Miyakogusa Predicted Gene
- Lj0g3v0111909.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0111909.1 Non Characterized Hit- tr|I1MBW5|I1MBW5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,57.14,7e-19,Zein-binding,Zein-binding domain; seg,NULL;
coiled-coil,NULL; FAMILY NOT NAMED,NULL,CUFF.6491.1
(297 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g011550.1 | zein-binding protein | HC | chr4:2845042-28411... 217 1e-56
Medtr4g011540.1 | zein-binding protein | LC | chr4:2840319-28384... 142 4e-34
Medtr0168s0060.1 | zein-binding protein | HC | scaffold0168:1885... 62 6e-10
Medtr1g070350.1 | zein-binding protein | HC | chr1:31104852-3110... 60 2e-09
Medtr1g054835.1 | zein-binding protein | HC | chr1:24015959-2402... 52 8e-07
Medtr1g054835.2 | zein-binding protein | HC | chr1:24015959-2402... 52 8e-07
Medtr7g107000.1 | zein-binding protein | HC | chr7:43593446-4359... 49 4e-06
Medtr5g078300.1 | zein-binding protein | HC | chr5:33462340-3346... 49 6e-06
>Medtr4g011550.1 | zein-binding protein | HC | chr4:2845042-2841114
| 20130731
Length = 587
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/302 (45%), Positives = 173/302 (57%), Gaps = 45/302 (14%)
Query: 2 SNMQDNFQIIGNEGDRIKMLENXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXISRLQ 61
S Q+N +I GNE + + M EN R ISRLQ
Sbjct: 258 STTQENIEIAGNEDNHVTMYENPLEGENAAYAALYLELEKERAAAATAADEAMAMISRLQ 317
Query: 62 EEKASMEMEMRQYQRMIEERDAYEEEEMNILQEILIRREREYHSLEKELESYRQTN---- 117
EEK+SMEMEMRQY+R+IEER +Y+EEEMNI+QEILIRRERE LEKELE++RQ +
Sbjct: 318 EEKSSMEMEMRQYERLIEERVSYDEEEMNIMQEILIRRERENLFLEKELETFRQMSLTES 377
Query: 118 --SNGRDGRTKLQLDGQRLPISVERYEDPPQIESTISIVKKDEIVNISSNYMVAEDYINT 175
+ + +L + P+S E +DP QIEST+ IVK +D N
Sbjct: 378 CELHSKSAEVRLSEWKRSSPLSFETCDDPSQIESTVLIVK--------------QDCTNN 423
Query: 176 EDGEELEKNTERKGQGHEDLHSCFYDTEPDVLDVHVVDDNIELREEENEKLRSYSSGTLS 235
+ EEL+KNTE K + +DLHS FYDTE DVLDVHV+DD +S T
Sbjct: 424 TEHEELDKNTEYKDRACDDLHSSFYDTESDVLDVHVIDDG------------QCASKT-- 469
Query: 236 NEHDVSIDGPASQLSMFSNSRCKTLPSDSGSDSSCAVHNEKLKIVNEIEILGERLRMVKH 295
E D +DG S+CK+LP DS SDSSC +H+E+++I NEIE+LGERL+MVKH
Sbjct: 470 -EFDNRVDG----------SKCKSLPFDSESDSSCLIHDERVRIDNEIEVLGERLKMVKH 518
Query: 296 EK 297
EK
Sbjct: 519 EK 520
>Medtr4g011540.1 | zein-binding protein | LC | chr4:2840319-2838435
| 20130731
Length = 464
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 115/217 (52%), Gaps = 38/217 (17%)
Query: 2 SNMQDNFQIIGNEGDRIKMLENXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXISRLQ 61
+ +DN QI+ NE +RIKMLE I RLQ
Sbjct: 270 TTAKDNVQIVENEDNRIKMLEKAIEEEKAAYAALYLELEKEITAAATAADDAMAMILRLQ 329
Query: 62 EEKASMEMEMRQYQRMIEERDAYEEEEMNILQEILIRREREYHSLEKELESYRQTNSNGR 121
EEKASMEMEMRQY+R+IEER AY+EEEMNI+QEILIRRE+E LEKELESYR +
Sbjct: 330 EEKASMEMEMRQYERLIEERAAYDEEEMNIMQEILIRREKENLFLEKELESYRPS----- 384
Query: 122 DGRTKLQLDGQRLPISVERYEDPPQIESTISIVKKDEIVNISSNYMVAEDYINTEDGEEL 181
+S E +DP Q ES +S VKK D + + GEE+
Sbjct: 385 --------------LSFETCDDPSQAESIVSNVKK--------------DCADADHGEEV 416
Query: 182 EKNTERKGQGHEDLHSCFYDTEPDVLDVHVVDDNIEL 218
E+N++ K Q D+H FYDTE DVL DDNIEL
Sbjct: 417 EENSQHKDQACNDMHRSFYDTESDVL-----DDNIEL 448
>Medtr0168s0060.1 | zein-binding protein | HC |
scaffold0168:18855-21061 | 20130731
Length = 520
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 57 ISRLQEEKASMEMEMRQYQRMIEERDAYEEEEMNILQEILIRREREYHSLEKELESYR 114
I+RLQ EKA+++ME QYQRM+EE+ Y+EE + ++LI+RE E +LE EL+ YR
Sbjct: 370 ITRLQAEKAAVQMEALQYQRMMEEQAEYDEEALEATNDMLIKREEEIRALEAELDFYR 427
>Medtr1g070350.1 | zein-binding protein | HC |
chr1:31104852-31101335 | 20130731
Length = 866
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%)
Query: 57 ISRLQEEKASMEMEMRQYQRMIEERDAYEEEEMNILQEILIRREREYHSLEKELESYR 114
I+RLQEEKAS++ME QY RM+EE+ Y+ EE++ + ++L +E+E LE EL+ YR
Sbjct: 569 ITRLQEEKASLQMEAHQYLRMMEEQAEYDNEELDKVNDLLTEKEKEIQDLEAELDYYR 626
>Medtr1g054835.1 | zein-binding protein | HC |
chr1:24015959-24022175 | 20130731
Length = 486
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 57 ISRLQEEKASMEMEMRQYQRMIEERDAYEEEEMNILQEILIRREREYHSLEKELESYRQT 116
I RLQ EKA ++ME RQ++R EE+ +++EE+ L+++L +RE+ SL E+++Y+
Sbjct: 101 ILRLQREKAEVQMEARQFKRFAEEKMTHDQEELMSLEDLLYKREQIIQSLTCEVQAYKHR 160
Query: 117 NSNGRDGRTKLQLDGQRLPISVERYEDPP 145
+ G T+ +++G + + YE PP
Sbjct: 161 MMSF--GYTEDEVEGDQYD-DIPPYEYPP 186
>Medtr1g054835.2 | zein-binding protein | HC |
chr1:24015959-24022175 | 20130731
Length = 486
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 57 ISRLQEEKASMEMEMRQYQRMIEERDAYEEEEMNILQEILIRREREYHSLEKELESYRQT 116
I RLQ EKA ++ME RQ++R EE+ +++EE+ L+++L +RE+ SL E+++Y+
Sbjct: 101 ILRLQREKAEVQMEARQFKRFAEEKMTHDQEELMSLEDLLYKREQIIQSLTCEVQAYKHR 160
Query: 117 NSNGRDGRTKLQLDGQRLPISVERYEDPP 145
+ G T+ +++G + + YE PP
Sbjct: 161 MMSF--GYTEDEVEGDQYD-DIPPYEYPP 186
>Medtr7g107000.1 | zein-binding protein | HC |
chr7:43593446-43590055 | 20130731
Length = 481
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 44/59 (74%)
Query: 57 ISRLQEEKASMEMEMRQYQRMIEERDAYEEEEMNILQEILIRREREYHSLEKELESYRQ 115
I RLQ EKA +EME RQ++R +EER ++++E+ L+E+L +RE+ HSL E+++Y+
Sbjct: 106 ILRLQTEKAELEMEARQFKRFVEERTCHDQQELLALEELLYKREQVIHSLTCEVQAYKH 164
>Medtr5g078300.1 | zein-binding protein | HC |
chr5:33462340-33466036 | 20130731
Length = 986
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 33/40 (82%)
Query: 57 ISRLQEEKASMEMEMRQYQRMIEERDAYEEEEMNILQEIL 96
I+RLQEEKA+M+ME QYQRM+EE+ Y++E + +L +++
Sbjct: 656 ITRLQEEKAAMQMEALQYQRMMEEQAEYDQEALQLLNDLM 695