Miyakogusa Predicted Gene

Lj0g3v0112319.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0112319.1 Non Characterized Hit- tr|D7TTF9|D7TTF9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,67.92,0.000000000002, ,CUFF.6512.1
         (58 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g118580.1 | hypothetical protein | LC | chr4:49106193-4911...    72   2e-13
Medtr1g040210.1 | hypothetical protein | LC | chr1:14683979-1468...    71   2e-13
Medtr1g040120.1 | hypothetical protein | HC | chr1:14706669-1470...    71   2e-13
Medtr1g040060.1 | hypothetical protein | HC | chr1:14663973-1466...    71   3e-13
Medtr1g040063.1 | hypothetical protein | LC | chr1:14667067-1466...    70   3e-13
Medtr1g040050.1 | hypothetical protein | LC | chr1:14663752-1466...    70   5e-13
Medtr1g040083.1 | hypothetical protein | HC | chr1:14680054-1467...    70   6e-13
Medtr2g101910.1 | hypothetical protein | LC | chr2:43851236-4385...    70   6e-13
Medtr5g019820.1 | hypothetical protein | LC | chr5:7525320-75249...    69   8e-13
Medtr1g040110.1 | cytochrome P450 family 96 protein, putative | ...    67   3e-12
Medtr1g040087.1 | vacuolar ATP synthase catalytic subunit-relate...    67   4e-12
Medtr1g040077.1 | carbohydrate-binding protein of the ER protein...    59   1e-09
Medtr5g012260.1 | PPR superfamily protein, putative | HC | chr5:...    47   3e-06

>Medtr4g118580.1 | hypothetical protein | LC |
           chr4:49106193-49110487 | 20130731
          Length = 174

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/56 (64%), Positives = 41/56 (73%)

Query: 1   MDLPPKKINLISCESLTHISDIKLIRTDTTLDLSQKAEKGMLLTLPCLFLYLMCVL 56
           M  PP+K NLISC+ L+HISDIKLIRTDTTLDLSQKAEK  L     + +  MC L
Sbjct: 61  MTSPPQKSNLISCDPLSHISDIKLIRTDTTLDLSQKAEKAALFVKQTMRMIDMCSL 116



 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 33/43 (76%), Positives = 37/43 (86%)

Query: 4  PPKKINLISCESLTHISDIKLIRTDTTLDLSQKAEKGMLLTLP 46
          PP+K NLISC+ L HISDIKLIRTDTTLDLSQKAEK  ++T P
Sbjct: 22 PPQKSNLISCDPLDHISDIKLIRTDTTLDLSQKAEKATVMTSP 64


>Medtr1g040210.1 | hypothetical protein | LC |
          chr1:14683979-14683745 | 20130731
          Length = 60

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/38 (89%), Positives = 35/38 (92%)

Query: 4  PPKKINLISCESLTHISDIKLIRTDTTLDLSQKAEKGM 41
          PP+K NLISCE L HISDIKLIRTDTTLDLSQKAEKGM
Sbjct: 22 PPQKSNLISCEPLVHISDIKLIRTDTTLDLSQKAEKGM 59


>Medtr1g040120.1 | hypothetical protein | HC |
          chr1:14706669-14706083 | 20130731
          Length = 69

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/38 (89%), Positives = 35/38 (92%)

Query: 4  PPKKINLISCESLTHISDIKLIRTDTTLDLSQKAEKGM 41
          PP+K NLISCE L HISDIKLIRTDTTLDLSQKAEKGM
Sbjct: 31 PPQKSNLISCEPLVHISDIKLIRTDTTLDLSQKAEKGM 68


>Medtr1g040060.1 | hypothetical protein | HC |
          chr1:14663973-14664243 | 20130731
          Length = 56

 Score = 70.9 bits (172), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/38 (89%), Positives = 35/38 (92%)

Query: 4  PPKKINLISCESLTHISDIKLIRTDTTLDLSQKAEKGM 41
          PP+K NLISCE L HISDIKLIRTDTTLDLSQKAEKGM
Sbjct: 18 PPQKSNLISCEPLVHISDIKLIRTDTTLDLSQKAEKGM 55


>Medtr1g040063.1 | hypothetical protein | LC |
          chr1:14667067-14667362 | 20130731
          Length = 71

 Score = 70.5 bits (171), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/47 (74%), Positives = 38/47 (80%)

Query: 1  MDLPPKKINLISCESLTHISDIKLIRTDTTLDLSQKAEKGMLLTLPC 47
          M  PP+K NLISCE L H+SDIKLIRTDTTLDLSQKAEK + LT  C
Sbjct: 1  MASPPRKSNLISCEPLVHVSDIKLIRTDTTLDLSQKAEKVVFLTPRC 47


>Medtr1g040050.1 | hypothetical protein | LC |
           chr1:14663752-14662257 | 20130731
          Length = 150

 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 36/42 (85%)

Query: 1   MDLPPKKINLISCESLTHISDIKLIRTDTTLDLSQKAEKGML 42
           M  PP+K NLISC  L HISDIKLIRTDTTLDLSQKAEKGM+
Sbjct: 91  MASPPQKSNLISCGPLVHISDIKLIRTDTTLDLSQKAEKGMI 132


>Medtr1g040083.1 | hypothetical protein | HC |
          chr1:14680054-14678804 | 20130731
          Length = 51

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 34/41 (82%), Positives = 35/41 (85%)

Query: 1  MDLPPKKINLISCESLTHISDIKLIRTDTTLDLSQKAEKGM 41
          M  PP+K NLISCE L HISDIKLIRTDTTLDLSQKAEKG 
Sbjct: 1  MASPPQKSNLISCEPLVHISDIKLIRTDTTLDLSQKAEKGF 41


>Medtr2g101910.1 | hypothetical protein | LC |
           chr2:43851236-43850044 | 20130731
          Length = 124

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 33/38 (86%), Positives = 36/38 (94%)

Query: 4   PPKKINLISCESLTHISDIKLIRTDTTLDLSQKAEKGM 41
           PP+K +LISC+SL HISDIKLIRTDTTLDLSQKAEKGM
Sbjct: 86  PPQKSDLISCDSLGHISDIKLIRTDTTLDLSQKAEKGM 123


>Medtr5g019820.1 | hypothetical protein | LC |
          chr5:7525320-7524963 | 20130731
          Length = 85

 Score = 69.3 bits (168), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 33/38 (86%), Positives = 35/38 (92%)

Query: 4  PPKKINLISCESLTHISDIKLIRTDTTLDLSQKAEKGM 41
          PP+K NLISC+ L HISDIKLIRTDTTLDLSQKAEKGM
Sbjct: 47 PPQKSNLISCDPLDHISDIKLIRTDTTLDLSQKAEKGM 84


>Medtr1g040110.1 | cytochrome P450 family 96 protein, putative |
          LC | chr1:14708827-14708051 | 20130731
          Length = 168

 Score = 67.0 bits (162), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/38 (84%), Positives = 34/38 (89%)

Query: 4  PPKKINLISCESLTHISDIKLIRTDTTLDLSQKAEKGM 41
          PP+K NLISCE L HISDIKLIRTDTTLDLSQKAEK +
Sbjct: 12 PPQKSNLISCEPLVHISDIKLIRTDTTLDLSQKAEKAI 49


>Medtr1g040087.1 | vacuolar ATP synthase catalytic
          subunit-related/V-ATPase-related/vacuolar proton pump
          protein, putative | LC | chr1:14681722-14681192 |
          20130731
          Length = 76

 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/39 (84%), Positives = 34/39 (87%)

Query: 1  MDLPPKKINLISCESLTHISDIKLIRTDTTLDLSQKAEK 39
          M  PP+K NLISCE L HISDIKLIRTDTTLDLSQKAEK
Sbjct: 1  MASPPQKSNLISCEPLVHISDIKLIRTDTTLDLSQKAEK 39


>Medtr1g040077.1 | carbohydrate-binding protein of the ER protein |
           LC | chr1:14678471-14675993 | 20130731
          Length = 591

 Score = 58.5 bits (140), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/33 (87%), Positives = 29/33 (87%)

Query: 11  ISCESLTHISDIKLIRTDTTLDLSQKAEKGMLL 43
           ISCE L HISDIKLIRTDTTLDLSQKAEK  LL
Sbjct: 534 ISCEPLVHISDIKLIRTDTTLDLSQKAEKDGLL 566


>Medtr5g012260.1 | PPR superfamily protein, putative | HC |
          chr5:3643902-3642433 | 20130731
          Length = 179

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/24 (91%), Positives = 23/24 (95%)

Query: 16 LTHISDIKLIRTDTTLDLSQKAEK 39
          + HISDIKLIRTDTTLDLSQKAEK
Sbjct: 1  MGHISDIKLIRTDTTLDLSQKAEK 24