Miyakogusa Predicted Gene
- Lj0g3v0114339.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0114339.1 tr|A0EFD6|A0EFD6_PARTE Chromosome undetermined
scaffold_93, whole genome shotgun sequence
OS=Paramec,34.92,0.000000000000001,no
description,Tetratricopeptide-like helical; TPR-like,NULL;
seg,NULL,CUFF.6661.1
(807 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase supe... 1086 0.0
Medtr4g074550.1 | hypothetical protein | HC | chr4:28395837-2839... 499 e-141
Medtr5g080800.1 | AAA domain protein | LC | chr5:34606228-346008... 290 6e-78
Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase super... 112 2e-24
Medtr7g006750.1 | pectinacetylesterase family protein | LC | chr... 75 2e-13
Medtr7g055900.1 | hypothetical protein | HC | chr7:18962082-1896... 65 3e-10
>Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | scaffold0189:14094-24465 |
20130731
Length = 2395
Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/800 (66%), Positives = 627/800 (78%), Gaps = 11/800 (1%)
Query: 1 MNEQDMLEPAESKSYPRFSDSKHNILCSELKQLYVSITRTRQRLWICENTEEFSIPMFDY 60
MNEQDMLEP ESKS+P F+DSKHN+LCSELKQLYV+ITRTRQRLWICENTEE+ PMFDY
Sbjct: 1567 MNEQDMLEPTESKSFPSFNDSKHNLLCSELKQLYVAITRTRQRLWICENTEEYCRPMFDY 1626
Query: 61 WKKKGLVQFKELDDSLAQAMKVASSPEEWKSRGKKLYYQNNFEMATMCFERAGDSYWEKK 120
WK K LVQFKELDDSL+QAMKVASS E+WKSRGKKLYYQNN+EMATMCF+RAGDSYWEK+
Sbjct: 1627 WKMKHLVQFKELDDSLSQAMKVASSSEDWKSRGKKLYYQNNYEMATMCFQRAGDSYWEKR 1686
Query: 121 SKAAGLRTTANRLHDFNPEGANAILREAAEIFEDIGMANSAAQCFSDLGDFERAGKLYLQ 180
SKAAGLR TANRLHD NPE ANA LREA EIFE IGMA SAAQCFSDLGD++RAGK+YL+
Sbjct: 1687 SKAAGLRATANRLHDLNPENANAFLREAGEIFESIGMAESAAQCFSDLGDYKRAGKIYLE 1746
Query: 181 TCEEPDLKRAGDCFDMAGCYEIAAQVYARGSFFSDCLTVCAKGRLFDIGFSYIQHWKQNE 240
C EPDLKRAGDCF +AGC+++AAQVYARGSFF DCL VCAKG LFDIG YIQ KQNE
Sbjct: 1747 KC-EPDLKRAGDCFYLAGCHKMAAQVYARGSFFLDCLNVCAKGGLFDIGLHYIQRRKQNE 1805
Query: 241 NADHGMVKSLDLNTIEQKFLESCAHNYLDHKDVSSVMEFVKTFHTMDSKRVFXXXXXXXX 300
+ D G S DL IEQKFL+ CA Y +KD+ S+M+FV+ FH+MD +R F
Sbjct: 1806 SVDPGWANSHDLYAIEQKFLQKCARKYFGNKDIKSMMKFVRAFHSMDLRREFLQSLSLLD 1865
Query: 301 XXXXXXXXSGNFLEAVNIAMMLGDIHREADLLGKAGRFKEAFELLLFYILANSLWSSGSK 360
SGNF+EAVNIA M+GDI READLLGK G EA+EL+LFY+LANSLW GS
Sbjct: 1866 ELLELEEESGNFMEAVNIAKMMGDILREADLLGKVGELLEAYELVLFYVLANSLWYKGSL 1925
Query: 361 GWPVKPFAQKAELLGRALSFAKEESDSFYELASMEAELLSNDHKKISEIMIHLKSSRMRE 420
WP+K F QKAELLGRAL+FAKE S+SFYELAS EAE+LSN+H I EIM LKSSR+
Sbjct: 1926 AWPMKQFTQKAELLGRALAFAKEVSNSFYELASTEAEILSNEHDNIFEIMNQLKSSRIHG 1985
Query: 421 SIRGEILCLWQLLDAHCHLNNSKYVWQDNVINDAVEGMILENHLSVETLFHCWTCWKDNI 480
SIRGEILCL +LLD+H +N SKYVWQDN+++ +VEGMIL+NH SVETLF+CWTCWKDNI
Sbjct: 1986 SIRGEILCLRKLLDSHFRMNTSKYVWQDNMLDVSVEGMILKNHFSVETLFYCWTCWKDNI 2045
Query: 481 VLILECLPSCKSPDIQQLSSYANFALNYLGVRKLTCNLNEIYSLLVPDANWVIKLGDRFQ 540
V +LE L + K + Q SY FA NYLGV+K NL ++Y LL+PDANWV KLGDR
Sbjct: 2046 VHMLESLSNFKPQEPHQHCSYVKFAFNYLGVQKQIYNLKDVYLLLIPDANWVKKLGDRLL 2105
Query: 541 KKDGRXXXXXXXXXXXXAQSYWSSELLSVGIAVLRNLEALYKFSVNSDLSDFHQFQSLLH 600
K+GR Q+YWSSELLSVG+ VLRNL+AL+KFSVN S+F Q QSLLH
Sbjct: 2106 -KNGRLVSVNVQPLVSVVQNYWSSELLSVGMDVLRNLDALFKFSVNKAFSEFCQVQSLLH 2164
Query: 601 IYEVSEFLLGSKCFSHTHGNLKTLDKFRRLPIDRSLRYIVPLDWKKSLTKDMVFLRTTEA 660
IYEVS+FLL SKCFSH HGNLKTL+ F R PI+ +VPLDWKK+LTK+M +LR TEA
Sbjct: 2165 IYEVSKFLLKSKCFSHGHGNLKTLETFYRTPIECLFHLLVPLDWKKTLTKEMFYLRETEA 2224
Query: 661 CKDLVKETIYENIRLKERLTYGQIGRVAVMIMGTASLPNELYVEIMTRFK-DNTPWNKFI 719
C++++KE IYEN + K RLTYGQIGRV VM++GTA++ +EL+V+I+ RF+ DNTPW +FI
Sbjct: 2225 CQNIMKEVIYENTKQKGRLTYGQIGRVVVMVLGTANVKDELFVQILKRFEDDNTPWKEFI 2284
Query: 720 QQWSPAQEISQRNDSSAELNRALSLYEALQYTYNVNWIKETDYLSPSCFMYLVERLLLLA 779
Q +++ N+ + E++R L++AL YTY VNW+ E DY+SPSCFMYL+ERLLL
Sbjct: 2285 Q----GVQLNSANEVTFEVDRTHRLFKALDYTYRVNWMNEVDYMSPSCFMYLIERLLLYV 2340
Query: 780 S----CRKGLMFATKSSFIE 795
S RKG ++ TKSSF E
Sbjct: 2341 SHLNGYRKGFIYVTKSSFTE 2360
>Medtr4g074550.1 | hypothetical protein | HC |
chr4:28395837-28398506 | 20130731
Length = 371
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 249/371 (67%), Positives = 285/371 (76%), Gaps = 2/371 (0%)
Query: 104 MATMCFERAGDSYWEKKSKAAGLRTTANRLHDFNPEGANAILREAAEIFEDIGMANSAAQ 163
MATMCFERAGDSYW KKSKAA LR TA RLHD N E ANAILREAAEIFE +GM +SAAQ
Sbjct: 1 MATMCFERAGDSYWGKKSKAASLRATAIRLHDLNLEDANAILREAAEIFEGLGMVDSAAQ 60
Query: 164 CFSDLGDFERAGKLYLQTCEEPDLKRAGDCFDMAGCYEIAAQVYARGSFFSDCLTVCAKG 223
CF+DLGD+ERAGK+YL+ CEEPDLKRAGDCF +A CY +AAQVYARGSFFSDCL VCAKG
Sbjct: 61 CFTDLGDYERAGKIYLEKCEEPDLKRAGDCFFLARCYHMAAQVYARGSFFSDCLNVCAKG 120
Query: 224 RLFDIGFSYIQHWKQNENADHGMVKSLDLNTIEQKFLESCAHNYLDHKDVSSVMEFVKTF 283
L D G YIQ WKQNE AD G S DL IEQKF+E+CA NY D D S+M+FV+ F
Sbjct: 121 GLLDTGSHYIQCWKQNERADPGWANSHDLYAIEQKFMENCALNYFDKNDYRSMMKFVRAF 180
Query: 284 HTMDSKRVFXXXXXXXXXXXXXXXXSGNFLE-AVNIAMMLGDIHREADLLGKAGRFKEAF 342
H++D KR F SGNF+E AVNIA +GDI READLLGKAG F +A+
Sbjct: 181 HSIDLKRGFLQSLNLPDELLELEEESGNFMEAAVNIAKTMGDILREADLLGKAGEFLDAY 240
Query: 343 ELLLFYILANSLWSSGSKGWPVKPFAQKAELLGRALSFAKEESDSFYELASMEAELLSND 402
EL+ FY+ A SLWS GSK WP+K F QKA LLG+AL+FAKE S SFYELAS + E LSN
Sbjct: 241 ELVFFYVFAKSLWSGGSKAWPLKQFTQKAGLLGKALTFAKEVSSSFYELASTKVE-LSNK 299
Query: 403 HKKISEIMIHLKSSRMRESIRGEILCLWQLLDAHCHLNNSKYVWQDNVINDAVEGMILEN 462
H I EI+ LKSSR+ SIRGEILCLW+LLD+H LN+SKYVWQD++ + +VEGMI++N
Sbjct: 300 HDNIFEIVNQLKSSRIHSSIRGEILCLWELLDSHFRLNSSKYVWQDSMFDVSVEGMIMKN 359
Query: 463 HLSVETLFHCW 473
LSVETLF CW
Sbjct: 360 QLSVETLFCCW 370
>Medtr5g080800.1 | AAA domain protein | LC | chr5:34606228-34600879
| 20130731
Length = 1281
Score = 290 bits (741), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 148/265 (55%), Positives = 175/265 (66%), Gaps = 26/265 (9%)
Query: 181 TCEEPDLKRAGDCFDMAGCYEIAAQVYARGSFFSDCLTVCAKGRLFDIGFSYIQHWKQNE 240
+ +PDLKRA DCF +A C+E+AAQVYARGSFFSDCL VCAKG LFDIG YI+ WKQNE
Sbjct: 673 SIHQPDLKRARDCFYLARCHEMAAQVYARGSFFSDCLNVCAKGGLFDIGLHYIECWKQNE 732
Query: 241 NADHGMVKSLDLNTIEQKFLESCAHNYLDHKDVSSVMEFVKTFHTMDSKRVFXXXXXXXX 300
+AD G S DLN IEQKF+E+CAHNY + KD+ S+M+FV+ FH+M+ KR F
Sbjct: 733 SADPGWANSHDLNAIEQKFMENCAHNYFEKKDIKSMMKFVRAFHSMNLKRRFLLSLSLLD 792
Query: 301 XXXXXXXXSGNFLEAVNIAMMLGDIHREADLLGKAGRFKEAFELLLFYILANSLWSSGSK 360
SGNF+ E +EL+ FY+LA SLWS GSK
Sbjct: 793 ELLELEEESGNFM--------------------------EVYELMFFYVLAKSLWSGGSK 826
Query: 361 GWPVKPFAQKAELLGRALSFAKEESDSFYELASMEAELLSNDHKKISEIMIHLKSSRMRE 420
WP K F +K +LLGRAL+FAK S SFYELAS E E LSN H I EIM LKSSR+
Sbjct: 827 AWPFKQFTEKEDLLGRALTFAKVVSSSFYELASTEVERLSNKHDNIFEIMNQLKSSRIYR 886
Query: 421 SIRGEILCLWQLLDAHCHLNNSKYV 445
SIRGEILCLW+LLD+H LN+SK V
Sbjct: 887 SIRGEILCLWKLLDSHFRLNSSKVV 911
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 78/114 (68%), Gaps = 3/114 (2%)
Query: 685 GRVAVMIMGTASLPNELYVEIMTRFKDNTPWNKFIQ--QWSPAQEISQRNDSSAELNRAL 742
+V VMI+GTA++ ++ +V++MTRF+DN FI + A I + E++
Sbjct: 908 SKVVVMILGTANVKDDPFVQVMTRFEDNKHGKDFIDSLRLYSAHGILPHKKTEFEMHPTC 967
Query: 743 SLYEALQYTYNVNWIKETDYLSPSCFMYLVERLLLLASCRKG-LMFATKSSFIE 795
LY+AL YT++VN IKE DY+SPSCFMYL E+LLLL SC +G L++ATKSSF E
Sbjct: 968 KLYKALCYTWSVNRIKEVDYISPSCFMYLFEQLLLLTSCSRGRLIYATKSSFTE 1021
>Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:12235889-12229184 |
20130731
Length = 1644
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
Query: 1 MNEQDMLEPAESKSYPRFSDSKHNILCSELKQLYVSITRTRQRLWICENTEEFSIPMFDY 60
M E+++L+P S++ F DSKHN+LCSELKQLYV++TR R+RLWICE+ EEFS PMF Y
Sbjct: 1562 MKEKNLLDP-RSRNCQSFVDSKHNVLCSELKQLYVALTRARKRLWICEDVEEFSKPMFSY 1620
Query: 61 WKKKGLVQFKELDDSLAQAMKV 82
W+KK LVQFK L+ SL + MKV
Sbjct: 1621 WEKKNLVQFKILNSSLVETMKV 1642
>Medtr7g006750.1 | pectinacetylesterase family protein | LC |
chr7:1220390-1217478 | 20130731
Length = 816
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 39/49 (79%)
Query: 747 ALQYTYNVNWIKETDYLSPSCFMYLVERLLLLASCRKGLMFATKSSFIE 795
A YT +VNWIKE DY+SP CFMYLVE LLLL SC KG + +TKSSFIE
Sbjct: 309 AASYTCSVNWIKEVDYISPDCFMYLVEWLLLLTSCWKGFIHSTKSSFIE 357
>Medtr7g055900.1 | hypothetical protein | HC |
chr7:18962082-18965703 | 20130731
Length = 437
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 8/155 (5%)
Query: 645 KKSLTKDMVFLRTTEACK-DLVKETIYE-NIRLKERLTYGQIGRVAVMIMGTASLPNELY 702
+ SL+K++V R + + D+++E + K+ L+ ++GRV V ++G + + +
Sbjct: 25 QNSLSKELVLKRDKDELELDVIEEIMAACTYNKKKHLSNEEVGRVMVELLGKKKIDDSVL 84
Query: 703 VEIMTRFKDNTPWNKFIQQWSPAQEISQRNDSSAELNRALSLYEALQYTYNVNWIKETDY 762
E+ D W F+ + + EL+ +LY+ALQ++++V+W K
Sbjct: 85 EELRKMLNDRPSWVNFVNCMLGFDSVGT---FAKELSMFWTLYKALQHSHSVDW-KHNGV 140
Query: 763 LSPSCFMYLVERLLLLAS--CRKGLMFATKSSFIE 795
++P+C MYL++RL L AS + ++ATKS+ +E
Sbjct: 141 ITPTCAMYLIDRLALQASLWSQGDYLYATKSTVVE 175