Miyakogusa Predicted Gene

Lj0g3v0114929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0114929.1 Non Characterized Hit- tr|K4CS14|K4CS14_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,50,0.0000004,
,CUFF.6711.1
         (83 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g069970.1 | hypothetical protein | HC | chr7:25790677-2579...   120   4e-28

>Medtr7g069970.1 | hypothetical protein | HC |
          chr7:25790677-25791467 | 20130731
          Length = 89

 Score =  120 bits (300), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/89 (69%), Positives = 65/89 (73%), Gaps = 6/89 (6%)

Query: 1  MWNWKGWRCFKRLSIYSIKT------SNFRFKPIGHRNGLVSLYKDMESCGEYADIQVMW 54
          M NWKGWRCFK L+IY  K+      SNFR K  GHRNGLVSLYKDMESCGEY DIQVMW
Sbjct: 1  MRNWKGWRCFKSLTIYPFKSLLCKVSSNFRLKSQGHRNGLVSLYKDMESCGEYEDIQVMW 60

Query: 55 KMIESSSTHGFKKKKANSFSLWVICFRPA 83
          KMIESSS     KKK N+ S WVIC RP 
Sbjct: 61 KMIESSSPQHACKKKRNNRSSWVICSRPT 89