Miyakogusa Predicted Gene

Lj0g3v0115009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0115009.1 Non Characterized Hit- tr|K3YJ79|K3YJ79_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si014298,33.93,1e-18,Thioredoxin-like,Thioredoxin-like fold;
Thioredoxin,Thioredoxin domain; no
description,Thioredoxin-l,CUFF.6718.1
         (224 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g029240.1 | 5-adenylylsulfate reductase-like protein | HC ...   346   8e-96
Medtr3g074620.1 | 5-adenylylsulfate reductase-like protein | HC ...   106   2e-23

>Medtr6g029240.1 | 5-adenylylsulfate reductase-like protein | HC |
           chr6:10053541-10059871 | 20130731
          Length = 294

 Score =  346 bits (888), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 175/222 (78%), Positives = 194/222 (87%), Gaps = 5/222 (2%)

Query: 1   MLFYASWCPFSQRMLSKFESLSSMFPQIEHLVLEQSSAWPSLYSKYGIHSLPAILLVNQT 60
           +LFYASWCPFS RML KFE+LSSMFP+IEHLV+EQSSA PSLYSKYGIH LP+I+LVNQT
Sbjct: 73  ILFYASWCPFSCRMLPKFEALSSMFPEIEHLVIEQSSALPSLYSKYGIHRLPSIILVNQT 132

Query: 61  SRLRYHGPKYLLSLLEFYERNTRFEASNNVIV---SSMMSDEK--LNMKSLLGLSLKEIS 115
           SRLRY G   +LSL+EFYE NTRFEAS+N+ +   SSMMS+E   LN+KSL+GLSLKE  
Sbjct: 133 SRLRYRGRNDILSLVEFYESNTRFEASSNIAIDQPSSMMSEENFSLNLKSLMGLSLKETL 192

Query: 116 SREPYLVCSILFLCLRILLFVFPKIVLRLRAFWVFCIPHLNMQIFGETSQVMGRVLQVID 175
            REPYLV S++F+CLRILLFVFPKI+ RLRAFWV CIPHLNMQIFGETSQVMGRVLQVID
Sbjct: 193 RREPYLVFSVMFICLRILLFVFPKILSRLRAFWVSCIPHLNMQIFGETSQVMGRVLQVID 252

Query: 176 VRRVWNKLRLCKTRIFHVRVRSARVWASSLASVSLGESPSAR 217
           VRR+W KL LCKTR FH R RSARVWASSLASVSLGES SAR
Sbjct: 253 VRRIWTKLGLCKTRNFHERARSARVWASSLASVSLGESSSAR 294


>Medtr3g074620.1 | 5-adenylylsulfate reductase-like protein | HC |
           chr3:33732710-33728980 | 20130731
          Length = 312

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 36/243 (14%)

Query: 1   MLFYASWCPFSQRMLSKFESLSSMFPQIEHLVLEQSSAWPSLYSKYGIHSLPAILLVNQT 60
           +LFYASWCPFS+     F  +SS+ P I H  +E+SS  PS  SKYG+H  P + ++N T
Sbjct: 84  VLFYASWCPFSRIFRPVFSVISSLHPTIPHFAIEESSVRPSTLSKYGVHGFPTLFILNST 143

Query: 61  SRLRYHGPKYLLSLLEFYERNTRFEASNNVIVSSMMSDEKLNMKSLLGLSLKE------- 113
            R+RY G + L SL+ FY         N+V    + S ++L+++ +   S  E       
Sbjct: 144 MRVRYQGSRTLGSLVGFY---------NDVTGIKIDSLDQLSLEKIGNPSANENHVDTEP 194

Query: 114 -------------ISSREPYLVCSILFLCLRILLFVFPKIVLRLRAFWVFCIPHLNMQIF 160
                        +  +E YL  +  F+ LR+L   FP +++ ++  W   I ++ +   
Sbjct: 195 ESCPFSWARSPENLLGQETYLALATAFVALRLLYLFFPTLLICIQYAWGRVIQNVRLWSL 254

Query: 161 GETSQV-MGRVLQVIDVRRVWNKLRLCKTRIFHVRVRSARVWAS-SLASVSLGESPSARL 218
            E   V + R++Q I     +     CK         +A+ WAS SLA+VS+GE  ++R 
Sbjct: 255 LEHPLVYLKRIIQSI-----YRLKEPCKRSNLQEGAMNAKAWASKSLATVSIGEESTSRA 309

Query: 219 SSQ 221
             Q
Sbjct: 310 MHQ 312