Miyakogusa Predicted Gene

Lj0g3v0112959.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0112959.1 Non Characterized Hit- tr|I1N6V4|I1N6V4_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,40.94,0.000000000000002,coiled-coil,NULL,gene.g8529.t1.1
         (290 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g049530.1 | MADS-box protein AGL84 | LC | chr2:21819458-21...    78   9e-15
Medtr4g045977.1 | MADS-SRF-like domain protein | LC | chr4:15977...    77   2e-14
Medtr2g049630.1 | MADS-SRF-like domain protein | LC | chr2:21875...    73   3e-13
Medtr2g049610.1 | MADS-box transcription factor family protein |...    73   4e-13
Medtr6g005450.1 | MADS-box transcription factor family protein |...    66   4e-11
Medtr1g114730.1 | MADS-box transcription factor family protein |...    65   6e-11
Medtr6g005440.1 | MADS-box transcription factor family protein |...    63   3e-10
Medtr4g107170.1 | MADS-box transcription factor family protein |...    61   1e-09
Medtr6g018920.1 | MADS-box transcription factor family protein |...    60   2e-09
Medtr1g115290.1 | MADS-box protein, putative | LC | chr1:5199979...    56   5e-08

>Medtr2g049530.1 | MADS-box protein AGL84 | LC |
           chr2:21819458-21818880 | 20130731
          Length = 192

 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 45/70 (64%)

Query: 2   VEAEIARVKKEIFKMKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHRIDMLKKERQSE 61
           +E EI++V+KEI K KYPTWDPCF  +  EQL  F A ++AKIEACD RI MLK   Q +
Sbjct: 101 IEGEISKVQKEIVKNKYPTWDPCFINMDGEQLKAFTAIVNAKIEACDQRISMLKTMHQGD 160

Query: 62  AVVTAFDNMQ 71
                 D  Q
Sbjct: 161 QTSALHDTPQ 170


>Medtr4g045977.1 | MADS-SRF-like domain protein | LC |
           chr4:15977633-15978817 | 20130731
          Length = 394

 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 15/134 (11%)

Query: 2   VEAEIARVKKEIFKMKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHRIDMLKKERQSE 61
           VEA+I +V+K+  K KYPTW   F  +   QL  F+A ++ KI+ACDH+I MLK    + 
Sbjct: 99  VEAKITKVRKDTLKEKYPTWHQDFQNMEANQLRDFIATVNDKIQACDHKISMLK----NN 154

Query: 62  AVVTAFDNMQNMAQESAETSNHSQLNSMLNISEGQLVRASSMKSLNDNNVMVDSTYQVDA 121
           A+      MQNM QES  +S+  Q+N M + S  Q+      + +N  N MVD T  VD 
Sbjct: 155 AL------MQNMVQESVVSSHSRQVNVMHSNSIPQM-----QQHVNGTNEMVDLTNHVDL 203

Query: 122 TTATSFGSVQNMAQ 135
              +S   + ++++
Sbjct: 204 PHNSSTNQLHDISE 217


>Medtr2g049630.1 | MADS-SRF-like domain protein | LC |
           chr2:21875850-21876962 | 20130731
          Length = 370

 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 42/222 (18%)

Query: 2   VEAEIARVKKEIFKMKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHRIDMLKKERQSE 61
           +E+EI++V KEI    YPTW PCF  +  EQL  F+  L  KI+AC  RI MLKK ++S+
Sbjct: 101 IESEISKVHKEILMKMYPTWHPCFMNMNGEQLKTFIGILGGKIQACKKRISMLKKMQESD 160

Query: 62  AVVTAFDNMQNMAQESAETSNHSQLNSMLNISEGQLVRASSMKSLNDNNVMVDSTYQVDA 121
              T+F   QN             LNS +++                          V +
Sbjct: 161 E--TSF--TQNTV---------DPLNSPVSLPP------------------------VLS 183

Query: 122 TTATSFGSVQNMAQESAESSNPSQLNSMVNISHDQLVPAPMKPLNDNSVMVDPTNEVDTT 181
           T    FG V+ +    AE   P +L   +    ++L     KP  +    +D   E+D T
Sbjct: 184 TGTNQFGEVEKLDDVMAE---PRELTGQLGELEEELNNFVAKPNQEWLAKLDGIGEMDFT 240

Query: 182 EVVAFSSMQNMAQKSVESSNPCQLNSMLNNIPQGQLVSAPTK 223
           +  A +  Q+MA++    SN  Q   M +   Q Q +  P K
Sbjct: 241 QNTAHT--QSMAKEIFYPSNSNQFEGMNDGFSQWQPIYDPLK 280


>Medtr2g049610.1 | MADS-box transcription factor family protein | LC
           | chr2:21867992-21868711 | 20130731
          Length = 239

 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 2/75 (2%)

Query: 2   VEAEIARVKKEIFKMKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHRIDMLKK--ERQ 59
           VE EI++V KEI    YPTW PCF  +  EQL  F+  L AKI+AC+H+I MLKK  +R 
Sbjct: 96  VEGEISKVHKEIVMKMYPTWHPCFMNMDGEQLKTFIGILDAKIQACNHKISMLKKMQQRT 155

Query: 60  SEAVVTAFDNMQNMA 74
               +     MQN+A
Sbjct: 156 ENGFMLNTTQMQNVA 170


>Medtr6g005450.1 | MADS-box transcription factor family protein | LC
           | chr6:751556-752599 | 20130731
          Length = 347

 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 6/112 (5%)

Query: 2   VEAEIARVKKEIFKMKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHRIDMLKKERQSE 61
           VE EI++V+KE FKMKY TWD  FN L  EQL  F + L  K++AC+ +++MLK + + +
Sbjct: 102 VEFEISKVRKEKFKMKYQTWDESFNFLEDEQLRLFASILDFKLDACNLKMNMLKGDLRGK 161

Query: 62  AVVTAFDNMQNMAQESAETSNHSQLNSMLNISEGQLVRAS---SMKSLNDNN 110
           ++    + + N+       SN S   S  N+ +  + +A     + ++ND N
Sbjct: 162 SIALETNKIDNLNSSPYLDSNPS---SYFNLPQNNMSQAHIYPPLMNINDKN 210


>Medtr1g114730.1 | MADS-box transcription factor family protein | LC
           | chr1:51792967-51791924 | 20130731
          Length = 347

 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 59/109 (54%)

Query: 2   VEAEIARVKKEIFKMKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHRIDMLKKERQSE 61
           +E EI +V+KE  KM YPTW+  FN L  EQL  F +KL AK++AC+ +  MLK++ + +
Sbjct: 102 LEFEITKVRKEKLKMMYPTWNESFNSLGAEQLILFASKLEAKLDACNQKKHMLKEDLKGK 161

Query: 62  AVVTAFDNMQNMAQESAETSNHSQLNSMLNISEGQLVRASSMKSLNDNN 110
            +      +  +    + T N S   +++  S  Q      M +++D N
Sbjct: 162 TIAHESHKVDKLISTPSLTPNPSYYFNLMQNSMSQAQTYPPMMNISDKN 210


>Medtr6g005440.1 | MADS-box transcription factor family protein | LC
           | chr6:745653-746600 | 20130731
          Length = 315

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 38/56 (67%)

Query: 2   VEAEIARVKKEIFKMKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHRIDMLKKE 57
           VE EI +V+KE  KMKYPTWD  +N    EQL  F+  L +K++ACD +++M K E
Sbjct: 102 VELEIYKVRKERLKMKYPTWDESYNSFGNEQLRSFVRFLDSKLDACDQKMNMRKDE 157


>Medtr4g107170.1 | MADS-box transcription factor family protein | LC
           | chr4:44259983-44260750 | 20130731
          Length = 255

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 41/61 (67%)

Query: 2   VEAEIARVKKEIFKMKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHRIDMLKKERQSE 61
           VE +I +V+++I    YPTW P F+ L   QL  F+A ++AKI+AC+H+I MLK  +Q E
Sbjct: 99  VETKINKVRRDIISNIYPTWHPHFSNLDGNQLRDFIATINAKIQACNHKISMLKNMQQIE 158

Query: 62  A 62
            
Sbjct: 159 T 159


>Medtr6g018920.1 | MADS-box transcription factor family protein | HC
           | chr6:7327877-7326837 | 20130731
          Length = 346

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 43/63 (68%)

Query: 2   VEAEIARVKKEIFKMKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHRIDMLKKERQSE 61
           ++ EI++V+KE  KM YP+WD  +N L +EQ+  F + L +K++AC+ R+ MLK + + +
Sbjct: 102 IKFEISKVRKEKIKMMYPSWDESYNSLGVEQVRSFASMLDSKLDACNQRMHMLKGDLKGK 161

Query: 62  AVV 64
            + 
Sbjct: 162 TIA 164


>Medtr1g115290.1 | MADS-box protein, putative | LC |
           chr1:51999791-52000328 | 20130731
          Length = 156

 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 38/63 (60%)

Query: 2   VEAEIARVKKEIFKMKYPTWDPCFNELTMEQLSFFMAKLSAKIEACDHRIDMLKKERQSE 61
           V+AEI +  K+I  +KYPTW      +   QL    A + AKI+AC+H+I+M K E  +E
Sbjct: 65  VKAEIIKAHKDIIDIKYPTWHQDLVNMEASQLRDLSAVIDAKIQACNHKINMFKSEMVNE 124

Query: 62  AVV 64
            VV
Sbjct: 125 NVV 127