Miyakogusa Predicted Gene

Lj0g3v0112549.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0112549.1 Non Characterized Hit- tr|I1LCE6|I1LCE6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53726
PE,56.76,4e-19,seg,NULL,CUFF.6531.1
         (101 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g073660.2 | hypothetical protein | HC | chr1:32681667-3268...    77   4e-15
Medtr1g073660.1 | hypothetical protein | HC | chr1:32681670-3268...    77   5e-15
Medtr1g045370.1 | hypothetical protein | HC | chr1:17007105-1701...    70   4e-13

>Medtr1g073660.2 | hypothetical protein | HC |
          chr1:32681667-32683626 | 20130731
          Length = 103

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/86 (59%), Positives = 56/86 (65%), Gaps = 8/86 (9%)

Query: 2  DTESTKDANGCCVNKPXXXXXXXSLDGGKVEDH--ANGDSDSHSNSLLA-LP-RGGLSRK 57
          DT +  D     VNKP       SLD  KVEDH   NG SDS SNSLL  LP RGG++RK
Sbjct: 4  DTVTKMDTANGSVNKPVDVA---SLDCKKVEDHGHVNGKSDSDSNSLLTTLPKRGGMARK 60

Query: 58 SENKTYRRVQWNDALGNKLVEVLEYE 83
           + KT RRVQW D +GNKLVEVLEYE
Sbjct: 61 LD-KTCRRVQWTDTIGNKLVEVLEYE 85


>Medtr1g073660.1 | hypothetical protein | HC |
          chr1:32681670-32681930 | 20130731
          Length = 86

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/86 (59%), Positives = 56/86 (65%), Gaps = 8/86 (9%)

Query: 2  DTESTKDANGCCVNKPXXXXXXXSLDGGKVEDH--ANGDSDSHSNSLLA-LP-RGGLSRK 57
          DT +  D     VNKP       SLD  KVEDH   NG SDS SNSLL  LP RGG++RK
Sbjct: 3  DTVTKMDTANGSVNKPVDVA---SLDCKKVEDHGHVNGKSDSDSNSLLTTLPKRGGMARK 59

Query: 58 SENKTYRRVQWNDALGNKLVEVLEYE 83
           + KT RRVQW D +GNKLVEVLEYE
Sbjct: 60 LD-KTCRRVQWTDTIGNKLVEVLEYE 84


>Medtr1g045370.1 | hypothetical protein | HC |
          chr1:17007105-17010859 | 20130731
          Length = 101

 Score = 70.5 bits (171), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 52/84 (61%), Gaps = 4/84 (4%)

Query: 1  MDTESTKDANGCCVNKPXXXXXXXSLDGGKVEDHANGDSDSHSNSLLALPRGGLSRKSEN 60
          MD++ +KD     ++ P        ++  KVEDH NG+ DS SNSLL   RG +SR S  
Sbjct: 1  MDSKGSKDGKNYIMDTPVVVCV---MEDEKVEDHVNGEDDSDSNSLLPPRRGCMSRNS-G 56

Query: 61 KTYRRVQWNDALGNKLVEVLEYEA 84
          KT R+VQWND  GN+L EVLEYE 
Sbjct: 57 KTRRKVQWNDKNGNQLAEVLEYEP 80