Miyakogusa Predicted Gene

Lj0g3v0113449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0113449.1 Non Characterized Hit- tr|I3T5E9|I3T5E9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.6,0,HTH_CROC1,Helix-turn-helix type 3; no description,Lambda
repressor-like, DNA-binding domain; lambda ,CUFF.6770.1
         (143 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g084220.1 | multiprotein bridging factor 1b-like protein |...   265   8e-72
Medtr4g080090.1 | multiprotein bridging factor 1b-like protein |...   240   4e-64
Medtr6g018330.1 | multiprotein bridging factor 1b-like protein |...   188   2e-48
Medtr6g086280.2 | multiprotein bridging factor 1b-like protein |...   147   2e-36
Medtr6g086280.1 | multiprotein bridging factor 1b-like protein |...   147   3e-36
Medtr1g047000.1 | transcriptional coactivator multiprotein bridg...    80   7e-16
Medtr7g117675.1 | DNA-binding helix turn-helix protein | LC | ch...    79   1e-15
Medtr4g103930.1 | multiprotein bridging factor 1 | LC | chr4:429...    73   1e-13

>Medtr2g084220.1 | multiprotein bridging factor 1b-like protein | HC
           | chr2:35379970-35375982 | 20130731
          Length = 140

 Score =  265 bits (678), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 131/139 (94%), Positives = 134/139 (96%)

Query: 5   GGPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETVRKHNAGTNKAASSGTSLN 64
            GPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIET++KHNA TNKAASS TSLN
Sbjct: 2   AGPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETMKKHNAATNKAASSSTSLN 61

Query: 65  TKRLDEDTENLTHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPN 124
           TKRLDEDTENL HDRVPTELKKAIMQAR +KKLTQAQLAQIINEKPQVIQEYESGKAIPN
Sbjct: 62  TKRLDEDTENLAHDRVPTELKKAIMQARTEKKLTQAQLAQIINEKPQVIQEYESGKAIPN 121

Query: 125 QQIIGKLERALGAKLRGKK 143
           QQIIGKLERALGAKLRGKK
Sbjct: 122 QQIIGKLERALGAKLRGKK 140


>Medtr4g080090.1 | multiprotein bridging factor 1b-like protein | HC
           | chr4:31042066-31045251 | 20130731
          Length = 142

 Score =  240 bits (612), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 128/143 (89%), Positives = 135/143 (94%), Gaps = 1/143 (0%)

Query: 1   MSGAGGPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETVRKHNAGTNKAASSG 60
           MSG G  +SQDWEPVV+RKKAP AAA+KD+KAVNAARRAGADI+TV+KHNA TNKAASS 
Sbjct: 1   MSGLGH-ISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGADIDTVKKHNAATNKAASSS 59

Query: 61  TSLNTKRLDEDTENLTHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGK 120
           TSLNTKRLDEDTENL HDRVPTELKKAIMQARMDKKLTQ+QLAQIINEKPQVIQEYESGK
Sbjct: 60  TSLNTKRLDEDTENLAHDRVPTELKKAIMQARMDKKLTQSQLAQIINEKPQVIQEYESGK 119

Query: 121 AIPNQQIIGKLERALGAKLRGKK 143
           AIPNQQII KLERALGAKLRGKK
Sbjct: 120 AIPNQQIISKLERALGAKLRGKK 142


>Medtr6g018330.1 | multiprotein bridging factor 1b-like protein | HC
           | chr6:7016019-7016567 | 20130731
          Length = 143

 Score =  188 bits (477), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 101/137 (73%), Positives = 107/137 (78%), Gaps = 16/137 (11%)

Query: 7   PVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETVRKHNAGTNKAASSGTSLNTK 66
           P SQDWEPVVLRKKA TAAARKDDK VNAAR AGADI+T++K                  
Sbjct: 23  PGSQDWEPVVLRKKAHTAAARKDDKVVNAARGAGADIKTMKK----------------MM 66

Query: 67  RLDEDTENLTHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQ 126
            LDE  ENL +D+VPTELKKAIMQ RMDKKLTQAQLAQII+EKPQVIQEYESGKAIPNQ 
Sbjct: 67  LLDEYIENLVNDQVPTELKKAIMQTRMDKKLTQAQLAQIISEKPQVIQEYESGKAIPNQM 126

Query: 127 IIGKLERALGAKLRGKK 143
           IIGKLER LGAKL GKK
Sbjct: 127 IIGKLERVLGAKLPGKK 143


>Medtr6g086280.2 | multiprotein bridging factor 1b-like protein | HC
           | chr6:32389995-32393233 | 20130731
          Length = 149

 Score =  147 bits (372), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/137 (53%), Positives = 100/137 (72%)

Query: 6   GPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETVRKHNAGTNKAASSGTSLNT 65
           G + QDWEPVVL K  P A   ++ KAVN A R GA++ TV+K  AG+NK A++G  LN 
Sbjct: 10  GTIKQDWEPVVLHKTKPKAQDLRNPKAVNQALRTGAEVLTVKKPTAGSNKKATAGPVLNA 69

Query: 66  KRLDEDTENLTHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQ 125
           ++LDE  E    +RV  E++ AI +AR+DKK++Q  LA++INE+ QV+QEYE+GKA+ NQ
Sbjct: 70  RKLDEAAEPAALERVGGEVRHAIQKARLDKKMSQGDLAKLINERVQVVQEYENGKAVINQ 129

Query: 126 QIIGKLERALGAKLRGK 142
            ++GK+ER LG KLRGK
Sbjct: 130 GVLGKMERVLGVKLRGK 146


>Medtr6g086280.1 | multiprotein bridging factor 1b-like protein | HC
           | chr6:32390058-32393143 | 20130731
          Length = 151

 Score =  147 bits (372), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 73/137 (53%), Positives = 100/137 (72%)

Query: 6   GPVSQDWEPVVLRKKAPTAAARKDDKAVNAARRAGADIETVRKHNAGTNKAASSGTSLNT 65
           G + QDWEPVVL K  P A   ++ KAVN A R GA++ TV+K  AG+NK A++G  LN 
Sbjct: 10  GTIKQDWEPVVLHKTKPKAQDLRNPKAVNQALRTGAEVLTVKKPTAGSNKKATAGPVLNA 69

Query: 66  KRLDEDTENLTHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQ 125
           ++LDE  E    +RV  E++ AI +AR+DKK++Q  LA++INE+ QV+QEYE+GKA+ NQ
Sbjct: 70  RKLDEAAEPAALERVGGEVRHAIQKARLDKKMSQGDLAKLINERVQVVQEYENGKAVINQ 129

Query: 126 QIIGKLERALGAKLRGK 142
            ++GK+ER LG KLRGK
Sbjct: 130 GVLGKMERVLGVKLRGK 146


>Medtr1g047000.1 | transcriptional coactivator multiprotein bridging
           factor | HC | chr1:17726160-17725667 | 20130731
          Length = 56

 Score = 79.7 bits (195), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/41 (92%), Positives = 38/41 (92%)

Query: 103 AQIINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 143
            QIINEKPQVI EYESGKAIPNQ IIGKLERALGAKLRGKK
Sbjct: 16  VQIINEKPQVIHEYESGKAIPNQHIIGKLERALGAKLRGKK 56


>Medtr7g117675.1 | DNA-binding helix turn-helix protein | LC |
           chr7:48846113-48845627 | 20130731
          Length = 71

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/40 (95%), Positives = 39/40 (97%)

Query: 93  MDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQIIGKLE 132
           MDKKLTQAQLAQIINEKPQVI+EYESGKAIPNQ IIGKLE
Sbjct: 1   MDKKLTQAQLAQIINEKPQVIKEYESGKAIPNQMIIGKLE 40


>Medtr4g103930.1 | multiprotein bridging factor 1 | LC |
           chr4:42996228-42995339 | 20130731
          Length = 156

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 48/77 (62%), Gaps = 13/77 (16%)

Query: 33  VNAARRAGADIETVRKHNAGTNKAASSGTSLNTKRLDEDTENLTHDRVP----------- 81
           VNAARRAGADIETV+KHNA T+KAASS TSLNTKRLDE   +   +              
Sbjct: 45  VNAARRAGADIETVKKHNAATDKAASSSTSLNTKRLDEAWFSFVTNMFVLIYVIGPLMNN 104

Query: 82  --TELKKAIMQARMDKK 96
              E++KAI + RM  K
Sbjct: 105 PICEIEKAINKLRMKYK 121