEHLFCNIQRNEFNKLTAFIISKGLKLMDLR 318
           EIDY+ FE+H A GS + YF LLIRLKSEQEHLF NIQRNE++ L  FI SKGLK+M+L 
Sbjct: 383 EIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYGFISSKGLKIMNL- 441

Query: 319 SAHAQPAVALARILGN--DDAVDPHLERIKNEAGGD 352
            A AQP V +A++L N  DDAVDPHLERI+NEAGGD
Sbjct: 442 -ADAQPTVGVAKVLENDDDDAVDPHLERIRNEAGGD 476


>Medtr5g082570.1 | FACT complex subunit SSRP1 | HC |
           chr5:35502565-35497078 | 20130731
          Length = 648

 Score =  459 bits (1182), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 232/334 (69%), Positives = 266/334 (79%), Gaps = 23/334 (6%)

Query: 19  KDSFREKSFHMPNSNTQYVSDEIMPMADVGDEIMPMADVGDVIMPMADVGDEIMPMADVD 78
           KDS  E SFH+PNSNTQ+V DE  P A V                     D+I+ +ADV 
Sbjct: 162 KDSLMEISFHIPNSNTQFVGDENCPPAQV-------------------FRDKIISVADVG 202

Query: 79  AGGEDAVVTFEGIGIFTPRGRYSVELHLSFFRLRGPANDFKIQYSSIVRLYLLPKLNQPR 138
           AGGEDAVVTF+GI I TPRGRYSVELHLSF RL+G ANDFKIQYSS+VRL+LLPK NQP 
Sbjct: 203 AGGEDAVVTFDGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPH 262

Query: 139 TFVVISLDPPIREGQTLYPHIVMQFESDFVVQCELAINEDLYNTKYNDKLELSYKGLIHG 198
           TFVVISLDPPIR+GQTLYPHIVMQFE+D+VV+ ELA++EDLYN+K+ D+LELSYKGLIH 
Sbjct: 263 TFVVISLDPPIRKGQTLYPHIVMQFETDYVVESELALSEDLYNSKFKDRLELSYKGLIHE 322

Query: 199 VFTTILCGLSGSKVTKPGTFRSFVHGYAVKSSLKAEEGYLYPLEKSFFFLPKPPTLILHE 258
           VFTT+L GLSG+KVTKPG FRS   GYAVKSSLKAE+G LYPLEKSFFFLPKPPTLI HE
Sbjct: 323 VFTTVLRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLITHE 382

Query: 259 EIDYLGFEQHIARGSKICYFHLLIRLKSEQEHLFCNIQRNEFNKLTAFIISKGLKLMDLR 318
           EIDY+ FE+H A GS + YF LLIRLKS+QEHLF NIQRNE++ L  FI SKGLK+M+L 
Sbjct: 383 EIDYVEFERHAAGGSNMHYFDLLIRLKSDQEHLFRNIQRNEYHNLYGFISSKGLKIMNL- 441

Query: 319 SAHAQPAVALARIL--GNDDAVDPHLERIKNEAG 350
              AQP   +A++L   +DDAVDPHLERI+NEAG
Sbjct: 442 -GDAQPTTGVAKVLEGDDDDAVDPHLERIRNEAG 474