Miyakogusa Predicted Gene
- Lj0g3v0113949.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0113949.1 tr|D7LQ58|D7LQ58_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,46.79,0.000000000000001,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
N,NODE_104170_length_495_cov_7.468687.path1.1
(109 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 145 9e-36
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 7e-15
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 73 6e-14
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 4e-13
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 4e-13
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 2e-12
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 2e-12
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 2e-12
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 5e-12
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 66 7e-12
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 66 8e-12
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 65 1e-11
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 1e-11
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 65 1e-11
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-11
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 3e-11
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 3e-11
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 64 3e-11
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 64 3e-11
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 64 4e-11
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 4e-11
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 63 6e-11
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 1e-10
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 61 2e-10
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 2e-10
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 61 2e-10
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 61 2e-10
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 61 2e-10
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 61 2e-10
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 61 2e-10
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 61 3e-10
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 3e-10
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 3e-10
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 60 3e-10
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 60 4e-10
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 60 4e-10
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 60 4e-10
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 60 7e-10
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 59 7e-10
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 59 1e-09
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 59 1e-09
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 59 1e-09
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 1e-09
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 1e-09
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 1e-09
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 58 2e-09
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 58 2e-09
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 58 2e-09
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 58 2e-09
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 58 2e-09
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 2e-09
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 3e-09
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 57 3e-09
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 3e-09
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 3e-09
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 3e-09
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 57 3e-09
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 57 3e-09
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 57 3e-09
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 57 4e-09
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 4e-09
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 5e-09
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 5e-09
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 57 5e-09
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 57 5e-09
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 57 5e-09
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 7e-09
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 7e-09
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 56 7e-09
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 56 8e-09
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 9e-09
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 56 1e-08
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 55 1e-08
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 55 1e-08
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 55 1e-08
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 55 1e-08
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 55 1e-08
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 55 1e-08
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 1e-08
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 1e-08
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 1e-08
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 1e-08
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 1e-08
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 55 1e-08
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 55 2e-08
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 2e-08
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 2e-08
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 55 2e-08
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 2e-08
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 2e-08
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 55 2e-08
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 55 2e-08
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 54 2e-08
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 54 2e-08
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 54 2e-08
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 54 2e-08
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 54 2e-08
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 54 3e-08
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 54 3e-08
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 54 3e-08
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 54 3e-08
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 54 3e-08
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 54 3e-08
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 54 3e-08
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 3e-08
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 3e-08
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 54 3e-08
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 54 4e-08
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 54 4e-08
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 54 4e-08
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 54 4e-08
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 54 4e-08
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 54 4e-08
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 54 5e-08
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 5e-08
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 5e-08
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 5e-08
Medtr4g113830.1 | organelle transcript processing protein, putat... 53 6e-08
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 53 6e-08
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 6e-08
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 53 7e-08
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 53 8e-08
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-07
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 52 1e-07
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 52 1e-07
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-07
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-07
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 52 1e-07
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-07
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 52 1e-07
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-07
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 52 2e-07
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 2e-07
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 2e-07
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 2e-07
Medtr5g006420.1 | organelle transcript processing protein, putat... 52 2e-07
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 52 2e-07
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 51 2e-07
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 51 2e-07
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 2e-07
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 51 2e-07
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 51 2e-07
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 2e-07
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 51 2e-07
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 51 2e-07
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 51 2e-07
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 3e-07
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 51 3e-07
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 51 3e-07
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 51 3e-07
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 3e-07
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 3e-07
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 51 3e-07
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 3e-07
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 50 3e-07
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 50 3e-07
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 3e-07
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 50 3e-07
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 4e-07
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 4e-07
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 50 4e-07
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 50 4e-07
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 50 4e-07
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 5e-07
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 50 5e-07
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 50 5e-07
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 6e-07
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 6e-07
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 50 6e-07
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 50 6e-07
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 50 6e-07
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 50 7e-07
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 50 7e-07
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 8e-07
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 9e-07
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 9e-07
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 49 1e-06
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 49 1e-06
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 1e-06
Medtr5g025200.1 | PPR repeat protein | HC | chr5:10223562-102249... 49 1e-06
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 49 1e-06
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 1e-06
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 49 1e-06
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 49 1e-06
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 49 2e-06
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 48 2e-06
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 48 2e-06
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 48 2e-06
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 48 2e-06
Medtr1g059720.1 | organelle transcript processing protein, putat... 48 2e-06
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 48 2e-06
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 48 2e-06
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 48 2e-06
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 48 2e-06
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 48 2e-06
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 48 2e-06
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 48 2e-06
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 48 3e-06
Medtr3g052720.1 | organelle transcript processing protein, putat... 47 3e-06
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 47 3e-06
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 47 3e-06
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 47 3e-06
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 47 4e-06
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 47 4e-06
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 47 4e-06
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 47 4e-06
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 46 8e-06
>Medtr5g038580.1 | PPR containing plant-like protein | HC |
chr5:16954387-16952525 | 20130731
Length = 620
Score = 145 bits (365), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/109 (69%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Query: 2 PNSVTIATLLTARDV-GPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
PNSVTI +LL+ARDV HV QVHC A KLGV DVYV+TSLVTAY + GVLVS+ KVF
Sbjct: 135 PNSVTIVSLLSARDVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVF 194
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+ L V+NVV+YNAFMSGLLQNG R+VFDVFKDM + E +PN VTLVS
Sbjct: 195 ENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVS 243
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN VT+ ++++A + I + QVH + KL V V TSLV Y + G SA V
Sbjct: 236 PNKVTLVSVVSACATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDV 295
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
F RN++++N+ ++G++ N ++F+ M+
Sbjct: 296 FSRSEKRNLITWNSMIAGMMMNSESERAVELFERMV 331
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVR--NVVSYNAFMSGLLQN 81
+H A ++ V D ++AT+LV Y++ G + A VFD+ V+ + +NA + G N
Sbjct: 396 IHGYALRICVDKDDFLATALVDTYMKCGCVSFARFVFDQFDVKPDDPAFWNAMIGGYGTN 455
Query: 82 GAPRLVFDVFKDMMRSFENEPNSVTLVS 109
G F+VF +M+ +PNS T VS
Sbjct: 456 GDYESAFEVFYEMLDEMV-QPNSATFVS 482
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 75.9 bits (185), Expect = 7e-15, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 7/112 (6%)
Query: 2 PNSVTIATLLTARDVGPI----HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAG 57
PN+VTI +L+ A G I H ++HC + + G+ DVYV ++L+ Y G + +
Sbjct: 233 PNAVTIPSLIPA--CGNISALTHGKEIHCFSLRKGIFDDVYVGSALIDMYANCGRIRLSQ 290
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FDE+P RN+VS+N+ MSG +G + ++F M++S + +P+S+T S
Sbjct: 291 NCFDEMPFRNLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQ-KPDSITFTS 341
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH KLG+ SD YV ++L+ Y R G +VFDE+ + S NAF++GL +NG
Sbjct: 120 QVHGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNG 179
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
DVFK ++ E E N VT S
Sbjct: 180 LVDTALDVFKK-FKAGELELNVVTWTS 205
>Medtr7g082550.1 | PPR containing plant-like protein | HC |
chr7:31648795-31646693 | 20130731
Length = 487
Score = 72.8 bits (177), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q HC A ++G +++VYV +SL++ Y R G+L A +VFDE+ VRNVVS+ A ++G Q
Sbjct: 129 QYHCLAIRIGFIANVYVGSSLISLYSRCGLLGDAYRVFDEMSVRNVVSWTAIIAGFAQEW 188
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+ ++F+ MR E +PN T S
Sbjct: 189 RVDMCLELFR-RMRGLELKPNYFTYTS 214
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 43/60 (71%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+VHCC K+G DV+VA SLV Y R+GVL A KVF ++PV++V S+NA +SG QNG
Sbjct: 142 KVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNG 201
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 3 NSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
+++T+A++L A+ I+ +H K G+ SDV+V+ +L+ Y +FG L A VF
Sbjct: 221 DTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVF 280
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
D++ VR++VS+N+ ++ QN P FK M
Sbjct: 281 DQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQ 315
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%)
Query: 35 SDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
DV + +LV Y + G + A VFD+LP ++ +S+N ++G QNG D + M
Sbjct: 357 KDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMM 416
Query: 95 MRSFENEPNSVTLVS 109
+ PN T VS
Sbjct: 417 EECRDTIPNQGTWVS 431
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 70.1 bits (170), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELP--VRNVVSYNAFMSGLLQN 81
VHCCA KLG++ +V V +LV Y +FG + SA ++F E+P +++VS+N+ ++ QN
Sbjct: 169 VHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQN 228
Query: 82 GAPRLVFDVFKDMMRSFENEPNSVTLVS 109
G P F+ F DMMR P+ T+VS
Sbjct: 229 GMPNEAFNCF-DMMRVNGFFPDDATMVS 255
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH A K VLSDV+V +L+ Y +FG + SA KVFD++P RN+VS+N+ M L+NG
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277
Query: 84 PRLVFDVFKDMMRSFEN-EPNSVTLVS 109
+ +FK ++ E P+ T+V+
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVT 304
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 3 NSVTIATLLTA--RDVGPIHVPQVHCCASKLGVL-SDVYVATSLVTAYLRFGVLVSAGKV 59
N VT+ +L ++ + + ++H A + G + SD VA + V Y + G L A V
Sbjct: 399 NEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGV 458
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F + + V S+NA + G +QNG PR D++ +MR EP+ T+ S
Sbjct: 459 FCGMESKMVSSWNALIGGHVQNGFPRKALDLYL-LMRGSGLEPDLFTIAS 507
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 2 PNSVTIATLLTA--RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ TIA+LL+A R ++H + G D ++ SLV+ Y++ G ++ A
Sbjct: 500 PDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLF 559
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
FD + +N+V +N ++G QN P D+F M+ S + P+ ++++
Sbjct: 560 FDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSS-KIWPDEISII 607
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 12/113 (10%)
Query: 3 NSVTIATLLTARDVGPIHVPQ-------VHCCASKLGVLSDVYVATSLVTAYLRFGVLVS 55
NSVT+ L++ I VP+ +H C K G +D+ V S +T Y++ G +
Sbjct: 160 NSVTMLGLVSG-----ILVPEKLRLGFCLHGCCFKFGFENDLSVGNSFLTMYVKCGEVEY 214
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
KVFDE+ V++++++NA +SG QNG R V +++++M + P+ VTL+
Sbjct: 215 GRKVFDEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVGGVNPDPVTLL 267
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 2 PNSVTIATLLTARDVG--PIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN+ T LL + + P Q+H K G D Y +SL+ Y + + A KV
Sbjct: 57 PNTFTFPVLLKSCALLSLPFTGSQLHSHILKTGSQPDPYTHSSLINMYSKTSLPCLARKV 116
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
FDE PV +SYNA +SG N +F+ M+ NSVT++
Sbjct: 117 FDESPVNLTISYNAMISGYTNNMMIVEAIKLFRRMLCENRFFVNSVTML 165
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 67.8 bits (164), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 2 PNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
PN+ T ++LL + PI +HC K G+ SD YVAT LV Y R G +SA K+FD
Sbjct: 120 PNAFTFSSLLNGSTIQPIK--SIHCHVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFD 177
Query: 62 ELPVRNVVSYNAFMSGLLQNGA---PRLVFD 89
++P ++++S+ + ++G RL+FD
Sbjct: 178 KMPEKSLISFTTMLMCYAKHGKLLEARLLFD 208
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 66.6 bits (161), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 3 NSVTIATLLTARDVGPI--HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
+ I LL A D P +V +H + K G DV++ T++V AY + GV+ A KVF
Sbjct: 50 DPTVIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVF 109
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
D +P RNVV++NA + G L+NG + F++M
Sbjct: 110 DLMPERNVVTWNAMIGGYLRNGDAKSALLAFEEM 143
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 65.9 bits (159), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 3 NSVTIATLLTA---RDVGPIHVPQVHCCASK----LGVLSDVYVATSLVTAYLRFGVLVS 55
++ T+A+LL D H ++HC K L + SDV++ +SL+ Y R LV
Sbjct: 231 DAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVL 290
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+ +VFD++ RN+ + A ++G +QNGAP +F++M R PN V+LVS
Sbjct: 291 SRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVS 344
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 1 MPNSVTIATLLTARDVGPIHV----PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSA 56
+P+ T+AT+ ++ G I +H + ++G +SD+ V S+++ Y+R A
Sbjct: 123 LPDDYTLATI--SKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDA 180
Query: 57 GKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSF 98
KVFDE+P RNV S+N +SG G L + ++ D+ F
Sbjct: 181 MKVFDEMPQRNVGSFNVIISGCAALG--NLDYSLYADLWNFF 220
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 65.9 bits (159), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 48/71 (67%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H K G L+DV+V SL++ ++ FG+ +A KVFDE+ VR+VVS+N+ + G L+NG
Sbjct: 151 IHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGE 210
Query: 84 PRLVFDVFKDM 94
+ ++F+ M
Sbjct: 211 VEMALNLFRKM 221
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 PNSVTIATLLTA-RDVGPI-HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ +TIA++L+A +G I H VH K + DV + T+LV Y + G + A ++
Sbjct: 263 PDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEI 322
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
F+++P ++ ++ A +S +G + FD F +M ++ +PN VT V
Sbjct: 323 FNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKA-GVKPNHVTFV 370
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 17/125 (13%)
Query: 2 PNSVTIATLLTARDVGPIH--VPQVHCCASKLGVLSDVYVATSLVTAYLRF-------GV 52
PN +LL A + H +H C +LG+ SD+Y+A +L+ Y +F V
Sbjct: 108 PNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDV 167
Query: 53 LVSAG--------KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNS 104
G KVFD +PVR+VVS+N ++G QNG D+ ++M ++ + +P+S
Sbjct: 168 FPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDS 227
Query: 105 VTLVS 109
TL S
Sbjct: 228 FTLSS 232
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H A K G +SD++ + SLV Y + G + A + F E+P R +VS++A + GL Q+G
Sbjct: 509 QLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHG 568
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+ +F M++ + PN +TLVS
Sbjct: 569 HGKEALIMFNQMLKDCVS-PNHITLVS 594
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H A K G +SD++ + SLV Y + G + A + F E+P R +VS++A + GL Q+G
Sbjct: 509 QLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHG 568
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+ +F M++ + PN +TLVS
Sbjct: 569 HGKEALIMFNQMLKDCVS-PNHITLVS 594
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 19 IHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGL 78
+ V +VH A++ GV+SDV+V +L+ AY + + A +VFD+L VR+VVS+ + S
Sbjct: 95 LRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCY 154
Query: 79 LQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
++ G PR DVF++M S +PN +T+ S
Sbjct: 155 VKCGFPRKGMDVFREMGWS-GVKPNPMTVSS 184
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 1 MPNSVTIATLLTA-RDVGPI-HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+P+ T ++ A D G + V ++H K G+ DV+V ++LVT YL+F ++V A +
Sbjct: 130 IPDKFTFPCVIRACGDAGDVFEVKKIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHE 189
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS 97
VF+ELPVR+VV +N+ ++G Q G +F+ M+ +
Sbjct: 190 VFEELPVRDVVLWNSMVNGYAQIGCFEEALGMFRRMVEN 228
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 1 MPNSVTIATLLTAR-DVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
MPNS T ++LTA + + + + VH A K G +DV+V T++V Y +FG + A +
Sbjct: 234 MPNSYTFPSILTACCALKEMQIGKGVHGLAIKCGA-TDVFVETAIVDLYAKFGCMSEAYR 292
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F ++ V+NVVS+ A +SG +Q +FKD MR +E N+ T+ S
Sbjct: 293 QFSQMQVQNVVSWTAIISGFVQQDDTTFALKLFKD-MRQIGHEINAYTVTS 342
Score = 52.4 bits (124), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 1 MPNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+P+ +T+ ++LTA D+ + ++H +LG+ ++ V +LV Y + G L A K
Sbjct: 534 VPDHITLISILTACADLRLLRTGREIHGSTFRLGLGTNTVVGGALVNMYSKCGSLSLARK 593
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFE 99
VFD LP ++ + ++ +SG QNG F +F DM+R+ E
Sbjct: 594 VFDILPHKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDE 634
Score = 52.4 bits (124), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH K G++++ V SL T Y + G L + +VF + V++ VS+ + +SG +++G
Sbjct: 457 QVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHG 516
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
P +FK+M+ E P+ +TL+S
Sbjct: 517 YPDQALRLFKEMLYQ-EVVPDHITLIS 542
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 8 ATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRN 67
A+LL D+G Q+H KLG+ +DV V +SL+T Y + G + K FD++ +
Sbjct: 648 ASLLCQSDIGT----QLHAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRKAFDDVEKPD 703
Query: 68 VVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
++ + + + Q+G + ++M+S EP++VT V
Sbjct: 704 LIGWTSLILSYAQHGKGADALAAY-ELMKSEGVEPDAVTFV 743
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 63.9 bits (154), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH C K G ++VYVAT L+ Y+ + S KVFD++P NVV++ ++G + N
Sbjct: 129 VHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVINDQ 188
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
PR +VFK+M R + E N VT+V+
Sbjct: 189 PREALEVFKEMGR-WGVEANEVTMVN 213
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+HC K+G + V+V T L+ Y +G LV A +VF E+P RN V++N F+SGL++ G
Sbjct: 135 HLHCIVCKMGFENHVFVQTGLLHMYSNWGFLVDAAQVFGEMPDRNTVTWNVFISGLIKWG 194
Query: 83 APRLVFDVFKDM 94
VF M
Sbjct: 195 QLEFARSVFDRM 206
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 2 PNSVTIATLLTARDVGPIHVPQVHCCASKLGVLS-------DVYVATSLVTAYLRFGVLV 54
PN VT+ T+ A H+ V C S G + D+ + +L+ Y + G +
Sbjct: 245 PNEVTLLTVFPA----IAHLGNVKMCESVHGYVEKRGFNAVDIRIVNALIDLYAKCGCIE 300
Query: 55 SAGKVFDELP--VRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
SA +F E+P RN VS+N+ MSG G R D F+ M ++ PN V +S
Sbjct: 301 SASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEKMEKA-GVRPNHVAFLS 356
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 63.5 bits (153), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN VT+ +L+A +G + + Q+ A+ G+ D++VAT+L+ Y + G L SA +V
Sbjct: 318 PNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRV 377
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM-RSFENEPNSVTLVS 109
F+++P +N S+NA +S L +G + +F+ M PN +T VS
Sbjct: 378 FNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVS 428
Score = 58.9 bits (141), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 2 PNSVTIA-TLLTARDVGPIHVPQV-HCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN+ T L ++ I + ++ HC KLG+ +D + S+VT Y R G A KV
Sbjct: 115 PNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKV 174
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FDE+ +++VS+N+ +SG + G R +VF + EP+ ++LVS
Sbjct: 175 FDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVS 224
Score = 52.8 bits (125), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 32 GVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVF 91
G+ + Y+ ++L++ Y + G LVS+ ++FD +P R+ +++NA +S QNG +F
Sbjct: 249 GMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLF 308
Query: 92 KDMMRSFEN--EPNSVTLVS 109
M EN +PN VTL +
Sbjct: 309 HSMK---ENGVDPNKVTLTA 325
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 63.5 bits (153), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVP-QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ +T T + A D+ + + QV A+K G+ +V VA S+VT Y R G++ A
Sbjct: 509 PDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNT 568
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD + ++++S+NA ++ QNG V D F+DM+++ E +PN ++ VS
Sbjct: 569 FDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKT-ECKPNHISYVS 617
>Medtr3g088835.1 | PPR containing plant-like protein | HC |
chr3:40655233-40657665 | 20130731
Length = 629
Score = 62.8 bits (151), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTARDVG-PIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P T++ LL++ + P+ V Q+H K G SD V SLV Y +FG + +A +
Sbjct: 345 PTKYTVSCLLSSVSIFLPVEVGNQIHALVHKFGFESDSVVTNSLVDMYAKFGFIDNALNI 404
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F+E+ +++VS+N M GL NG + D+F+++ R P+ +TL +
Sbjct: 405 FNEIKTKDLVSWNTIMMGLSYNGKVCVTMDLFEELRRE-GMPPDRITLAA 453
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 11/115 (9%)
Query: 1 MPNSVTIATLLTA------RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLV 54
+PN+ T A++L A D+G Q+H C K G+ S+V+V+ +++ Y + G +
Sbjct: 335 VPNNFTFASVLQACASSVSLDLGK----QIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIE 390
Query: 55 SAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
++ K+F+ELP RN V++N + G +Q G ++F M+ + +P VT S
Sbjct: 391 NSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEH-DMQPTEVTYSS 444
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 PNSVTIATLLTARDVGPIHVP--QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P VT +++L A P Q+H K D VA SL+ Y + G + A
Sbjct: 437 PTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLT 496
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
FD++ R+ VS+NA + G +G ++F DMM+ + +PN +T V
Sbjct: 497 FDKMNKRDEVSWNAMICGYSMHGMSMEALNLF-DMMQHTDCKPNKLTFV 544
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 1 MPNSVTIATLLTARDVGPIHVPQ----VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSA 56
+P+S T LL A I PQ VHC + G SDV+V +L+ Y FG +V+A
Sbjct: 113 LPDSFTFPFLLKACANVLISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNA 172
Query: 57 GKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
KVFDE VR+ VS+N ++G + G F VF + MR P+ T V+
Sbjct: 173 YKVFDESFVRDCVSFNTMINGFARKGDVSGCFRVFGE-MRGVCVRPDEYTFVA 224
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H A G SD++VA++L+ Y + G L A K+FDE+P RNVVS+ + +SG +QN
Sbjct: 107 QIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNE 166
Query: 83 APRLVFDVFKDMM 95
R +FK+ +
Sbjct: 167 RAREAVFLFKEFL 179
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH A K G + V +L+ AY + G + + KVFD + +V S+N+ ++ QNG
Sbjct: 220 VHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGL 279
Query: 84 PRLVFDVFKDMMRSFENEPNSVTL 107
F +F DM++ E N+VTL
Sbjct: 280 SVEAFSLFSDMVKRGEVRYNAVTL 303
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 3 NSVTI-ATLLTARDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
N+VT+ A LL G + + + +H K+ + ++ V TS+V Y + G + A K F
Sbjct: 299 NAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAF 358
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
D L +NV S+ ++G +G + VF +M+R +PN +T VS
Sbjct: 359 DRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRC-GIKPNYITFVS 406
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H A G SD++VA++L+ Y + G L A K+FDE+P RNVVS+ + +SG +QN
Sbjct: 107 QIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNE 166
Query: 83 APRLVFDVFKDMM 95
R +FK+ +
Sbjct: 167 RAREAVFLFKEFL 179
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH A K G + V +L+ AY + G + + KVFD + +V S+N+ ++ QNG
Sbjct: 220 VHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGL 279
Query: 84 PRLVFDVFKDMMRSFENEPNSVTL 107
F +F DM++ E N+VTL
Sbjct: 280 SVEAFSLFSDMVKRGEVRYNAVTL 303
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 3 NSVTI-ATLLTARDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
N+VT+ A LL G + + + +H K+ + ++ V TS+V Y + G + A K F
Sbjct: 299 NAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAF 358
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
D L +NV S+ ++G +G + VF +M+R +PN +T VS
Sbjct: 359 DRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRC-GIKPNYITFVS 406
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 3 NSVTIATLLT-ARDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
N +T +TLL A G + + Q+H K G +S V+V + LV Y + G++ A KVF
Sbjct: 151 NRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVF 210
Query: 61 DELPVRNVVSYNAFMSGLLQNG----APRLVFDV 90
DELP +NVV YN + GL++ G + RL F++
Sbjct: 211 DELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEM 244
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH + +++VA++LV Y + + SA VF ++ +NVVS+ A + G QNG
Sbjct: 305 QVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNG 364
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
F DM + + EP+ TL S
Sbjct: 365 YSEEAVKTFSDMQK-YGIEPDDFTLGS 390
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 3 NSVTIATLLT-ARDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
N +T +TLL A G + + Q+H K G +S V+V + LV Y + G++ A KVF
Sbjct: 151 NRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVF 210
Query: 61 DELPVRNVVSYNAFMSGLLQNG----APRLVFDV 90
DELP +NVV YN + GL++ G + RL F++
Sbjct: 211 DELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEM 244
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH + +++VA++LV Y + + SA VF ++ +NVVS+ A + G QNG
Sbjct: 305 QVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNG 364
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
F DM + + EP+ TL S
Sbjct: 365 YSEEAVKTFSDMQK-YGIEPDDFTLGS 390
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 3 NSVTIATLLT-ARDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
N +T +TLL A G + + Q+H K G +S V+V + LV Y + G++ A KVF
Sbjct: 142 NRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVF 201
Query: 61 DELPVRNVVSYNAFMSGLLQNG----APRLVFDV 90
DELP +NVV YN + GL++ G + RL F++
Sbjct: 202 DELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEM 235
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH + +++VA++LV Y + + SA VF ++ +NVVS+ A + G QNG
Sbjct: 296 QVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNG 355
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
F DM + + EP+ TL S
Sbjct: 356 YSEEAVKTFSDMQK-YGIEPDDFTLGS 381
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 3 NSVTIATLLT-ARDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
N +T +TLL A G + + Q+H K G +S V+V + LV Y + G++ A KVF
Sbjct: 142 NRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVF 201
Query: 61 DELPVRNVVSYNAFMSGLLQNG----APRLVFDV 90
DELP +NVV YN + GL++ G + RL F++
Sbjct: 202 DELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEM 235
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH + +++VA++LV Y + + SA VF ++ +NVVS+ A + G QNG
Sbjct: 296 QVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNG 355
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
F DM + + EP+ TL S
Sbjct: 356 YSEEAVKTFSDMQK-YGIEPDDFTLGS 381
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 60.8 bits (146), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 2 PNSVTIATLLTARDVGP--IHVP--------QVHCCASKLGVLSDVYVATSLVTAYLRFG 51
PN T + L+ A P H P Q+ K GV ++V TSL+ Y++ G
Sbjct: 46 PNEFTFSLLIKAYLSSPSFTHCPSTAALQARQIQTQCLKRGVNQFIHVHTSLIDLYMKLG 105
Query: 52 VLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFEN-EPNSVTLVS 109
A +FD++ R+VVS+N + G QNG +F DM+R EN +PN T+VS
Sbjct: 106 FTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLR--ENFKPNQTTIVS 162
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 60.5 bits (145), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+H K G DV+ +L+ Y+R G LVSA K+FDE+P +N+VS++ +SG QN
Sbjct: 44 HLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNR 103
Query: 83 APRLVFDVFKDMMRS 97
P +FK ++ S
Sbjct: 104 MPDEACSLFKGVISS 118
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+VH CA + + SDV V ++LV Y + G + A + F+ +PVRN+ S+N+ +SG ++G
Sbjct: 665 EVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHG 724
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLV 108
+ +F M+ P+ VT V
Sbjct: 725 HGQKALKIFT-RMKQHGQSPDHVTFV 749
Score = 57.8 bits (138), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 2 PNSVTIATLLTAR----DVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAG 57
PN T+ +L+TA D G + + Q+ K G L D+YV ++LV + R+G++ A
Sbjct: 230 PNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAK 289
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFE-NEPNSVTLVS 109
+F ++ RN V+ N M GL + VFK+M E N + V L+S
Sbjct: 290 MIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLS 342
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 60.5 bits (145), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
Query: 2 PNSVTIATLLTARDVGPIHVPQ----VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAG 57
P+S T +++TA + + V + +H A + + ++V+VAT+LV Y + G + +A
Sbjct: 436 PDSFTFVSVITA--LADLSVTRQAKWIHGLAIRTNMDTNVFVATALVDMYAKCGAIETAR 493
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
++FD + R+V+++NA + G +G + D+F DM +PN +T +S
Sbjct: 494 ELFDMMQERHVITWNAMIDGYGTHGLGKAALDLFDDMQNEASLKPNDITFLS 545
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 3 NSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
+S+T+ ++L A DV + + + VH A +LG S V V+T+L+ Y + G + + VF
Sbjct: 235 DSITLVSVLPAVADVKGLRIGRSVHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVF 294
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
+ +NVVS+N + GL QNG F F M + EP +V+++
Sbjct: 295 QRMSSKNVVSWNTVIDGLAQNGESEEAFATFLKMFEE-KVEPTNVSMM 341
Score = 45.8 bits (107), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+VH K G S+++ TS+V Y + + A K+F +P R++V +N ++G QNG
Sbjct: 156 EVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFVRMPERDLVCWNTVVAGYAQNG 215
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
R + DM + +S+TLVS
Sbjct: 216 FARKALKLVLDMQED-GKKADSITLVS 241
>Medtr6g016020.1 | PPR containing plant-like protein | HC |
chr6:5715947-5718139 | 20130731
Length = 730
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%)
Query: 22 PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQN 81
QVHC +K G V SL+ Y+R L SA ++F+++PV+NVVS+N + +++N
Sbjct: 229 EQVHCLMTKSGFDCYVNAVNSLIGVYVRCRALCSAERLFEQVPVQNVVSWNMIIDSMVKN 288
Query: 82 GAPRLVFDVFKDMMR 96
G ++ +V+ +M+R
Sbjct: 289 GRSQMALEVYLNMLR 303
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH + G SDV V T+LV Y +F L+SA FD++ +NVVS+NA M G N
Sbjct: 332 VHAKVIRSGFESDVVVGTALVDFYAKFEKLISAHYCFDQIEEKNVVSWNALMLG-YSNVC 390
Query: 84 PRLVFDVFKDMMRS--FENE 101
+ ++M RS F NE
Sbjct: 391 SSTSILLLREMFRSGCFPNE 410
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 60.5 bits (145), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 47/68 (69%)
Query: 42 SLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENE 101
++++AY R G L SA +FD++P R+ VS+N+ ++G QNG +F++M+ S +++
Sbjct: 342 AMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSK 401
Query: 102 PNSVTLVS 109
P+ VT+VS
Sbjct: 402 PDEVTMVS 409
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
+V T+++T + + G L +A FD++P R+VVS+NA +SG Q GAP +F DM+
Sbjct: 199 NVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDML 258
Query: 96 RSFENEPNSVTLVS 109
+P+ T V+
Sbjct: 259 SPGNVQPDETTWVT 272
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 1 MPNSVTIATLLTA----RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSA 56
+PN+ T+A + +A DV + Q H A K G DVYV +SL+ Y + G + A
Sbjct: 115 IPNAHTLAGVFSAASNLSDV--VAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDA 172
Query: 57 GKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
K+FD +P RN VS+ +SG + +VF ++MR E N L S
Sbjct: 173 RKLFDRMPERNTVSWATMISGYASSDIADKAVEVF-ELMRREEEIQNEFALTS 224
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 13/116 (11%)
Query: 1 MPNSVTIATLL------TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLV 54
+PN +T+A++L A D G Q+H K G +V + ++L Y + G L
Sbjct: 418 IPNELTMASVLRACSSLAALDQGK----QMHARIIKYGFKLEVPIGSALSAMYTKCGSLD 473
Query: 55 SAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFEN-EPNSVTLVS 109
+F +P R+V+S+NA +SGL QNG ++F+ M+ E +P+ VT V+
Sbjct: 474 DGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKML--LEGIKPDPVTFVN 527
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 60.1 bits (144), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 9/95 (9%)
Query: 2 PNSVTIATLLTARDVGPIHV----PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAG 57
P++ TI +L A G H +H +SKLG++ D+YV SL+ Y FG +V+A
Sbjct: 105 PDNYTIPYVLKA--CGTFHDCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAAR 162
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNG---APRLVFD 89
VFDE+P NVVS++ +SG + G + RL FD
Sbjct: 163 YVFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFD 197
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 59.7 bits (143), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 3 NSVTIATLLTARDVGPI--HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
+ I LL A D P +V +H + K G DV++ T++V AY + GV+ A KVF
Sbjct: 50 DPTVIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVF 109
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
D + RN V++NA + G L+NG + F++M
Sbjct: 110 DLMHERNDVTWNAMIGGYLRNGDAKSALLAFEEM 143
Score = 45.8 bits (107), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ T+ ++L+A +G + Q+H G+ + +V + L+ Y + G LV+A V
Sbjct: 276 PDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLV 335
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F+ RNV +NA ++G NG V + + D M P++VT ++
Sbjct: 336 FESCNERNVFCWNAMIAGFAVNGQCNEVLE-YLDRMEESNIRPDAVTFIT 384
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 59.3 bits (142), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 2 PNSVTIATLL-TARDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T T+L T+ +G + V Q+H CA K + S+V+V ++LV Y++ + A K
Sbjct: 158 PNEFTFGTVLNTSTRLGKVGVGKQIHGCAIKTSLCSNVFVGSALVDLYVKLSSIEEAQKA 217
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEP 102
F++ NVVSY + G L++G F+D +R F P
Sbjct: 218 FEDTEYPNVVSYTTLIGGYLKSGR-------FEDALRVFNEMP 253
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 25 HCCASK-LGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
H CA K LG L+D +V SL++ Y + G + + +FD++ RNVVS+NA + G NG
Sbjct: 315 HACAIKFLGKLND-FVGNSLISFYAKCGSMKDSLLIFDKICKRNVVSWNAVICGYAHNGR 373
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLV 108
+F+ M S +PN V+L+
Sbjct: 374 GAEAISLFERMC-SEGIKPNKVSLL 397
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 1 MPNSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+PNSVTI ++L A V V ++HC A + ++S++ V+ L+ +Y + G L+ +
Sbjct: 523 LPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKN 582
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+F+EL ++ VS+N+ +S + +G D+F MR +PN T S
Sbjct: 583 IFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQ-MRKQGLQPNRGTFAS 632
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
++H A K+ ++ +V V SL+ Y + G L +A +FD + R+V S+N+ + G Q G
Sbjct: 375 EIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAG 434
Query: 83 APRLVFDVFKDMMRSFENEPNSVT 106
++F M S ++ PN +T
Sbjct: 435 FCGKAHELFMKMQES-DSPPNIIT 457
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 29 SKLGVLSDV--YVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRL 86
S++G++ +V +V T LV+ Y + G+L A KVF+E+ VRN+ +++A + G +N +
Sbjct: 107 SRIGLVENVNPFVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGE 166
Query: 87 VFDVFKDMMR 96
V +F MMR
Sbjct: 167 VVGLFYAMMR 176
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 58.9 bits (141), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTARDVG--PIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T + A + P+ Q+H A K G++ DV+V S Y + G A +
Sbjct: 106 PNDFTFPCVFKASALMQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFHGDACNM 165
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FDE+P RN+ ++NA++S +Q+ V FK+ + EPNS+T +
Sbjct: 166 FDEMPHRNLATWNAYISNAVQDRRSLDVIAAFKEFL-CVHGEPNSITFCA 214
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P I+++L+A ++G + + + VH A K V +++V ++LV Y + G + +A +V
Sbjct: 308 PTDFMISSVLSACAELGGLELGRSVHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQV 367
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM-MRSFENEPNSVTLVS 109
F ELP N+V++NA + G G + +F++M + S P+ VTLVS
Sbjct: 368 FSELPESNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSRGIRPSYVTLVS 418
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 1 MPNSVTIATLLTAR-DVGPIHVP-QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+PN T++T++ A + G + + QVH K G + V SL++ Y R G+L A
Sbjct: 191 LPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARD 250
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
VFD++ +R+ V++N+ ++G ++NG VF++F M
Sbjct: 251 VFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKM 286
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVHC K G++ V V TSLV Y++ + +VFDE+ RNVVS+ + ++G NG
Sbjct: 114 QVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNG 173
Query: 83 APRLVFDVFKDM 94
V+++F M
Sbjct: 174 LYGYVWELFCQM 185
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 2 PNSVTIATLLTA---RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
PN T ++++ A Q H A K+ + + + V+++LVT Y + G + SA +
Sbjct: 492 PNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHE 551
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMR 96
VF R++VS+N+ +SG Q+G + +VF +M +
Sbjct: 552 VFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQK 589
Score = 46.2 bits (108), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 2 PNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
PN T + +LT P+ V ++H K V T+L+ AY++ G + A KVF+
Sbjct: 395 PNHFTYSAILTVHY--PVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFE 452
Query: 62 ELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+ +++++++A ++G Q G +F +++ +PN T S
Sbjct: 453 IIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKE-GIKPNEFTFSS 499
>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:28350546-28353833 | 20130731
Length = 770
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+HC K G D ++++ LVT Y + G + A +VFD + RN V++ M G +QN
Sbjct: 100 IHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSM 159
Query: 84 PRLVFDVFKDMMRSFENEPNSVTL 107
P+ +F++M+ E P++ TL
Sbjct: 160 PKHAIHLFEEMLLHSECYPSNYTL 183
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K G LSDV V +S++ Y + G + A KVF E+ +R ++ + ++G Q+G
Sbjct: 417 QIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHG 476
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLV 108
+ ++F+D M+ PN VT V
Sbjct: 477 WSKQALNLFED-MKLVGIRPNLVTFV 501
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 18 PIHVP--------QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVV 69
P+H P +H K G++ + V+T+ Y + + A +FDE P + VV
Sbjct: 318 PLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVV 377
Query: 70 SYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
++NA +SG QNG+ +FK+MM++ E PN+VT+ +
Sbjct: 378 AWNAMISGYTQNGSTETAISLFKEMMKT-EFTPNAVTITT 416
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN+VTI T+L+A +G + + VH + ++YV+T+LV Y + G + A ++
Sbjct: 409 PNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQL 468
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD + +N V++N + G +G ++ +M+ N P++VT +S
Sbjct: 469 FDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYN-PSAVTFLS 517
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 20 HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLL 79
H+ +H + G S+V+V ++LV Y +F +V A KVFD +P R+ V +N ++GL+
Sbjct: 126 HLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLV 185
Query: 80 QNGAPRLVFDVFKDMM 95
+N +F++M+
Sbjct: 186 KNCCFDDSIQLFREMV 201
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P I+++L+A ++G + + + VH A K V +++V ++LV Y + G + +A +V
Sbjct: 308 PTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQV 367
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM-MRSFENEPNSVTLVS 109
F ELP RN+V++NA + G G + +F++M + S P+ VTL+S
Sbjct: 368 FSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLIS 418
Score = 56.2 bits (134), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTARDVG--PIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T + A P+ Q+H A K G++ DV+V S Y + G A +
Sbjct: 106 PNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNM 165
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FDE+P RN+ ++NA++S +Q+ FK+ + EPNS+T +
Sbjct: 166 FDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFL-CVHGEPNSITFCA 214
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H +K DVY+ ++LV Y + V+ SA + FD++ VRN+VS+N+ ++ QNG
Sbjct: 172 QIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNG 231
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+VF MM EP+ +TL S
Sbjct: 232 PAGKALEVFVRMMNC-GIEPDEITLAS 257
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 30 KLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFD 89
K G SD++V SL+ Y++ G++ VF+ + R+ VS+NA + G QNG +
Sbjct: 419 KSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALE 478
Query: 90 VFKDMMRSFENEPNSVTLV 108
+F++M+ S E P+ VT++
Sbjct: 479 IFREMLVSGE-RPDHVTMI 496
>Medtr8g035960.1 | PPR containing plant-like protein | HC |
chr8:13156718-13159093 | 20130731
Length = 791
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K G +V++ +LVT Y R+G L AG+VF+E+ +R++VS+NA +SG Q G
Sbjct: 208 QLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEG 267
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 2 PNSVTIATLLTARDVGPI--HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN VT LL A + + VH K + S+ V+ SL+T Y +F + + K+
Sbjct: 384 PNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKI 443
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F+EL + +S+NA +SG QNG + F F ++ E +PN T S
Sbjct: 444 FEELNYQGTISWNALISGYAQNGLCKEAFLTFLSAIK--EIKPNQYTFGS 491
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 2 PNSVTIATLLTA----RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAG 57
PN T ++L A D+ H + H KLG+ +D +VA +L+ Y + G + +
Sbjct: 484 PNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQ 543
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+VF+E P + S+ +S ++G V ++K++ R N +S+T +S
Sbjct: 544 RVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIEREGSNL-DSITFLS 594
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 1 MPNSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFG-VLVSAG 57
MP+SVTIAT+L AR VH K G D + +LV+ Y + G V A
Sbjct: 143 MPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAY 202
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VFD + ++VVS+NA ++GL +NG + F +F MM+ +PN T+ +
Sbjct: 203 AVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKG-SVKPNYATVAN 253
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Query: 7 IATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVR 66
+ TL + V Q+HC A G SDV V +LVT Y R G + A KVFDE+ R
Sbjct: 160 LKTLALSSSVCYKSAKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTER 219
Query: 67 NVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENE---PNSVTLVS 109
++V++NA + G Q+G ++ +M+ E + PN+VT+ S
Sbjct: 220 DIVTWNAMIGGYSQSGFYEECKRLYLEML-GLEGKGILPNAVTIGS 264
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 1 MPNSVTIATLLTA----RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSA 56
+PN+VTI +++ A +D+ +VH G+ +DV++ +++ Y + G L A
Sbjct: 256 LPNAVTIGSVMQACGQSKDLS--FGMEVHRFMKDDGIETDVFLCNAIIAMYAKCGSLNYA 313
Query: 57 GKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFK 92
++FDE+ ++ VSY + +SG + NG DV K
Sbjct: 314 RELFDEMGEKDEVSYRSIISGYMINGFVDEALDVLK 349
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P++ T+A+++TA +G ++ + +H + + D SLVT Y + G L + V
Sbjct: 367 PSTETMASVITACAQLGAFNLGKSIHGYILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIV 426
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD + R++VS+NA ++G QNG F +F + MRS P+S+T+VS
Sbjct: 427 FDRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNE-MRSCHQTPDSITIVS 475
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 32 GVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVF 91
G+ +D Y+A+SL+ Y++FG A KVFD +P RNVV + + + G R F +F
Sbjct: 99 GLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAFSLF 158
Query: 92 KDMMRSFENEPNSVTLVS 109
+ MR +P+SVTL+S
Sbjct: 159 RQ-MRYEGIQPSSVTLLS 175
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 2 PNSVTIATLLTARDVGPIHVPQVHC---CASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
P+SVT+ +LL G VP V C CA G +SD+ + S+V Y + G + K
Sbjct: 168 PSSVTLLSLL----FGVSEVPYVQCLHGCAIFYGFMSDLNLLNSMVNLYGKCGSIEDCRK 223
Query: 59 VFDELPVRNVVSYNAFMSGLLQNG 82
+F+ + R+VVS+N+ +S Q G
Sbjct: 224 LFEFMDRRDVVSWNSLLSAYAQIG 247
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH ++G++ V + T+L+ Y R G++ + KVFDE+P RNVV++ A ++GL +G
Sbjct: 204 VHSFIVRMGIVMTVPLGTALINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGR 263
Query: 84 PRLVFDVFKDMMRS 97
R VF +M S
Sbjct: 264 SREALKVFYEMKES 277
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 30 KLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFD 89
KLG ++++V +L+ AY G L A K+FDE+ R++VS++ +S L++N P
Sbjct: 105 KLGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALS 164
Query: 90 VFKDM 94
VF+ M
Sbjct: 165 VFQQM 169
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH A KLG S VYVA+SL+ Y + +L A KVFD + RNVV +N + QNG
Sbjct: 264 VHGEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGC 323
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
V ++F +MM N+P+ T S
Sbjct: 324 LSDVMELFSEMM-GCGNDPDEFTYSS 348
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Query: 1 MPNSVTIATLLTA-------RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVL 53
+P+ T T+L A +D IH H G D +++LV Y + G +
Sbjct: 644 LPDQATFVTVLRACALLSSLQDGQEIHSLIFHT-----GFDLDELTSSALVDMYAKCGDV 698
Query: 54 VSAGKVFDELPV-RNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
SA KVF+ELP+ ++V+S+N+ + G +NG VF +M S P+ VT +
Sbjct: 699 KSAAKVFEELPIKKDVISWNSMIVGFAKNGYAERALKVFDEMTLS-SVSPDDVTFL 753
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 2 PNSVTIATLLT--ARDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
PN T+A++L+ AR G + + + +H GV V + T+LV Y + G +++A K
Sbjct: 238 PNGATLASVLSVCARS-GCLELGERIHEFMRVKGVEVGVILGTALVYMYAKNGDILTARK 296
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+FDE+P RNVV++NA + GL +G +F+ M PN+VT V
Sbjct: 297 LFDEMPERNVVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVG 347
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 20 HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLL 79
H QVH K G+ D +V LV Y G LV A VFDE+P++N+ + + G
Sbjct: 157 HCKQVHAHVVKFGLCFDCHVGNGLVRGYSVSGDLVDARYVFDEIPMKNLSLWTTMICGYA 216
Query: 80 QNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
QN D+F+ M+ EPN TL S
Sbjct: 217 QNCCYNEALDLFERMV-VVGFEPNGATLAS 245
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H C K G +V+V +SLV Y R G L + VFDEL +N VS+NA +SG + G
Sbjct: 216 QIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKG 275
Query: 83 APRLVFDVFKDMMR 96
+F M R
Sbjct: 276 EGEEALGLFVKMQR 289
Score = 52.4 bits (124), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 38 YVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS 97
YV +L+ Y + G + A KVFD L +VVS N+ + G Q+G + ++F++MM
Sbjct: 332 YVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLW 391
Query: 98 FENEPNSVTLVS 109
E EPN +T +S
Sbjct: 392 VEIEPNDITFLS 403
>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:21642144-21644166 | 20130731
Length = 625
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 20 HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLL 79
H +VHC + G DV + ++LV Y + G++ A +F + VRN++++N+ +SG
Sbjct: 373 HGKEVHCMYVRKGGSKDVIIESALVDLYAKCGMVDFACTMFASMEVRNLITWNSMVSGFA 432
Query: 80 QNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
QNG +F+DM++ +P+S+T V+
Sbjct: 433 QNGRGVEALALFEDMIKE-GIKPDSITFVA 461
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 20 HVPQVHCCASKLGVLSDVYVATSLVTAYLRFG---VLVSAGKVFDELPVRNVVSYNAFMS 76
H VH K G+ SD +V SL+T Y + L A +FD L V++V+S+ + +S
Sbjct: 68 HGASVHAHVLKSGLHSDRFVGNSLLTLYFKLNPGPHLSHARHLFDSLHVKDVISWTSLIS 127
Query: 77 GLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
G ++ P +F +M+ +F +PN+ TL S
Sbjct: 128 GYTRSDLPHQSISLFYEML-AFPVQPNAFTLSS 159
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 11/114 (9%)
Query: 2 PNSVTIATLLTA------RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVS 55
P+SVT+A++L A + +G VH LG+ DV+V TSLV Y G S
Sbjct: 237 PSSVTMASILKACGESGHKKLGTC----VHVFVLALGMGDDVFVLTSLVDMYCNVGDTES 292
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
A VF+ + R+++S+NA +SG +QNG F +F +++S + +S TLVS
Sbjct: 293 AFLVFNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGF-DSGTLVS 345
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H C + G+ S++ ++T++V Y + G + A VF + RNV+++ A + GL QNG
Sbjct: 362 LHACIIRKGLESNLVLSTAIVDMYSKCGAIKQASDVFRTMEKRNVITWTAMLVGLSQNGY 421
Query: 84 PRLVFDVFKDMMRSFEN-EPNSVTLVS 109
+F M EN NSVTLVS
Sbjct: 422 AEGALKLFCRMQE--ENVAANSVTLVS 446
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 57.4 bits (137), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 1 MPNSVTIATLLTA--RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
MPN T ++ + + G +VHCCA+K G S+ +VATSL+ Y + G + A K
Sbjct: 107 MPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYK 166
Query: 59 VFDELPVRNVVSYNAFMSGLLQNG---APRLVFDV 90
VF E+ RNVV + A ++G + G + R +FD+
Sbjct: 167 VFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDL 201
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 1 MPNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+PN T+ +L+A +G + + + VH A +G +++V L+ Y + GV+ +A
Sbjct: 302 IPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVV 361
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
VF+ L ++++S+N ++GL +G +F D M+S EP+ VT V
Sbjct: 362 VFNCLDRKDIISWNTIINGLAIHGHAPDALGMF-DRMKSEGEEPDGVTFV 410
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H C K G++ D+ V +SLV Y + A K+FDE+P ++V +N +S Q+G
Sbjct: 128 IHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGK 187
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
F MMR F EP+SVT+ +
Sbjct: 188 FEEALRYF-GMMRRFGFEPDSVTITT 212
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H C K G++ D+ V +SLV Y + A K+FDE+P ++V +N +S Q+G
Sbjct: 128 IHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGK 187
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
F MMR F EP+SVT+ +
Sbjct: 188 FEEALRYF-GMMRRFGFEPDSVTITT 212
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 1 MPNSVTIATLLT--ARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+P+ T+ +L AR G V Q+H A K + D++V S V Y G V A K
Sbjct: 106 VPDVYTVPAVLKSCARFSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASK 165
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSF---ENEPNSVTLVS 109
VFD +PVR+VVS+ +SG ++ G +F D + F + PN+ T VS
Sbjct: 166 VFDFMPVRDVVSWTGLISGYMKAG-------LFNDAVALFLRMDVAPNAATFVS 212
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN+ T ++L A +G +++ + +H SK ++ V+ +L+ Y++ + A ++
Sbjct: 205 PNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRL 264
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FDE+P +++VS+ + +SGL+Q P+ D+F +M+ S EP+ V L S
Sbjct: 265 FDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGS-GFEPDGVILTS 313
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
DV++ TSL+ Y + G + A ++F+ LP +N+ ++NA++ GL NG + F ++
Sbjct: 342 DVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFGYLV 401
Query: 96 RSFENEPNSVTLVS 109
S PN +T ++
Sbjct: 402 ES-GTRPNEITFLA 414
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 56.6 bits (135), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 2 PNSVTIATLL-TARDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+S+TI TLL T ++ + V QVHC + K G++ DV V L+ Y + G L A V
Sbjct: 469 PDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDV 528
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVT 106
FD ++VS+++ + G Q G ++F+ +M + +PN VT
Sbjct: 529 FDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFR-IMTNLGVQPNEVT 574
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH K G+ +V+ SL Y +FG L SA F ++ ++VS+NA ++ NG
Sbjct: 289 QVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNG 348
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
D F+ M+ P+S+T +S
Sbjct: 349 DANEAIDFFRQMIH-IGLTPDSITYIS 374
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 2 PNSVTIATLLTARDVGPIHVPQ---VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
P+S+T +LL P+ + Q +H K+G ++ V SL+T Y + L A
Sbjct: 367 PDSITYISLLCTCG-SPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALN 425
Query: 59 VFDELPVR-NVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VF ++ N+VS+NA +S LQ F ++K+M S N+P+S+T+ +
Sbjct: 426 VFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFS-GNKPDSITITT 476
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLT--ARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ + AT+ + A+ Q+H K G + +V+V +SLV Y + G + +A
Sbjct: 517 PSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYY 576
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD +P +N+V++N + G NG ++KDM+ S E +P+ +T V+
Sbjct: 577 FDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGE-KPDDITFVA 625
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ T+A +L++ ++G + QVH + KLG DVYVA+SL+ Y + G + + V
Sbjct: 416 PDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHV 475
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F +L +VV +N+ ++G N + FK MR F P+ + +
Sbjct: 476 FSKLSELDVVCWNSMIAGFSINSLEQDALACFK-RMRQFGFFPSEFSFAT 524
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
Query: 2 PNSVTIATLLT--ARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+S TI+T+++ A+ H VH +GV S++ V+++LV Y + GV + A +
Sbjct: 328 PDSHTISTVVSSCAKLASLYHGQAVHGKVILMGVDSNMLVSSALVDMYCKCGVPLDARVI 387
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFEN-EPNSVTLV 108
F+ +P++NV+ +N+ + G QNG +++ M++ EN +P++++ V
Sbjct: 388 FETMPIKNVIIWNSMILGYAQNGEAEEALTLYERMLQ--ENFKPDNISFV 435
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 20 HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLL 79
H +H +LG +D +V TSLV Y + V+ SA KVFDE+P R+VVS+N+ +S
Sbjct: 28 HGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSVIESARKVFDEMPERSVVSWNSLISAYC 87
Query: 80 QNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+ K+M+ +P+S T VS
Sbjct: 88 HESMMEKALSLIKEML-VLGFKPSSSTFVS 116
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+H K G + VYV T+L+ Y + G +V+A KVFDE+P +NVVS+N+ +SG ++ G
Sbjct: 126 IHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGG 184
>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
| 20130731
Length = 596
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+HC A K D++V +S++ Y + G + A VFDE+P RNVVS++ + G +Q G
Sbjct: 143 LHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGE 202
Query: 84 PRLVFDVFKDMMRSFENEP-NSVTLVS 109
+FK + ENE N TL S
Sbjct: 203 DDESLRLFKRFLVEEENEGVNDFTLSS 229
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 56.2 bits (134), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 2 PNSVTIAT-LLTARDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN++++ + LL D+ + QVH K + D TSL++ Y + G L + +
Sbjct: 260 PNALSLTSVLLGCSDLSALQTGKQVHQLVCKSPLSRDTTAVTSLISMYSKCGDLKDSWDL 319
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F ++P ++VV++NA +SG Q+GA +F +M +S E +P+ +T V+
Sbjct: 320 FVQIPRKDVVTWNAMISGYAQHGAGEKALHLFDEMKKS-EIKPDWITFVA 368
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 56.2 bits (134), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K G S+ YV +LVT Y R G L SA ++F + R+ VSYN+ +SGL Q G
Sbjct: 305 QLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQG 364
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+FK M + +P+ VT+ S
Sbjct: 365 YINRALALFKKMNLDCQ-KPDCVTVAS 390
Score = 53.1 bits (126), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 3 NSVTIATLLTAR-DVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
NS T + ++A ++ + + Q+H K G S+ V+ +L+T Y + G + A + F
Sbjct: 687 NSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDDAERHF 746
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
E+P +N +S+N+ ++G Q+G +F+D M+ + PN VT V
Sbjct: 747 FEMPDKNEISWNSMITGYSQHGCGFEALKLFED-MKQLDVLPNHVTFV 793
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 21 VPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQ 80
V Q+H G S ++ L+ Y + G L SA KVF+ L R+ VS+ A +SGL Q
Sbjct: 202 VEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQ 261
Query: 81 NGAPRLVFDVFKDMMRS 97
NG +F M S
Sbjct: 262 NGYEEEAMLLFCQMHTS 278
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 2 PNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
P+ + T L A D+G Q+H K G +VYV++ L+ Y + G L A K+F
Sbjct: 490 PSILKTCTTLGATDLGE----QIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFR 545
Query: 62 ELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
L +VVS+ A ++G Q+ ++FK+M
Sbjct: 546 RLKENDVVSWTAMIAGYTQHDKFTEALNLFKEM 578
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 3 NSVTIATLLTARDVGP--IHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
+SV+++ L+A P + ++HC + +SD +VA++L+ Y + G L A VF
Sbjct: 580 DSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVF 639
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
D + +N VS+N+ ++ +G PR D+F +M+ + +P+ VT +
Sbjct: 640 DMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEA-GIQPDHVTFL 686
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH A +G D+++ +SL+ Y G + A +FDELPVR+ + +N ++G ++NG
Sbjct: 199 VHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGD 258
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLV 108
F++ MR+ +PNSV+ V
Sbjct: 259 FNSALGTFQE-MRNSCVKPNSVSFV 282
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 2 PNSVTIATLLT---ARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
PNSV+ LL+ R + + Q+H + G SD VA +++T Y + G L A K
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGI-QLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARK 334
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS 97
+FD +P + V++N ++G +QNG +FK M+ S
Sbjct: 335 IFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTS 373
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN +T+A++L A + + + ++HC K G+ + V +S+ Y + G L A +
Sbjct: 478 PNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQF 537
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
F +PV++ V +N + QNG P L D+F+ M
Sbjct: 538 FRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQM 572
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 55.8 bits (133), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 42 SLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFEN- 100
++++AY R G L SA +FD++P R+ VS+N+ ++G QNG +F++M+ S ++
Sbjct: 327 AMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSR 386
Query: 101 EPNSVTLVS 109
+P+ VT+VS
Sbjct: 387 KPDEVTMVS 395
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
+V T+++T + + G L +A FD++P R+VVS+NA +SG Q GAP +F DM+
Sbjct: 184 NVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDML 243
Query: 96 RSFENEPNSVT 106
+P+ T
Sbjct: 244 SPGNVQPDETT 254
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+VH K L V++ T L+ Y + L A VFDE+P RNVVS+ A +S Q G
Sbjct: 61 RVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRG 120
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
++F M+RS EPN T +
Sbjct: 121 YASQALNLFLQMLRS-GTEPNEFTFAT 146
Score = 52.4 bits (124), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 2 PNSVTIATLLTA--RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T AT+LT+ +G I Q+H KL V+V +SL+ Y + G + A V
Sbjct: 139 PNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTV 198
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
F+ LP R+VVS A +SG Q G ++F+ +
Sbjct: 199 FECLPERDVVSCTAIISGYAQLGLDEEALELFRRL 233
Score = 49.3 bits (116), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 5 VTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELP 64
+T + L A D+G QVH + + S V + SL+ Y + G L + ++FD +
Sbjct: 249 LTALSGLAALDLGK----QVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMY 304
Query: 65 VRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
R V+S+NA + G ++G R V +F M + +P+SVT+++
Sbjct: 305 ERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILA 349
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 55.8 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 48/72 (66%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+++ A ++G++SD+ VAT +V Y + G L A ++F L R++V+++AF+S L++ G
Sbjct: 320 EIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETG 379
Query: 83 APRLVFDVFKDM 94
PR V +F+ M
Sbjct: 380 YPREVLSIFQVM 391
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 32 GVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVF 91
G+ DVY+ TSL+ + + G L +A VFD++PV++ V +NA +SGL Q+ P ++F
Sbjct: 129 GLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMF 188
Query: 92 KDM-MRSFENEPNSV 105
M M FE + S+
Sbjct: 189 WRMQMEGFEVDKVSI 203
Score = 53.1 bits (126), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+HC A K + SD+ + T+LV+ Y+RF + A +F+ + ++++V +N ++G + G
Sbjct: 422 MHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGD 481
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLV 108
P L ++F + S P+S T+V
Sbjct: 482 PHLALEMFNRLQLS-GILPDSGTMV 505
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 2 PNSVTIATLLTARDVGPI--HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN VT T+L A I H C ++G LS + SL+ Y + G L + K
Sbjct: 601 PNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKC 660
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS 97
F E+ ++ +S+NA +S +G L +F M S
Sbjct: 661 FHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQES 698
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 49/86 (56%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H K+ + D++V ++L+ Y + G + A KVF E P +VV + + +SG Q+G+
Sbjct: 99 IHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGS 158
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
P L F M+ S + P+ VTLVS
Sbjct: 159 PELALAFFSRMVVSEKVSPDPVTLVS 184
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 49/86 (56%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H K+ + D++V ++L+ Y + G + A KVF E P +VV + + +SG Q+G+
Sbjct: 99 IHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGS 158
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
P L F M+ S + P+ VTLVS
Sbjct: 159 PELALAFFSRMVVSEKVSPDPVTLVS 184
>Medtr7g103230.1 | PPR containing plant-like protein | HC |
chr7:41735375-41738881 | 20130731
Length = 970
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 2 PNSVTIATLLTA--RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T +LTA R + Q+H K G L V+V+ +L+ Y + G +A KV
Sbjct: 163 PNHYTYVAVLTACTRILNLQFGLQLHAAVIKTGYLKSVFVSNALMLFYSKCGFYKNAFKV 222
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
FDE+P R++ S+N MS +Q VF +F DM+
Sbjct: 223 FDEMPERDIASWNTVMSCAVQEFMYDDVFRLFCDML 258
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H A K G S+V+V +L+ Y R G +V A K+++EL + V + + M G +NG
Sbjct: 420 QMHGFAIKFGFGSNVFVEGALLDMYTRCGRMVDAEKMWEELEEVSSVVWTSMMCGYARNG 479
Query: 83 APRLVFDVF 91
PR F +F
Sbjct: 480 QPREAFSLF 488
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 21 VPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQ 80
+ V C ++ V DV T +V Y+ FG + K+FDE+P +N V+YN +SGL +
Sbjct: 318 IDDVVCLFERMSV-RDVITWTEMVRVYMEFGFVDLGLKIFDEMPEKNCVTYNVLLSGLCR 376
Query: 81 NGAPRLVFDVFKDMM 95
N ++F M+
Sbjct: 377 NAEGLKAVELFIRMV 391
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 49/86 (56%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H K+ + D++V ++L+ Y + G + A KVF E P +VV + + +SG Q+G+
Sbjct: 129 IHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGS 188
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
P L F M+ S + P+ VTLVS
Sbjct: 189 PELALAFFSRMVVSEKVSPDPVTLVS 214
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 49/86 (56%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H K+ + D++V ++L+ Y + G + A KVF E P +VV + + +SG Q+G+
Sbjct: 129 IHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGS 188
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
P L F M+ S + P+ VTLVS
Sbjct: 189 PELALAFFSRMVVSEKVSPDPVTLVS 214
>Medtr5g012660.1 | PPR containing plant-like protein | HC |
chr5:3861054-3862731 | 20130731
Length = 519
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 48/86 (55%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+HCC K G+ S + V +SL+ Y + G + A +F+ L RN+VS+NA + G +NG
Sbjct: 292 IHCCTIKYGLDSSIVVGSSLIDMYSKCGQVNDAESIFNVLSNRNLVSWNAMIYGYARNGD 351
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
+F+ + + +P+ +T ++
Sbjct: 352 SAQAISLFELLKMERDTKPDGITFLN 377
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 23 QVHCCASKLGVL-SDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQN 81
Q+H A + G +++YV+T+L+ Y++ + A +F E+P NVVS+N +SG +
Sbjct: 26 QIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYVHA 85
Query: 82 GAPRLVFDVFKDMMRS 97
G + +F + RS
Sbjct: 86 GQFKKALSLFTKLERS 101
>Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:49468862-49466962 | 20130731
Length = 589
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 1 MPNSVTIATLLTARDV-GPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
MPN T +TL+ A + + ++H G SD+ V +SL+ Y + + A
Sbjct: 121 MPNEFTFSTLINACSILANLETGRRIHALVEVFGYRSDLVVCSSLIDMYGKCNRVDEAQM 180
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+FD + VRNVVS+ + ++ QNG L +F++ N+PN L S
Sbjct: 181 IFDFMWVRNVVSWTSMITTYSQNGQGHLALQLFREFNHIRMNKPNHFMLCS 231
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 13 ARDVGPIH----VPQ---VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPV 65
A ++G H +P H K G+ +D + +L+ +YL+ + A K+FDE+
Sbjct: 27 AHNIGKFHTFNHLPSATPTHANVVKSGLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSH 86
Query: 66 RNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
NVVS++ M+G ++ G P + +F M
Sbjct: 87 PNVVSWSLLMAGYVRQGQPNIALCLFHQM 115
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 2 PNSVTIATLLTARDVGPIHVP---QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
PNS TI +LL A GP + ++HC + KLG + D+YVAT+L+ Y G L A
Sbjct: 563 PNSTTICSLLCAC-AGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYN 621
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VF+++ + + +N M G + V + D MR P+++T +
Sbjct: 622 VFNKIQEKTLPCWNCMMMGYAIHSHGEEVM-ILYDKMRERHIRPDAITFTA 671
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLL-TARDVGPIHVP-QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN VTI+++L ++G + +VH + ++G+ SD+++ SL+ Y + G A +
Sbjct: 336 PNPVTISSMLPVLGELGLFKLGMEVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTI 395
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F+++ RN+VS+N+ ++ QN ++ + M EN PN+VT +
Sbjct: 396 FNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAHGEN-PNNVTFTN 444
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ VT+ ++L A + VH K+G+ V V +LV Y + G + KV
Sbjct: 235 PDLVTVVSVLPVCADSENVVMARIVHGYVFKVGLSGHVKVGNALVDVYGKCGSEEACKKV 294
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FDE+ RN VS+NA ++G G D F+ M+ + PN VT+ S
Sbjct: 295 FDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSMINT-GMRPNPVTISS 343
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGP-IHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T+A++L + ++G ++ +H K G+ S V TSL+T Y + ++ + KV
Sbjct: 201 PNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKV 260
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F+ L + V++ +F+ GL+QNG + +F++MMR PN TL S
Sbjct: 261 FNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRC-SISPNHFTLSS 309
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 1 MPNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGV-LSDVYVATSLVTAYLRFGVLVSAG 57
+P++ T + + A ++G Q H A LG +SD +VAT +V Y +FG + A
Sbjct: 98 LPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDAR 157
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VFD + ++VV + A + G Q+G +VF+DM+ S +PN TL S
Sbjct: 158 FVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGS-RIKPNEYTLAS 208
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T++++L A + + Q+H KLGV + +V +L+ Y + G + A V
Sbjct: 302 PNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSV 361
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD L ++VS N + QNG ++F + ++ EPN VT +S
Sbjct: 362 FDSLTELDIVSINTMIYAYAQNGFGHEALELF-ERLKKLGLEPNVVTFIS 410
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 1 MPNSVTIATLLTARD--VGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
M N T A LL A H +H KLG+ + V V +L+ Y + G + S+
Sbjct: 325 MSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYD 384
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
VF ++ R+++++NA + G Q+G + +F+DM+ + E PN VT V
Sbjct: 385 VFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGEC-PNHVTFV 433
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 14 RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNA 73
RD+G QVH K G+ DV+V + LV + + G ++SA KVFD L RNVV + +
Sbjct: 241 RDLGL--GLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTS 298
Query: 74 FMSGLLQNGAPRLVFDVFKDMMRS 97
M+ LQNG ++ M R
Sbjct: 299 LMTAYLQNGEFEETLNLLSCMDRE 322
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH KLG+ S+ Y + + Y + G SA KVFDE + S+NA +SGL Q G
Sbjct: 118 QVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGG 177
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
VF DM R EP+ +T+VS
Sbjct: 178 LAMDAIVVFVDMKRH-GFEPDGITMVS 203
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH K G+ S++ V +L+ Y + G + A VF ++PV+++VS+N + G QN
Sbjct: 694 VHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSL 753
Query: 84 PRLVFDVFKDMMRSFENEPNSVTL 107
P ++F DM + F +P+ +T+
Sbjct: 754 PNEALELFLDMQKQF--KPDDITM 775
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+VH KLG S+ V SL+ AY +FG + SA +FDEL +VVS+N+ ++G + NG
Sbjct: 491 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 550
Query: 83 APRLVFDVFKDMM 95
++F M+
Sbjct: 551 FSGNGLEIFIQML 563
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
++H + G V+V T+L+ Y RFG + A VF +P +N+VS++A ++ +N
Sbjct: 200 EIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNE 259
Query: 83 APRLVFDVFKDMM-RSFENEPNSVTLVS 109
P ++F+ MM + + PN +T+VS
Sbjct: 260 MPMKALELFQIMMLEACDTVPNPITMVS 287
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 1 MPNSVTIATLLTA-RDVGPIHVP-QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+P+S T + +L A + H+ +H K G DV+V T++V Y + G L A K
Sbjct: 101 VPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWK 160
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS 97
VFD++ V+NVVS+ + G ++ G R D+F+ ++ S
Sbjct: 161 VFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLES 199
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 27 CASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRL 86
C + G+ +V+VATSLV Y + G + A VFD + +++V ++A + G NG PR
Sbjct: 230 CMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPRE 289
Query: 87 VFDVFKDMMRSFENEPNSVTLV 108
++F + MR P+ +V
Sbjct: 290 AIELFFE-MRKVNVRPDCYAMV 310
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 2 PNSVTIATLL--TARDVGPIHVPQ-VHCCASKLGVLSDVY-VATSLVTAYLRFGVLVSAG 57
P+ T+ T+L AR +G + + +H A G+L V V SLV Y + G L +A
Sbjct: 238 PDDATLVTVLPVCAR-LGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAW 296
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMR 96
KVF+E+ +NVVS+NA +SGL NG L ++F+ M R
Sbjct: 297 KVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMAR 335
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 5 VTIATLLTA-RDVGPIHVPQ-VHCCASK-LGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
VT+ ++L+A G + V + VHC A K +G+ V V TSLV Y + G + +A VF
Sbjct: 257 VTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFR 316
Query: 62 ELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+ RNVV++NA + GL +G ++ D+F M+ E +P+ VT ++
Sbjct: 317 SMLKRNVVAWNAMLGGLAMHGMGKIAVDMFPSMVE--EVKPDGVTFMA 362
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T A +L A D+ + +VH +++G + A++LV Y + G +A +V
Sbjct: 295 PNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRV 354
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
F+++P ++VS+ + + G QNG P + F+ ++RS +P+ +T V
Sbjct: 355 FNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRS-GTKPDEITFV 402
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ +T+A++L+A +G + V + VH K V +D+YV +L+ Y + G + V
Sbjct: 307 PDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSV 366
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS 97
F+E+ R+ VS+ + ++GL NG+ ++F M+R
Sbjct: 367 FEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLRE 404
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 3 NSVTIATLLTA-RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
N++T LL A + + VH KLG SD++V+ +L+ Y F L A KVFD
Sbjct: 76 NNLTYPFLLKACARISNVSCTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFD 135
Query: 62 ELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
E+ R++VS+N+ + G + V VF++ MR + + ++VT+V
Sbjct: 136 EMSERDLVSWNSLICGYGRCRRYSEVLVVFEE-MRMADVKGDAVTMVK 182
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 2 PNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
PNS T TL+ A V + QV + KLG SDVY +S++ A+ + + A +VFD
Sbjct: 86 PNSHTFTTLVKAC-VSLSSLEQVFTLSMKLGNSSDVYFVSSVINAFSKHSAIHLARQVFD 144
Query: 62 ELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
E RNVV + + +SG G DVF M NE + +VS
Sbjct: 145 ECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKM--PLRNEASYSAMVS 190
Score = 52.8 bits (125), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H + G+ D+ + T+L+ Y++ G + A KVF+++PV++V +++A + GL NG
Sbjct: 244 IHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAINGN 303
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLV 108
++ ++F+ M + +PN VT V
Sbjct: 304 NKMALELFEKMEK-VGPKPNEVTFV 327
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 24 VHCCASKLGVLSD--VYVATSLVTAYLRFGVLVSAGKVFDELP--VRNVVSYNAFMSGLL 79
+H K+G D VYVATSLV Y + GVL A KVFDE+P RN V +N+ + G +
Sbjct: 229 IHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYV 288
Query: 80 QNGAPRLVFDVFKDMMRSFENEPNSVTL 107
QNG +F+ M EP+ V+L
Sbjct: 289 QNGMNVEAVGLFEKMRFEGGVEPSEVSL 316
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 1 MPNSVTIATLLTA-RDVGPIHVP-QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
MPN T+ ++LTA ++G +++ VH + DV + T L+T Y + G + A
Sbjct: 315 MPNEATLVSVLTACANLGKLNLGLWVHSYIKSNEIKLDVLLETCLLTMYAKCGAMDLASD 374
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
VF E+PV+++VS+N+ + G +G ++F +M ++ + +PN T +
Sbjct: 375 VFVEMPVKSIVSWNSMIMGYGLHGNGDKALEMFAEMEKAGQ-KPNEATFI 423
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 25 HCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAP 84
H K G LSD++V SL+ Y FG + A +F E V ++VSYN + G ++NG
Sbjct: 143 HARVVKFGFLSDLFVRNSLIRMYSVFGRIDDARLIFYESYVLDLVSYNTMIDGYVKNGGI 202
Query: 85 RLVFDVFKDM 94
R +F +M
Sbjct: 203 RDARKLFDEM 212
>Medtr4g083630.1 | PPR containing plant-like protein | HC |
chr4:32536076-32533157 | 20130731
Length = 708
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K SDV++ TSL+ Y + G +VS+ KVFD + VRN ++ + +SG +NG
Sbjct: 372 QLHGAIVKKICKSDVFIGTSLIDMYAKCGEIVSSKKVFDRMKVRNTATWTSIISGYARNG 431
Query: 83 APRLVFDVFKDMMR 96
+ F+ M R
Sbjct: 432 FGEEALNFFRLMKR 445
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 1 MPNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
+PNS T ++ L A C + LS+V+V ++L+ Y + G + A +VF
Sbjct: 550 LPNSYTYSSALKA------------CAKLETPALSNVFVNSALIYMYAKCGYIADAFQVF 597
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
D +P RN+VS+ A + G +NG R + M
Sbjct: 598 DNMPERNLVSWKAMILGYARNGHCRKALQLMYRM 631
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 21 VPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQ 80
V +VH A K S YV +L+ +YLR G L A KVFD + RN V++ A + G L+
Sbjct: 169 VGRVHTIALKCFRGSSTYVDNNLICSYLRLGKLAQARKVFDGMSRRNTVTWTAIIDGYLK 228
Query: 81 NGAPRLVFDVFKDMMRSFENEPNSVTLV 108
F +F ++ +PNS V
Sbjct: 229 YDLDDEAFKLFHGSIKH-GVQPNSKMFV 255
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H K+ + +D++V ++L+ Y + G + A +VF E P +VV + + +SG Q+G+
Sbjct: 129 IHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGS 188
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
P L F M+ S + P+ VTLVS
Sbjct: 189 PELALAFFSRMVVSEKVSPDPVTLVS 214
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H K+ + +D++V ++L+ Y + G + A +VF E P +VV + + +SG Q+G+
Sbjct: 129 IHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGS 188
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
P L F M+ S + P+ VTLVS
Sbjct: 189 PELALAFFSRMVVSEKVSPDPVTLVS 214
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 37 VYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMR 96
V + ++V Y + G + +A +VF +P RN++S+N ++G NG + +VF D MR
Sbjct: 363 VTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVF-DQMR 421
Query: 97 SFENEPNSVTLVS 109
+ EPN++T VS
Sbjct: 422 NMGFEPNNITFVS 434
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
DVY TS+V Y + G L SA + FD+ P +N V ++A ++G QN P+ +F +MM
Sbjct: 260 DVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMM 319
Score = 46.6 bits (109), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
V+C K+G ++ V L+ Y G+L +A +VFDE ++VV++ + G +
Sbjct: 116 VYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDC 175
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
+VF+ M+ S EPN VTL++
Sbjct: 176 SEEAMEVFELMLLS-HVEPNEVTLIA 200
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 43 LVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEP 102
+V+ Y+R G + +A K+FD +P + VSY + G +QNG R +VFKD MRS P
Sbjct: 125 MVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKD-MRSCGVVP 183
Query: 103 NSVTLVS 109
N +TLV+
Sbjct: 184 NDLTLVN 190
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 26 CCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPR 85
C ++GV + +L +++ G++ A K FD++ VR+V S++ +SG Q+ P+
Sbjct: 372 CLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPK 431
Query: 86 LVFDVFKDMMRSFENEPNSVTLVS 109
+ ++F M+ +PN VT+VS
Sbjct: 432 MALELFHKMLAG-GIKPNEVTMVS 454
Score = 45.8 bits (107), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 1 MPNSVTIATLLTA-RDVGPI-HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+PN +T+ +++A +G + + VH K+ V+ V V+T+L+ AY + A +
Sbjct: 182 VPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARR 241
Query: 59 VFDELPVRNVVSYNAFMSGLLQNG---APRLVFD 89
+FDE+P RN+V++N ++G + G R +FD
Sbjct: 242 LFDEMPERNLVTWNVMLNGYAKTGLVDEARELFD 275
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H K+ + +D++V ++L+ Y + G + A +VF E P +VV + + +SG Q+G+
Sbjct: 37 IHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGS 96
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
P L F M+ S + P+ VTLVS
Sbjct: 97 PELALAFFSRMVVSEKVSPDPVTLVS 122
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 37 VYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMR 96
V + ++V Y + G + +A +VF +P RN++S+N ++G NG + +VF D MR
Sbjct: 413 VTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVF-DQMR 471
Query: 97 SFENEPNSVTLVS 109
+ EPN++T VS
Sbjct: 472 NMGFEPNNITFVS 484
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
DVY TS+V Y + G L SA + FD+ P +N V ++A ++G QN P+ +F +MM
Sbjct: 310 DVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMM 369
Score = 46.6 bits (109), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
V+C K+G ++ V L+ Y G+L +A +VFDE ++VV++ + G +
Sbjct: 166 VYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDC 225
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
+VF+ M+ S EPN VTL++
Sbjct: 226 SEEAMEVFELMLLS-HVEPNEVTLIA 250
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 13/107 (12%)
Query: 2 PNSVTIATLLTARDVGPIHVP-----QVHCCASKLG-VLSDVYVATSLVTAYLRFGVLVS 55
PN +T+ TLL+A P +H A K G ++DV V T+L+ Y + G L
Sbjct: 85 PNHITLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDY 144
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEP 102
A VFD++ VRN+VS+N + G ++NG DV D ++ F+ P
Sbjct: 145 ARLVFDQMGVRNLVSWNTMIDGYMKNG------DV-DDALKLFDKLP 184
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 1 MPNSVTIATLLTA-RDVGPIHVP-QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+P+ VT+ +++A ++G + + VH K +V V SL+ Y R G + A +
Sbjct: 220 VPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQ 279
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VFD + RN+VS+N+ + G NG F+ M + EPN V+ S
Sbjct: 280 VFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKE-GLEPNGVSYTS 329
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 19/127 (14%)
Query: 2 PNSVTIATLLTA--RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PNSVT++++L A R + +H C K G D YV +L+ Y R G + A +
Sbjct: 388 PNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSI 447
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMR-----------------SFENEP 102
F + +++VS+N ++G + G ++ DM R +F +P
Sbjct: 448 FGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKP 507
Query: 103 NSVTLVS 109
NSVTL++
Sbjct: 508 NSVTLMT 514
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 2 PNSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PNSVT+ T+L A ++H A K + DV V ++LV Y + G L + V
Sbjct: 507 PNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTV 566
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFEN----EPNSVTLVS 109
F+++ VRNV+++N + +G +F+ M+ +N PN VT ++
Sbjct: 567 FEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIA 620
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 24 VHCCASKLGVL-SDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+H A K+G + V +S V+ Y R + A KVFDE+PVR+VV++ A + G +QNG
Sbjct: 132 LHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNG 191
Query: 83 APRLVFDVFKDMMRSFEN--EPNSVTL 107
+ + +M R ++ +PN+ TL
Sbjct: 192 ESEMGLECISEMYRVGDDSQKPNARTL 218
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 19 IHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGL 78
I+ QVHC K D +V+++L+ Y + G + A KVFD + V+++V+ NA +SG
Sbjct: 149 IYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGY 208
Query: 79 LQNGAPRLVFDVFKDMMRSFENEPNSVT 106
Q G P + ++M N PN VT
Sbjct: 209 AQQGLPNEALSLVENMKLMGVN-PNVVT 235
Score = 46.2 bits (108), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 2 PNSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P S TI+ LL A + ++H A +GV D+YV ++LV Y + G + A +
Sbjct: 301 PTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGFISEARTL 360
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
F ++P +N V+ N+ + G +G ++F M
Sbjct: 361 FYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQM 395
>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:9292413-9288471 | 20130731
Length = 1125
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 2 PNSVTIATLLTARDVGPIHVP---QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
P+S IA+++TA D Q+H K G++S+V+V TSL+ Y G + A K
Sbjct: 246 PSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANK 305
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
+F+E+ N+VS+ + M NG + V ++++ +
Sbjct: 306 LFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHL 341
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 41/74 (55%)
Query: 21 VPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQ 80
V VH KLG D++V SL+ Y R G + A KVF + R+VVS+N+ + GL++
Sbjct: 143 VKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVK 202
Query: 81 NGAPRLVFDVFKDM 94
NG VF +M
Sbjct: 203 NGDLDGALKVFDEM 216
>Medtr4g078750.1 | PPR containing plant-like protein | HC |
chr4:30434764-30433246 | 20130731
Length = 470
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 2 PNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
PN+ T LL + V +HC A K G+LSD +V T+L+ Y R +V A KVF+
Sbjct: 86 PNTHTFPPLL--KSSSAFVVTPLHCQALKRGILSDPFVLTTLLVVYARTNHIVCAQKVFE 143
Query: 62 ELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
E+P+ +V+ NA ++ NG VF+ M
Sbjct: 144 EVPMFCIVASNAMINAFTMNGNMEGALLVFEWM 176
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 2 PNSVTIATLLT---------ARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGV 52
PN T ++L+ A D G QVH GV V+V TSL+ Y + G
Sbjct: 220 PNEATYVSVLSSCTELEGKGALDFGR----QVHGYIVVKGVDLGVFVGTSLINLYGKMGC 275
Query: 53 LVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
L + VF + VR V ++NA +S L NG + D+F+ M+ +PNS+T V+
Sbjct: 276 LNYSASVFRVMVVREVCTWNAMISSLASNGREKEALDLFEK-MKLQGLKPNSITFVA 331
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ T+ +L +A ++G + + +VH K+G+ +++V SL+ Y + G + A +V
Sbjct: 239 PDGFTVVSLFSACAELGALELGRRVHVYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQV 298
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
F E+ RNVVS+ + + GL NG +FK+M R + P +T V
Sbjct: 299 FSEMSERNVVSWTSLVVGLAVNGFGEEALGLFKEMERQ-KIVPREITFV 346
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 37 VYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMR 96
+++ SL++ Y + G +AG VFD +PVR+ VS+N +SG L+NG F FK M
Sbjct: 77 LFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTE 136
Query: 97 S 97
S
Sbjct: 137 S 137
>Medtr8g063450.1 | PPR containing plant-like protein | HC |
chr8:26602939-26605163 | 20130731
Length = 699
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 20 HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSG 77
++ HC A K G +SD+Y + +L+TAY + L A ++FD++P R+ VS+NA +SG
Sbjct: 17 YLQATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISG 74
>Medtr5g024100.1 | PPR containing plant-like protein | HC |
chr5:9654442-9656866 | 20130731
Length = 754
Score = 53.5 bits (127), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 2 PNSVTIATLL---TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGV-LVSAG 57
PN T A LL T R++ + + Q+H + G+ + + +SLV YL+ G L A
Sbjct: 106 PNENTFAVLLRACTNRELWSVGL-QIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDAL 164
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+VF L R+VV++N +SG QNG R+V +F +M +P+ +T S
Sbjct: 165 RVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFAS 216
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H A K G DVY+ +S++ Y + G + + KVFDE N V++NA +SG +G
Sbjct: 534 QLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHG 593
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+ +V + ++ PN VT ++
Sbjct: 594 KAQQAIEVLSKLEKN-GVAPNHVTFLA 619
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 3 NSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
N T+ +L+TA +G +H + VH K G+ + Y+ATSL+ Y++ G + A VF
Sbjct: 234 NVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVF 293
Query: 61 DELPVR------NVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
DE V ++V + A + G Q G P+ ++F D + + PNSVTL S
Sbjct: 294 DEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTD-KKWYRILPNSVTLAS 347
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 1 MPNSVTIATLLTA--RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+PNSVT+A+LL+A + + +H K G L D + SLV Y + G++ A
Sbjct: 339 LPNSVTLASLLSACAQLENIVMGKLLHVLVVKYG-LDDTSLRNSLVDMYAKCGLIPDAHY 397
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM-MRSFENEPNSVTLV 108
VF ++VVS+N+ +SG Q+G+ D+F M M SF P++VT+V
Sbjct: 398 VFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESF--LPDAVTVV 446
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 4 SVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDEL 63
S+ + T RD+ + ++HC K +D +V TSLV AY + G L A KVFDE+
Sbjct: 139 SILLKTASQLRDI--VLTTKLHCNILKSNA-ADSFVLTSLVDAYSKCGKLRDARKVFDEI 195
Query: 64 PVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSF 98
P R+VVS+ + + +QN +F M F
Sbjct: 196 PDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGF 230
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 1 MPNSVTIATLLTA-RDVGPIHVP-QVHCCASKLGVLSD-VYVATSLVTAYLRFGVLVSAG 57
+P++VT+ +L+A VG + +H A K G++S +YV T+L+ Y + G SA
Sbjct: 439 LPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSAR 498
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VFD + +N V++ A + G G +F+DM++ E PN V +
Sbjct: 499 MVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKE-ELVPNEVVFTT 549
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH K G+ S++ V +L+ Y + G + A VF ++PV+++VS+N + G QN
Sbjct: 419 VHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLL 478
Query: 84 PRLVFDVFKDMMRSFENEPNSVTL 107
P ++F DM + F +P+ +T+
Sbjct: 479 PNEALELFLDMQKQF--KPDDITM 500
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
+VH KLG S+ V SL+ AY +FG + SA +FDEL +VVS+N+ ++G + NG
Sbjct: 216 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 275
Query: 83 APRLVFDVFKDMM 95
++F M+
Sbjct: 276 FSGNGLEIFIQML 288
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 20 HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLL 79
H QVH + D+YVA+ L+T Y++ G LV A +F+ ++VV +N+ ++G
Sbjct: 353 HGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYS 412
Query: 80 QNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
Q+G +VF DM S +P+ VT +
Sbjct: 413 QHGLGEEALNVFHDMCSS-GVQPDEVTFI 440
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 53.1 bits (126), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 2 PNSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P T+AT+L A+ ++HC K G+ D V SL++ Y + G++ +A
Sbjct: 310 PTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGF 369
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS 97
DE+ ++ VSY+A +SG +QNG +F+ M S
Sbjct: 370 LDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSS 407
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 53.1 bits (126), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ T+ ++TA D+ + + +H A + + +DVYVAT+L+ Y + G +A K+
Sbjct: 419 PDCFTLVAVITALADLSVNRMAKWIHGLAIRTFMDNDVYVATALIDMYAKCGATQTARKL 478
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD + R+V+++NA + G +G + D+F +M + PN T +S
Sbjct: 479 FDMMHERHVITWNAMIDGYGTHGLGKEAIDIFDNMQKE-AVIPNDTTFLS 527
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 53.1 bits (126), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 34 LSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKD 93
L D T+L+T Y+ G L A ++FDE+PV++VVS+NA +SG +Q+G F +
Sbjct: 194 LRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYE 253
Query: 94 MMRSFENEPNSVTLV 108
M + PN T+V
Sbjct: 254 MQEA-NVLPNKSTMV 267
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 53.1 bits (126), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH + SDV VA++L+ Y + ++ A +VFDE+ +RNVV++N + G +G
Sbjct: 291 QVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHG 350
Query: 83 APRLVFDVFKDMMR 96
V + K+M+R
Sbjct: 351 DGNEVMKLVKEMLR 364
Score = 46.6 bits (109), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+HC K+G D +V +LV Y + G + +A +VF ++ R++V +N +S + N
Sbjct: 188 QLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNS 247
Query: 83 APRLVFDVFKDM 94
P F VF M
Sbjct: 248 LPEEAFRVFNSM 259
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 53.1 bits (126), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 2 PNSVTIATLLTARD--VGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PNS T+A +L+ H Q+H A +L +S V V +L+T Y + G + A KV
Sbjct: 407 PNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVSSVSVGNALITMYSKSGCIKDARKV 466
Query: 60 FDELPV-RNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
F+++ R+ +++ + + L Q+G ++F+DM++ F +P+ +T V
Sbjct: 467 FNQICTERDTLTWTSMIIALAQHGLGNEAIELFEDMLK-FNLKPDHITYV 515
>Medtr7g082690.1 | PPR containing plant-like protein | HC |
chr7:31706993-31708834 | 20130731
Length = 503
Score = 52.8 bits (125), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVP-QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ T A+ LT + + + QVH + G D+ V SLV YL+ L K
Sbjct: 157 PDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKA 216
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FDE+P ++V S+ G LQ G PR+ V M+ +PN TL +
Sbjct: 217 FDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAK-MKKMGVKPNKFTLAT 265
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 2 PNSVTIATLLTA------RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVS 55
PN T+AT L A + G Q H KLG DV V +L+ Y + G + S
Sbjct: 258 PNKFTLATALNACACLASMEEGK----QFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDS 313
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
A VF R+VVS+ + QNG P +F D M+ EPN +T +
Sbjct: 314 AWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIF-DEMKETSVEPNYITFI 365
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 47 YLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVT 106
Y++ L SA ++FDE+P RNVVS+++ M+G + NG +F M R +PN T
Sbjct: 2 YIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFT 61
Query: 107 LVS 109
VS
Sbjct: 62 FVS 64
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 13 ARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYN 72
+RD + V Q H A++ GV+SDV + + + AY + + A +VFD+L R+VV++N
Sbjct: 53 SRDA--LKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWN 110
Query: 73 AFMSGLLQNGAPRLVFDVFKDM 94
+ + + G P+ +VF+ M
Sbjct: 111 SLSACYVNCGFPQQGLNVFRKM 132
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H A K G++ DV+V T+LV Y + A VFD +P RNVV++N+ S + G
Sbjct: 365 IHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGF 424
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
P+ +VF++M+ + +P+ VT++S
Sbjct: 425 PQKGLNVFREMVLN-GVKPDLVTMLS 449
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ VT++ +L+A D+ + + +H A K G++ +V+V+ +LV Y + A V
Sbjct: 240 PDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAV 299
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
FD +P RNV+++N+ S + G P+ +VF++M
Sbjct: 300 FDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREM 334
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH K G +++VYV +L+ Y + G L A KV + + ++ VS+N+ ++ + NG
Sbjct: 155 QVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANG 214
Query: 83 APRLVFDVFKDMMRSFENEPNSVT 106
D+ ++M+ S E EPN VT
Sbjct: 215 VVYEALDLLENMLLS-ELEPNVVT 237
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+HC A G +D V+ S+++ Y +F + SA +VFD +P R+ +++N+ ++ LQNG
Sbjct: 87 QLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNG 146
Query: 83 APRLVFDVFKD 93
+ KD
Sbjct: 147 LLVEALQMLKD 157
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN VTIA LL A VG + +VH + G ++V++A++L+ Y + G L A V
Sbjct: 285 PNQVTIAALLPACGSVGSVKWGREVHGFICRKGFDANVFIASALIDMYSKCGSLKDARNV 344
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTL 107
FD++ +NV S+NA + + G ++F M+ +PN VT
Sbjct: 345 FDKIQCKNVASWNAMIDCFGKCGMVDSALELFTK-MKEEGLQPNEVTF 391
>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:36572831-36570446 | 20130731
Length = 700
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 23 QVHCCASKLGVLS--DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQ 80
Q+HCC K G D +V+ SLVT Y + A KVF E +NVV + A ++G
Sbjct: 246 QIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGL 305
Query: 81 NGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
N +VF +MMR F PN + S
Sbjct: 306 NDKHVEALEVFSEMMR-FNVVPNESSFTS 333
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H K+G+ + VY SLV Y + G + A VF + +NVVS+N+ + G Q+G
Sbjct: 350 IHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGC 409
Query: 84 PRLVFDVFKDMMR 96
+FK+M+R
Sbjct: 410 GTWALVLFKEMLR 422
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 4 SVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDEL 63
+++I + AR H Q H + G +D+ ++LV Y ++G + +A VFD++
Sbjct: 327 TISIVITICARLASLEHGKQGHAALVRRGFGTDLVANSALVNFYSKWGRMENARHVFDKM 386
Query: 64 PVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFEN-EPNSVTLVS 109
+N++S+NA ++G +G ++F+ M++ EN PN VT ++
Sbjct: 387 HRKNIISWNALIAGYGHHGRGEEAIEMFEKMLQ--ENMTPNHVTFLA 431
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH G S V+V LV Y + G + A VFD L R +VS+ A +SG QNG
Sbjct: 167 VHAHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYGQNGE 226
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
P +F D MR + +P+ ++LVS
Sbjct: 227 PWEALRMF-DQMRKTDVKPDWISLVS 251
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H A G ++D+YV +++ Y++FGVL A KVFDE+P R+VV++ + ++G
Sbjct: 130 QLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSG 189
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN VT+A++L A ++G + + Q V A K G +++V +++ Y + G + A KV
Sbjct: 210 PNEVTLASVLPACANLGALEIGQRVEVYARKNGFFKNLFVCNAVLEMYAKCGKIDVAWKV 269
Query: 60 FDEL-PVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
FDE+ RN+ S+N+ + GL +G ++ M+R P+ VT V
Sbjct: 270 FDEIGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQMLRE-GTLPDDVTFV 318
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 55/141 (39%), Gaps = 33/141 (23%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T L T + + + Q +H K G DV+ +T+L+ Y + G L A V
Sbjct: 77 PNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTALLDMYAKLGCLKFARNV 136
Query: 60 FDE-------------------------------LPVRNVVSYNAFMSGLLQNGAPRLVF 88
FDE +P RNVVS+ +SG LQN
Sbjct: 137 FDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQNKQYEKAL 196
Query: 89 DVFKDMMRSFENEPNSVTLVS 109
+F M R + PN VTL S
Sbjct: 197 GLFMRMEREKDVSPNEVTLAS 217
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGP-IHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T+A++L + ++G ++ +H K G+ S V TSL+T Y + ++ + KV
Sbjct: 201 PNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKV 260
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F+ L + V++ +F+ GL+QNG + +F++M+R PN T S
Sbjct: 261 FNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRC-SISPNHFTFSS 309
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 1 MPNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGV-LSDVYVATSLVTAYLRFGVLVSAG 57
+P++ T + + A ++G Q H A LG +SD +VAT +V Y +FG + A
Sbjct: 98 LPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDAR 157
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VFD + ++VV + A + G Q G +VF+DM+ S +PN TL S
Sbjct: 158 FVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGS-RIKPNEYTLAS 208
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T +++L A + + Q+H KLGV + YV +L+ Y + G + A V
Sbjct: 302 PNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSV 361
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F+ L +VVS N + QNG ++F + M+ ++PN VT +S
Sbjct: 362 FESLTELDVVSINTMIYAYAQNGFGHEALELF-ERMKKLGHKPNVVTFIS 410
>Medtr5g044260.1 | PPR containing plant-like protein | HC |
chr5:19452918-19451090 | 20130731
Length = 565
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDEL-PVRNVVSYNAFMSGLLQN 81
QVH KLG D Y+ SL+ Y G L +A KVFD + RNVVS+N + +
Sbjct: 106 QVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKV 165
Query: 82 GAPRLVFDVFKDMMRSFENEPNSVTLVS 109
G +V +F +MM+ + EP+ T+ S
Sbjct: 166 GDYDIVLIMFCEMMKVY--EPDCYTMQS 191
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 33 VLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFK 92
V+ DV V T LV Y + G L A +VF+ + R+V S+N+ + G +G + D F
Sbjct: 220 VVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFV 279
Query: 93 DMMRSFENEPNSVTLV 108
M++ + PNS+T V
Sbjct: 280 RMVKVEKIVPNSITFV 295
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH + G++ DV+V +LV Y + G + A KVF+ + ++VV++NA ++G QNG
Sbjct: 136 QVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNG 195
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+F MR + E + VT S
Sbjct: 196 RFEDALSLFGK-MREEKIESDVVTWSS 221
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNV---VSYNAFMSGLLQ 80
+H C +LG S+V+V ++++ Y + +V A KVFDEL R + V++N+ +S
Sbjct: 32 IHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSH 91
Query: 81 NGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
P + +F++M + P++V +V+
Sbjct: 92 CFVPNVAVSLFREMTVGYGILPDTVGVVN 120
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 41/74 (55%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
+V TS+++ Y R G + A ++F +P +NVVS+ A + G NG R +F DMM
Sbjct: 226 NVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMM 285
Query: 96 RSFENEPNSVTLVS 109
+ +PN T VS
Sbjct: 286 TLSDAKPNEETFVS 299
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 41 TSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
TS++T Y + G + A +FD +P RN+V+YNA +S LQ+G R F DM
Sbjct: 76 TSMLTNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDDM 129
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 41 TSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG---APRLVFD 89
T++++ Y G + A KVFDE+P RNVVS+N+ + GL++NG R VFD
Sbjct: 138 TAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEEARKVFD 189
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQVHC-CASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN VT+ ++A + + + + C ++LGV S+ V +L+ Y++ G + + ++
Sbjct: 231 PNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREI 290
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FDE +N+V YN MS +Q+G V V +M++ + P+ VT++S
Sbjct: 291 FDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQ-RPDKVTMLS 339
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGL-LQN 81
QVH K+G++ D++VA SL+ Y G + KVFDE+ RNVVS+ + ++G + N
Sbjct: 153 QVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVN 212
Query: 82 GAPRLVFDVFKDMMRSFENEPNSVTLV 108
A V F+ M EPN VT+V
Sbjct: 213 MAKEAVCLFFE--MVEVGVEPNPVTMV 237
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 20 HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLL 79
H ++H ASKLG + D ++ T L+ Y ++ A +FD++ + V++N + G
Sbjct: 139 HGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYC 198
Query: 80 QNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
QNG +F+D MRS + +P+SV L +
Sbjct: 199 QNGHYDDALRLFED-MRSSDMKPDSVILCT 227
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 1 MPNSVTIATLLTA-RDVGPI-HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+P+ +T+ ++++A VG + +H + G + V +L+ Y + G LV A +
Sbjct: 351 VPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKARE 410
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
VF+ +P +NV+S+++ ++ +G +F+ M+ EPN VT +
Sbjct: 411 VFENMPRKNVISWSSMINAFAMHGNADSAIKLFR-RMKEVNIEPNGVTFI 459
>Medtr7g084830.1 | PPR containing plant-like protein | HC |
chr7:32742835-32744848 | 20130731
Length = 476
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 35/118 (29%)
Query: 25 HCCASKLGVLSDVYVATSLVTAYLRFGV--------------------------LVSAGK 58
H A K+G SDVYV +++ Y + G LV+ GK
Sbjct: 141 HGLAIKMGFWSDVYVQNNMMNLYFKIGGDVDDGWKVFDKMRVRNVVSWTTVIAGLVACGK 200
Query: 59 ------VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFEN-EPNSVTLVS 109
VF+ +P +NVVS+ A ++G ++N P FD+F+ M+ +N PN TLVS
Sbjct: 201 LDTAREVFERIPSKNVVSWTAMINGYVKNDNPIKAFDLFERML--IDNVRPNEFTLVS 256
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T+ +L+ A D+G + + ++H A K G ++ T+LV Y + G L +A KV
Sbjct: 249 PNEFTLVSLIKACTDLGSLKLGRRMHDFALKNGFELGPFLGTALVDMYSKCGSLDAAVKV 308
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
F + VRN+ ++N ++ +G V D+FK+M ++ P+++T V
Sbjct: 309 FGLMEVRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKA-GVVPDAITFV 356
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 1 MPNSVTIATLLTA-RDVGPIHVP-QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+PN+VT+A++L A +G + + Q+H + + + +VYV TSL Y + G + A
Sbjct: 525 IPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAEN 584
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VF P +N V+Y M Q+G + ++ M+RS P++VT V+
Sbjct: 585 VFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRS-GIRPDAVTFVA 634
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 28 ASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLV 87
A K+G+ DV+VA +LV Y +F + A +FD +PVR+VV +N M ++ GA V
Sbjct: 148 AVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEV 207
Query: 88 FDVFKDMMRS 97
+F RS
Sbjct: 208 LGLFSAFHRS 217
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 2 PNSVTIATL------LTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVS 55
P+ T ATL LTA + G Q+H KL D +V TSLV Y + G +
Sbjct: 599 PDEYTFATLVKACSLLTALEQGK----QIHANIMKLNCAFDPFVMTSLVDMYAKCGNIED 654
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
A +F + R+V +NA + GL Q+G + F + M+S P+ VT +
Sbjct: 655 AYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNE-MKSRGVTPDRVTFI 706
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 28 ASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLV 87
A K+G+ DV+VA +LV Y +F + A +FD +PVR+VV +N M ++ GA V
Sbjct: 148 AVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEV 207
Query: 88 FDVFKDMMRS 97
+F RS
Sbjct: 208 LGLFSAFHRS 217
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 2 PNSVTIATL------LTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVS 55
P+ T ATL LTA + G Q+H KL D +V TSLV Y + G +
Sbjct: 599 PDEYTFATLVKACSLLTALEQGK----QIHANIMKLNCAFDPFVMTSLVDMYAKCGNIED 654
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
A +F + R+V +NA + GL Q+G + F + M+S P+ VT +
Sbjct: 655 AYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNE-MKSRGVTPDRVTFI 706
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 2 PNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
PNS T TL+ + V + QV K G SDVY +S++ + + G + A +VFD
Sbjct: 106 PNSHTFTTLVKSC-VTLSSLEQVFTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFD 164
Query: 62 ELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
E RNVV + + +SG G V DVF M + NE ++ +VS
Sbjct: 165 ESSNRNVVCWTSLVSGYCSCGLVNEVRDVFDKMPQ--RNEASNSAMVS 210
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 28 ASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLV 87
A K+G+ DV+VA +LV Y +F + A +FD +PVR+VV +N M ++ GA V
Sbjct: 148 AVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEV 207
Query: 88 FDVFKDMMRS 97
+F RS
Sbjct: 208 LGLFSAFHRS 217
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 2 PNSVTIATL------LTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVS 55
P+ T ATL LTA + G Q+H KL D +V TSLV Y + G +
Sbjct: 599 PDEYTFATLVKACSLLTALEQGK----QIHANIMKLNCAFDPFVMTSLVDMYAKCGNIED 654
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
A +F + R+V +NA + GL Q+G + F + M+S P+ VT +
Sbjct: 655 AYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNE-MKSRGVTPDRVTFI 706
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 39/65 (60%)
Query: 30 KLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFD 89
+L V V T++V+ Y++ + A ++F+E+PVRNVVS+N + G +NG + D
Sbjct: 57 RLDAEKSVIVWTAMVSGYIKINRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEAMD 116
Query: 90 VFKDM 94
+F M
Sbjct: 117 LFGRM 121
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K+ + D+ + SL++ Y + G + A K+F ++ NVVSYN+ ++G QNG
Sbjct: 441 QIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVINGFAQNG 500
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
++K M EPN VT ++
Sbjct: 501 FGEEALSMYKRMQNE-SLEPNRVTFLA 526
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 20 HVP-QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGL 78
H+P V+ KLG D +V ++A+ G + +A KVFDE P R++V++ A ++G
Sbjct: 123 HLPFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALINGF 182
Query: 79 LQNGAPRLVFDVFKDM 94
++NG P F +M
Sbjct: 183 VKNGVPGEALRCFVEM 198
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 20 HVP-QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGL 78
H+P V+ KLG D +V ++A+ G + +A KVFDE P R++V++ A ++G
Sbjct: 123 HLPFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALINGF 182
Query: 79 LQNGAPRLVFDVFKDM 94
++NG P F +M
Sbjct: 183 VKNGVPGEALRCFVEM 198
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
D Y +++ AY+ G +V A ++FDE+ R+VVS++ ++G +Q G D F M+
Sbjct: 176 DFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKML 235
Query: 96 RSFENEPNSVTLVS 109
+S E +PN T+VS
Sbjct: 236 QS-EVKPNEYTMVS 248
>Medtr7g108530.1 | PPR containing plant-like protein | HC |
chr7:44212645-44210679 | 20130731
Length = 467
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 30 KLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFD 89
KLG ++D+YV SL+ Y +G L ++FDE+P R+VVS+ + G G
Sbjct: 137 KLGYVNDIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALL 196
Query: 90 VFKDMMRSFENEPNSVTLVS 109
VF+ M PN VT+V+
Sbjct: 197 VFEQMQYG-GVVPNRVTMVN 215
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 37 VYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
V V T++V+ Y++ + A ++F+E+PVRNVVS+N + G +NG + D+F M
Sbjct: 108 VIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRM 165
Score = 48.9 bits (115), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
DV T++V + G + +A +VFD++P+RNVVS+NA ++G QNG F + +
Sbjct: 200 DVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGR-------FDEAL 252
Query: 96 RSFENEP 102
+ FE P
Sbjct: 253 KLFERMP 259
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 2 PNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
P++ T +LL+A D + V +H K G L+ V V +L+++Y R G + A ++F
Sbjct: 388 PDAFTYGSLLSASDSLQM-VEMIHSVLCKNG-LNKVEVLNALISSYSRNGQIKRAFQIFS 445
Query: 62 ELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTL 107
+L ++++S+N+ +SG + NG P + F ++ + +PN+ +L
Sbjct: 446 DLAYKSLISWNSIISGFVLNGYPMQGLEKFSALLNT-HLKPNAYSL 490
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 3 NSVTIATLLTA--RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
++ T AT+L+ G + VH K G L V SL+T Y G +V KVF
Sbjct: 186 DNYTFATMLSLCPLSEGLDYGRHVHSVVVKSGFLDWTSVVNSLITMYFNCGCVVDGYKVF 245
Query: 61 DELP--VRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMR 96
+E+ VRN V+YNA + G + F +F+DM R
Sbjct: 246 EEMEGGVRNHVTYNAMIDGFVSVERFEDAFLMFRDMHR 283
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 4 SVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDEL 63
++T ++L + D G Q+H +LG S + +L+T Y R GV+ SA VF +
Sbjct: 429 AITACSVLGSLDNGQ----QIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTM 484
Query: 64 PVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
P + VS+NA ++ L Q+G ++F+ MM+ + P+ +T ++
Sbjct: 485 PYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKE-DILPDRITFLT 529
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 50.8 bits (120), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 10/114 (8%)
Query: 2 PNSVTIATL------LTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVS 55
PN T A++ L A ++G QV K + + + ++L+ Y + G ++
Sbjct: 273 PNLSTFASIIGACSVLAAFEIGE----QVQAQLMKTPFFAVIKLGSALIDMYSKCGRVID 328
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
A +VFD + +NV S+ + + G +NG P ++FK M + PN VT +S
Sbjct: 329 AQRVFDHMLEKNVFSWTSMIDGYGKNGFPDEALELFKKMQIEYSITPNFVTFLS 382
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 2 PNSVTIATLLTA-RDVGPI-HVPQVHCCASKLG-VLSDVYVATSLVTAYLRFGVLVSAGK 58
PN + T+LTA +G + VH A + V S+ +AT+LV Y + G + SA
Sbjct: 245 PNDSVLVTVLTACAHLGALTQGMWVHSYARRFDRVSSNPILATALVDMYSKCGCVESALS 304
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VFD + ++V ++NA +SG+ NG R ++F+ M+ N+PN T V+
Sbjct: 305 VFDGISDKDVGAWNAMISGVALNGDARKSLELFQQMIVC-GNKPNETTFVA 354
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 35 SDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
DV + T+++ Y + G + SA ++FDE+P RNVVS++A M+ + R V D+F +
Sbjct: 179 KDVVLWTAMIDGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYSRVSEFREVLDLFLE- 237
Query: 95 MRSFENEPNSVTLVS 109
M+S PN LV+
Sbjct: 238 MQSEGVRPNDSVLVT 252
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 2 PNSVTIATLLTARDV--GPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+S T +LL A + +HC KLG L + VA+ LV Y + G L A ++
Sbjct: 415 PDSPTFNSLLPAYAILADLKQAMNMHCYLVKLGFLCKLEVASMLVDIYSKCGTLGYAHQI 474
Query: 60 FDELPV--RNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
FD +P+ ++++ + A + ++G + +F M++S E +PN VT S
Sbjct: 475 FDMIPLKDKDIIIWTAIIDAYGKHGYGEMAVSLFNQMVQSGE-KPNEVTFTS 525
>Medtr4g006900.1 | PPR containing plant-like protein | HC |
chr4:850780-853131 | 20130731
Length = 688
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 2 PNSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ VT+AT+L A+ Q+H A K L +V +++SLV Y + GV+ + ++
Sbjct: 420 PDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNVSLSSSLVVMYSKCGVVEYSTRL 479
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTL 107
F ++ RNV+S+ A + ++NG V + M S ++ P+SV +
Sbjct: 480 FGDMEQRNVISWTAMIDSYIENGHLYEALGVIRSMQLS-KHRPDSVAM 526
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K G S+VY SL+ Y G + SA +FD LP R++VS+N + G ++ G
Sbjct: 132 QIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCG 191
Query: 83 APRLVFDVFKDM 94
+ + +F+ M
Sbjct: 192 NVEMAYKIFQAM 203
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 2 PNSVTIATLLTARDVGPIHV--PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN TI+TLL A + V QVH A LG +V+V +SL+ AY + G+
Sbjct: 104 PNDYTISTLLRAVISTELDVLVRQVHALAFHLGHYLNVFVGSSLIRAYAGLKEEEALGRA 163
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPN 103
F+++ +++V S+NA +S ++ G F D +F+ P
Sbjct: 164 FNDISMKDVTSWNALVSSYMELGK-------FVDAQTAFDQMPQ 200
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 2 PNSVTIATLLTA--RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T +++L A I Q+H C K G+ +DV TSLV Y + G + +A V
Sbjct: 267 PNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGV 326
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F+ + +N+VS+NA + G +G + F D M+ P+ VT V+
Sbjct: 327 FESIRDKNLVSWNAIIGGYASHGLATRALEEF-DRMKVV-GTPDEVTFVN 374
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 2 PNSVTIATLLTARD--VGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN +TI+++L A V Q+H K+ + D+ + SL++ Y + G + A K+
Sbjct: 284 PNPLTISSVLAASASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKI 343
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F ++ NVVS N+ ++G QNG +++K M++ EPN VT ++
Sbjct: 344 FVDVVELNVVSNNSVINGFTQNGFGEEALNMYK-RMQNESLEPNRVTFLA 392
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 43 LVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS--FEN 100
++T Y++ G + SA +FDE PV++VVS+NA ++G + G + ++F +M R+ F
Sbjct: 211 MITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVF-- 268
Query: 101 EPNSVTLVS 109
P+ VTL+S
Sbjct: 269 -PDEVTLLS 276
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+HC A KLGV ++YV +L+ Y G + ++ +VFD++ VV+YNA + L +N
Sbjct: 133 QLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNN 192
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLV 108
+F++ ++ +P VT++
Sbjct: 193 RANEALALFRE-LQEIGLKPTDVTML 217
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H K G+ D++V + V Y + + ++ KVFDE+ R++VS+N+ MSG + NG
Sbjct: 142 IHGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGY 201
Query: 84 PRLVFDVFKDMMRSFE-NEPNSVTLVS 109
+F DM+R P++ TLV+
Sbjct: 202 VDEAVMLFCDMLRDDGIGFPDNATLVT 228
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 13/115 (11%)
Query: 2 PNSVTIATLL-TARDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN +T+ ++L +G + ++HC A++ G+ ++ V SL+ Y + G L KV
Sbjct: 438 PNHITLVSVLPICTQIGALRQGKEIHCYATRSGLGLNISVGNSLIDMYSKCGFLELGVKV 497
Query: 60 FDELPVRNVVSYNAFMS-----GLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F+++ V+N ++YN +S GL + G F + M +PN VT +S
Sbjct: 498 FNQMMVKNTITYNTMISACGAHGLGEKGLK------FYEQMNEAGMKPNKVTFIS 546
>Medtr2g094420.1 | PPR containing plant-like protein | HC |
chr2:40258178-40258792 | 20130731
Length = 204
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQV-HCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+S T + +L A + H+ + H K G DV+V T++V Y + G L A K+
Sbjct: 28 PDSFTFSFVLKACARLNLFHLGMMMHSLVFKTGFDCDVFVKTNVVCFYSKCGFLKDAWKM 87
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS 97
FD++ V+N+VS+ + G ++ G R +F+ ++ S
Sbjct: 88 FDDMVVKNIVSWTGMICGCIEFGKFREAVYLFRGLLES 125
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
DV+ T++V+ Y++ G+L A FDE+P +N VSYNA ++G +Q + ++F+ M
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESM 323
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 10 LLTARDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNV 68
L T D+ + + Q+H A K+G + +V +L+ Y + G + A F+ + ++V
Sbjct: 401 LSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDV 460
Query: 69 VSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
VS+N ++G ++G R VF+ M++ +P+ +T+V
Sbjct: 461 VSWNTMLAGYARHGFGRQALTVFES-MKTAGVKPDEITMV 499
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 33 VLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFK 92
V SDV S++ +R G + A K+FDE+P R+VVS+++ + G +QNG + F+
Sbjct: 176 VCSDVVTWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLEDGLECFR 235
Query: 93 DMMRSFENEPNSVTLVS 109
+MR PN LV+
Sbjct: 236 -LMREKGIRPNESILVT 251
>Medtr2g028240.1 | PPR containing plant-like protein | HC |
chr2:10416867-10418417 | 20130731
Length = 516
Score = 50.1 bits (118), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 2 PNSVTIATLLT--ARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN+V + ++L + + + QVHC A + G + + L+ Y + G ++ A V
Sbjct: 253 PNAVALTSVLVCCSEESDLLTGKQVHCVAVRQGFTFETQLCNVLLDMYAKCGKILQAWSV 312
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS-FENEPNSVTLVS 109
FD + ++V+S+ + G +NG ++F MM E PNSVT +S
Sbjct: 313 FDGIFQKDVISWTCMIDGYGRNGCGYEAVELFWKMMEDGSEVLPNSVTFLS 363
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 3 NSVTIATLLTARDVGPIHVP---QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
N+ T + L A + GP + +H K +DVYV+ +L+ Y G + A +V
Sbjct: 250 NTYTFVSALQACE-GPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERV 308
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
F + ++ VS+N +SG++QN + F+DM S + +P+ V++++
Sbjct: 309 FKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQ-KPDQVSVLN 357
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 3 NSVTIATLLT--ARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
N TI+++L A + Q+H + K+ V S+ +V T+L+ Y + + A K+F
Sbjct: 156 NEFTISSVLCECAFKCAILECMQLHAFSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMF 215
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKD-MMRSFENE 101
+ +P N V++++ ++G +QNG +F+D + FE +
Sbjct: 216 ESMPETNAVTWSSILAGYVQNGLHEAALLLFRDYQLMGFEQD 257
>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21517672-21518970 | 20130731
Length = 432
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 5 VTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELP 64
+T + L A D+G QVH + + S V + SL+ Y + G L + ++FD +
Sbjct: 65 LTALSGLAALDLGK----QVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMY 120
Query: 65 VRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
R V+S+NA + G ++G R V +F M + +P+SVT+++
Sbjct: 121 ERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILA 165
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K D+YV TSLV Y++FG + A KVFDE+ VR++VS+ A + G + G
Sbjct: 144 QIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCG 203
Query: 83 ---APRLVFDVFKD 93
R +FD D
Sbjct: 204 DMVEARKLFDGMVD 217
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 3 NSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
N VT+ ++L A D+ + + VH + + V+V +LV Y + G + A VF
Sbjct: 317 NEVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVF 376
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+E+ ++ S+NA ++G NG + +VF M+R EPN +T+ S
Sbjct: 377 EEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLRE-GFEPNQITMTS 424
Score = 46.6 bits (109), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 34 LSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKD 93
+ +V TS+V Y G + A +FD +P +NV+S+NA + G QNG +F +
Sbjct: 248 VKNVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCE 307
Query: 94 MMRSFENEPNSVTLVS 109
M + + E N VT+VS
Sbjct: 308 MRGNVDVEMNEVTVVS 323
>Medtr5g043920.1 | PPR containing plant-like protein | HC |
chr5:19295539-19293687 | 20130731
Length = 498
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 22 PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQN 81
QVH K G+ SDVYV +++ Y +V A KVFDE+ VR +VS+N+ M+ ++N
Sbjct: 131 KQVHADLVKFGLDSDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIVSWNSVMTACVEN 190
Query: 82 -GAPRLVFDVFKDMMRSFENEPNSVTLV 108
+ FK MR EP+ ++V
Sbjct: 191 VWLSDGIGYFFK--MRDCAFEPDETSMV 216
>Medtr8g065040.1 | PPR containing plant-like protein | HC |
chr8:27316294-27314321 | 20130731
Length = 657
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 1 MPNSVTIATLLTARDVGP----IHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSA 56
MP+ VT++T L A V +HC A K GV D V SL+ AY R G +
Sbjct: 405 MPDEVTVSTTLKALSVSASASFTSSQSLHCFALKSGVEGDTTVLCSLMDAYSRCGHWELS 464
Query: 57 GKVFDELPVRNVVSYNAFMSGLLQNGAPR 85
++F+ +P N + + + ++G +NG +
Sbjct: 465 HRIFETIPTPNAICFTSMINGYARNGMGK 493
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H K G D++V +L+ Y + G ++ AG+VFD++ VR+ V +N+ ++ QNG
Sbjct: 170 IHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGH 229
Query: 84 PRLVFDVFKDMMRSFENEPNSVTLVS 109
P + ++M + P TLV+
Sbjct: 230 PDESISLCREMAAN-GVRPTEATLVT 254
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 49.3 bits (116), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 1 MPNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
MPN T +++L A + + QVH K G+ SDV+V ++L+ AY + G L+ A VF
Sbjct: 182 MPNMYTFSSVLRACE-RLCDLKQVHSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVF 240
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRS-FENEPNSVTLV 108
E+ + V +N+ ++ Q+ ++K M R F + +++T V
Sbjct: 241 REMVTGDSVVWNSIIAAFAQHSDGDEALALYKSMRREGFPADQSTLTSV 289
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 19/118 (16%)
Query: 2 PNSVTIATL------LTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVS 55
P+S T ++ L+A +G I H S G S+ +V ++V Y + L
Sbjct: 114 PSSYTFTSVFKACAHLSALKIGTIL--HSHVFVSGFG--SNSFVQAAIVAFYAKSSALCV 169
Query: 56 AGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENE----PNSVTLVS 109
A KVFD++P R+VV++N +SG NG +F+ M NE P+S T VS
Sbjct: 170 ARKVFDKMPQRSVVAWNTMISGYEHNGLANEAMTLFRKM-----NEMGVCPDSATFVS 222
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 48.9 bits (115), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 6 TIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDEL 63
T+AT+++A + G + Q+H K+G+ D YV +SL+ Y + G L A +F+++
Sbjct: 385 TVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQI 444
Query: 64 PVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
NVV + + +SG +G + +F+ M+ + PN VT V
Sbjct: 445 KEPNVVLWTSMISGCALHGQGKEAISLFEGML-NLGIIPNEVTFV 488
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 22 PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQN 81
P C + V D TS+V Y R + A KVF+E+PV+ VS+ A +SG ++N
Sbjct: 196 PNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFVKN 255
Query: 82 GAPRLVFDVFKDMMR 96
G +VF M++
Sbjct: 256 GRCYEALEVFHQMIK 270
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 34 LSD--VYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG---APRLVF 88
LSD V T++V Y+ G +V A KVFDE+P+RNV S+NA + G ++ G + R VF
Sbjct: 176 LSDRNVVSWTAMVVGYVTAGDVVEAKKVFDEMPLRNVASWNAMIRGFVKVGDLSSARGVF 235
Query: 89 D 89
D
Sbjct: 236 D 236
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH + G+ D++V T+LV Y + G + A KVFDEL RNVVS+ A + G + G
Sbjct: 137 VHGSVFRCGLDQDLFVGTTLVDMYGKCGEIGDARKVFDELSDRNVVSWTAMVVGYVTAGD 196
Query: 84 PRLVFDVFKDM 94
VF +M
Sbjct: 197 VVEAKKVFDEM 207
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
++H + G SDV V +L+T Y + G + +A VFD++P ++ +S+NA ++G +NG
Sbjct: 221 EIHVHVLRFGFESDVDVINALITMYAKCGDIDTARLVFDKMPKKDRISWNAMIAGCFENG 280
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+F M+ + +P+ +T+ S
Sbjct: 281 ECLEGLTLFCRMIE-YPVDPDLMTMTS 306
>Medtr5g025200.1 | PPR repeat protein | HC | chr5:10223562-10224998
| 20130731
Length = 418
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD-ELPVRNVVSYNAFMSGLLQN 81
QVH A KLG+ SD YV SL+ Y R G+L A VF+ RNV S NA + G +QN
Sbjct: 318 QVHADAIKLGLDSDSYVQCSLIAMYGRSGLLRDAELVFEMTRNERNVDSLNAMLMGYIQN 377
Query: 82 G 82
G
Sbjct: 378 G 378
>Medtr5g031630.1 | PPR containing plant-like protein, putative | HC
| chr5:13562181-13560603 | 20130731
Length = 504
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 2 PNSVTIATLLTA-RDVGP-IHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T+A++L + ++G ++ +H K G+ S + TSL+T Y + ++ + KV
Sbjct: 88 PNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVIASQTSLLTMYSKCSMVEDSIKV 147
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVT 106
F++L + V+ +F+ GL+QNG + +F++M+R PN T
Sbjct: 148 FNQLSYASHVTCTSFIVGLVQNGREEVALSMFREMIRC-SISPNHFT 193
Score = 46.6 bits (109), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 23 QVHCCASKLGV-LSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQN 81
+ H A LG +SD +VAT +V Y +FG + A VFD + ++VV + A + G Q+
Sbjct: 9 KAHGLAVVLGFEVSDGFVATGIVDMYTKFGKMKDAQFVFDRVLDKDVVLFTALIVGYNQH 68
Query: 82 GAPRLVFDVFKDMMRSFENEPNSVTLVS 109
G +VF++M+ +PN TL S
Sbjct: 69 GLDGEALEVFEEMV-GRRVKPNEYTLAS 95
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 2 PNSVTIA-TLLTARDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ T A +L + ++ + V Q+H K G ++D++V+ +L+ Y + G + SA KV
Sbjct: 454 PDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKV 513
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
F ++ +++S+N+ +SG NG F F + M S P+ VT +
Sbjct: 514 FKDIEGVDLISWNSLISGYALNGYANEAFWAF-EQMSSEGTVPDEVTFI 561
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
DV SL+ Y++ G + SA ++FD++PVR +VS+ ++G + G DVF++ M
Sbjct: 176 DVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFRE-M 234
Query: 96 RSFENEPNSVTLVS 109
+ EP+ +++++
Sbjct: 235 QMVGIEPDEISIIA 248
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH K G +L+ Y +FG L +A KVF+E+ R+V+S+N+ + G ++ G
Sbjct: 132 QVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLG 191
Query: 83 APRLVFDVFKDM 94
++F DM
Sbjct: 192 QMNSARELFDDM 203
Score = 45.8 bits (107), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ ++I +L A +G + V + +H A K G L + +L+ Y + G + A +
Sbjct: 241 PDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNL 300
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
FD+L ++V+S++ + GL +G +F++M + PN +T +
Sbjct: 301 FDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCK-VRVAPNEITFL 348
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 36 DVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMM 95
DV SL+ Y++ G + SA ++FD++PVR +VS+ ++G + G DVF++ M
Sbjct: 176 DVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFRE-M 234
Query: 96 RSFENEPNSVTLVS 109
+ EP+ +++++
Sbjct: 235 QMVGIEPDEISIIA 248
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
QVH K G +L+ Y +FG L +A KVF+E+ R+V+S+N+ + G ++ G
Sbjct: 132 QVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLG 191
Query: 83 APRLVFDVFKDM 94
++F DM
Sbjct: 192 QMNSARELFDDM 203
Score = 45.8 bits (107), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
P+ ++I +L A +G + V + +H A K G L + +L+ Y + G + A +
Sbjct: 241 PDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNL 300
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
FD+L ++V+S++ + GL +G +F++M + PN +T +
Sbjct: 301 FDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCK-VRVAPNEITFL 348
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 48.5 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 2 PNSVTIATLL--TARDVGPIHVPQVHCCASKLGVLSDVYVA--TSLVTAYLRFGVLVSAG 57
PN VTIA++L AR H + HC K Y+ SLV Y R G ++ A
Sbjct: 427 PNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEAR 486
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
KVFD L ++ V+Y + + G +G +F + MR +P+ VT+V+
Sbjct: 487 KVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAE-MRRLNIKPDHVTMVA 537
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H A K G+ ++ VA +++ Y + G L+ A +FD++ +++ VS+NA ++ QN
Sbjct: 393 QLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNE 452
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+F M+RS EP+ T S
Sbjct: 453 HVEETLALFVSMLRS-TMEPDDYTFGS 478
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H A K G+ ++ VA +++ Y + G L+ A +FD++ +++ VS+NA ++ QN
Sbjct: 393 QLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNE 452
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
+F M+RS EP+ T S
Sbjct: 453 HVEETLALFVSMLRS-TMEPDDYTFGS 478
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 14 RDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNA 73
R++G QVHC LG S ++++ +LV Y + +V+A +F E+ ++VVS+ +
Sbjct: 260 RELGK----QVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTS 315
Query: 74 FMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
+ G Q+G ++ DM+ + +PN VT V
Sbjct: 316 IIVGTAQHGLAEEALTLYDDMVLA-GVKPNEVTFV 349
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 PNSVTIATLLTA-RDVGPI-HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN T A ++TA ++ + H Q H K+G D +VA +LV Y + G + A K
Sbjct: 543 PNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKA 602
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
F ++ +N+ ++ Q+G VF+DM+ +PN VT V
Sbjct: 603 FISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIME-GLKPNYVTFV 650
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+HC + G++ DV + + Y + + K+FD + +NVVS+ ++G +QN
Sbjct: 263 QIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNS 322
Query: 83 APRLVFDVFKDMMR 96
R D+F +M R
Sbjct: 323 FHRDALDLFVEMAR 336
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 3 NSVTIATLLTA-RDVGPIHVPQV---HCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+ V + T++ A +G +H + + C + L + DV + T+++ Y + G + SA +
Sbjct: 200 DKVAMVTVVNACAKLGAMHRARFVNEYICGNGLSL--DVILGTAMIDMYAKCGCVDSARE 257
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VFD + +NV+S++A ++ +G + D+F MM S PN +T VS
Sbjct: 258 VFDRMKEKNVISWSAMIAAYGYHGKGKEALDLFH-MMLSCGISPNRITFVS 307
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H + K G+++ V+V+++LV Y++ G VF+ + RNVVS+ A + GL+ G
Sbjct: 173 LHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGC 232
Query: 84 PRLVFDVFKDMMRS 97
F +M RS
Sbjct: 233 SLDGLSYFSEMWRS 246
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 2 PNSVTIATLLTARDVGPIHVP--QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKV 59
PN +A++L+ + P QVH A +G+ + V ++L++ Y R G L A K+
Sbjct: 452 PNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKI 511
Query: 60 FDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
FD + ++VS+ A ++G ++G + +F++ + S P+ VT +
Sbjct: 512 FDSIKNNDIVSWTAMINGYAEHGYSQEAISLFEN-ISSVGLMPDYVTFI 559
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 48.1 bits (113), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 49/101 (48%)
Query: 3 NSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDE 62
N + IA R + +H K G + +++ ++++ Y + ++ A +FDE
Sbjct: 4 NHIQIAFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDE 63
Query: 63 LPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPN 103
+P RN+VS+ +S L + P ++ +M+ S +PN
Sbjct: 64 MPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPN 104
>Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1721493-1719058 | 20130731
Length = 774
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 3 NSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDE 62
++ +IA A V + +VH K G +D V+ +L+ AY R G L + +VF E
Sbjct: 402 HTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTE 461
Query: 63 LPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+ ++VS+N+ + +G + D+FK M + P+S T V+
Sbjct: 462 MGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM----DVHPDSATFVA 504
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 33 VLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFK 92
+ +D+++ +L+ Y + G L A +FD++P RN VS+ +SG Q G R F +F
Sbjct: 111 IQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFS 170
Query: 93 DMMRSFENEPNSVTLVS 109
M+ F PN S
Sbjct: 171 GMLACF--RPNEFAFAS 185
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 41/67 (61%)
Query: 40 ATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFE 99
ATS + + R G + A K+FDE+P R+ V++NA ++ + G + FD+F M R +
Sbjct: 8 ATSEIVSLARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISD 67
Query: 100 NEPNSVT 106
++P++ +
Sbjct: 68 SKPDNFS 74
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
+H +GV D+ +T+LV Y + + A K+F+ L ++ V YN M+G L+NG
Sbjct: 262 IHGYMITMGVELDLVASTALVDLYCKIDI-TKARKLFERLGNKDAVVYNVMMTGYLENGL 320
Query: 84 PRLVFDVFKDMMRSFENEPNSVTL 107
P +VF++M+++ N +V L
Sbjct: 321 PVEAVNVFREMVKT--NASTNVAL 342
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 3 NSVTIATLLTA-RDVGPIH-VPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
+SVT+ LL A +G + + +VHC + + D+ V SL+T Y + G L +A +F
Sbjct: 440 DSVTLIGLLQALSQLGCLSFIKEVHCFSYRFFHGKDLSVNNSLITTYAKCGKLCTARYIF 499
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
++ R + S+NA + +G V ++F D M++ + P+ VT S
Sbjct: 500 QQMTERCLTSWNAMIGAYAMHGNYTEVLELF-DHMKAGKVTPDEVTFTS 547
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 24 VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNGA 83
VH + KL SD +V +SL+ Y ++G + A KVFDE+ +++ +Y + ++ +G
Sbjct: 54 VHVDSIKLNFNSDCFVGSSLIRLYSQYGKIKDAHKVFDEITNKDIFAYTSMITAYGHSGG 113
Query: 84 PRLVFDVFKD--MMRSFENEPNSVTLVS 109
V+ F +M+ PN VTLVS
Sbjct: 114 -SCVYGAFNTAFIMQQQGMLPNRVTLVS 140
>Medtr3g037470.1 | TPR superfamily protein | HC |
chr3:13772234-13768538 | 20130731
Length = 424
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K G S + + TSL+ Y G L A +VFDE+P +N++ + + +S ++N
Sbjct: 97 QLHSLIIKFGYESIIQLQTSLLKVYAGGGNLFDAHQVFDEIPEKNIICWTSLISAYVENH 156
Query: 83 APRLVFDVFKDMMRSFENEPNSVTLVS 109
++F+ M+ + EP+ + L +
Sbjct: 157 KSNKGLELFRLMLMN-NVEPDQIVLTT 182
>Medtr3g088820.1 | PPR containing plant-like protein | HC |
chr3:40646143-40648516 | 20130731
Length = 698
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 3 NSVTIATLL-TARDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
N++T A++L + DV + + Q VH K G S+V + ++LV Y + G++V A ++F
Sbjct: 163 NNITFASVLGSCADVYELSLSQQVHGLVVKFGFSSNVIIGSALVDVYAKCGIMVYARRMF 222
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
E+P N V++N + L G + +F M
Sbjct: 223 HEIPRPNAVTWNVIVRRYLDVGDAKEAVLLFTRM 256
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 23 QVHCCASKLGV-LSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQN 81
QVH A K + + V V + V Y + G L A ++FD +P +N VS N+ ++G Q+
Sbjct: 368 QVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAGYAQH 427
Query: 82 GAPRLVFDVFKDMMRSFENEPNSVTLVS 109
GA +F+ M++ + PN++T +S
Sbjct: 428 GAEIESLQLFELMLQE-KIVPNNITFIS 454
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 2 PNSVTIATLL---TARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
P+ T LL TAR P Q+H K G SDVYV +L+ Y G +VSA K
Sbjct: 143 PDHYTYPILLRSCTARVSEP-EGKQIHDHVVKFGFDSDVYVRNTLINLYAVCGNMVSAHK 201
Query: 59 VFDELPVRNVVSYNAFMSGLLQNG 82
VF E V ++VS+N ++G + G
Sbjct: 202 VFKESVVLDLVSWNTLLAGYVNLG 225
Score = 45.8 bits (107), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 5 VTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELP 64
++ T + A D+G +H SK +V + T+LV Y++ G + +A +VF +
Sbjct: 447 ISACTHMAALDLGK----WIHAYISKNEFNVNVILGTTLVDMYMKCGCVENALEVFYAME 502
Query: 65 VRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
+ V ++NA + GL NG +VF DM ++ + PN +T +
Sbjct: 503 EKGVSTWNALILGLAMNGLVEKSLNVFADMKKT-KTLPNEITFM 545
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 2 PNSVTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFD 61
P +T + + AR G QVH K G S+VYV ++LV Y + G L +A + +
Sbjct: 240 PTILTACSSVLARCFGE----QVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLE 295
Query: 62 ELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDM 94
+ +VVS+N+ M G +++G +FK+M
Sbjct: 296 TMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNM 328
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 1 MPNSVTIATLLTARDVGPIHVPQV--HCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+PN TI +L A + V H + KLG+ S V +++ Y+ G++ SA +
Sbjct: 131 LPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARR 190
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLV 108
VFD++ R +VS+N+ ++G + G +F++ M+ EP+ TLV
Sbjct: 191 VFDDISERTLVSWNSMINGYSKMGRSEEAVLMFRE-MQEVGLEPDVFTLV 239
>Medtr1g012380.1 | PPR containing plant-like protein | HC |
chr1:2444546-2447496 | 20130731
Length = 600
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 2 PNSVTIATLLTA-RDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGV--LVSAG 57
PN T +L +G + + + VH C K G DV+V +L+ Y G A
Sbjct: 123 PNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAE 182
Query: 58 KVFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
KVFD+ P + V+++A ++G ++ G D+F++ M+ P+ +T+VS
Sbjct: 183 KVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFRE-MQVMGVCPDEITMVS 233
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 3 NSVTIATLLT-ARDVGPI-HVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVF 60
+S T A+LL+ A +G I Q+H K+G +D+ V +L++ Y + G +A +VF
Sbjct: 466 SSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVF 525
Query: 61 DELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
+++ NV+++ + ++G ++G ++F +M+ + +PN VT ++
Sbjct: 526 NDMEDCNVITWTSIINGFAKHGFASKALELFYNMLET-GVKPNDVTYIA 573
>Medtr3g117620.1 | PPR containing plant-like protein | HC |
chr3:55081139-55078984 | 20130731
Length = 493
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 23 QVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGKVFDELPVRNVVSYNAFMSGLLQNG 82
Q+H K G S V+V ++L+ Y + + A VFDE+P RN V NA +SG + G
Sbjct: 124 QIHAHVEKSGWSSSVFVGSALIDFYSKLLNVKDAALVFDEIPDRNTVCANALLSGYCEFG 183
Query: 83 APRLVFDVFKDM 94
F++ + M
Sbjct: 184 LWVKAFELIRKM 195
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 1 MPNSVTIATLL-TARDVGPIHVPQ-VHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+P+ T+ ++ + +G + + + VHC + G + V+V LV Y + + A K
Sbjct: 123 LPDGFTLPLIIKSCSKIGSVGLCKIVHCHVLETGFKNHVHVVNELVGMYGKVRRMEDACK 182
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFEN-EPNSVTLVS 109
VFD + VR+V+S+N +SG N F VFK M E EPN VT S
Sbjct: 183 VFDGMVVRSVLSWNTLVSGYAFNFDYVGAFRVFKRM--ELEGLEPNYVTWTS 232
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 1 MPNSVTIATLLTA-RDVGPIHV-PQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK 58
+P+ V I T+++A +G + +VH G DVY+ +SL+ Y + G L +
Sbjct: 240 VPDEVAITTVISACAHLGALGFGKEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLERSLL 299
Query: 59 VFDELPVRNVVSYNAFMSGLLQNGAPRLVFDVFKDMMRSFENEPNSVTLVS 109
VF +L +N+ +N+ + GL +G + +F +M R PN VT VS
Sbjct: 300 VFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEMERE-GIRPNRVTFVS 349
>Medtr5g025580.1 | PPR containing plant-like protein | HC |
chr5:10385696-10382561 | 20130731
Length = 767
Score = 45.8 bits (107), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 5 VTIATLLTARDVGPIHVPQVHCCASKLGVLSDVYVATSLVTAYLRFGVLVSAGK--VFDE 62
+ ++TL ++ G V +HC + K G+L D+ + +L+ Y + G + S+ +F+E
Sbjct: 15 LVVSTLSHLKNFGQGRV--IHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSECLFEE 72
Query: 63 LPVRNVVSYNAFMSGLLQNG 82
+ ++VVS+N+ M G L NG
Sbjct: 73 MEYKDVVSWNSIMRGCLYNG 92