Miyakogusa Predicted Gene

Lj0g3v0111739.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0111739.1 tr|Q09085|Q09085_PHAVU Hydroxyproline-rich
glycoprotein (HRGP) (Fragment) OS=Phaseolus vulgaris
PE=2,70.97,0.000000000003,seg,NULL,CUFF.6782.1
         (94 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g033100.1 | pollen protein Ole E I-like protein | LC | chr...    93   6e-20
Medtr1g116947.1 | pollen protein Ole E I-like protein | LC | chr...    91   2e-19
Medtr1g033130.1 | pollen protein Ole E I-like protein | LC | chr...    91   2e-19
Medtr1g033080.1 | pollen Ole e I family allergens | HC | chr1:11...    91   3e-19

>Medtr1g033100.1 | pollen protein Ole E I-like protein | LC |
           chr1:11890072-11892621 | 20130731
          Length = 546

 Score = 92.8 bits (229), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 45/53 (84%), Positives = 50/53 (94%)

Query: 2   LYAPPKHSPYGIPTKLNVGTDLHVKSKDKYEVVLKAKPFAYASKKHFKECEKT 54
           LYAPPK SP+ IPTKLN GT+L++KSKDKYEVVLKAKPFAYASKKHFKECEK+
Sbjct: 51  LYAPPKGSPFNIPTKLNQGTNLYLKSKDKYEVVLKAKPFAYASKKHFKECEKS 103


>Medtr1g116947.1 | pollen protein Ole E I-like protein | LC |
           chr1:52822361-52817506 | 20130731
          Length = 1074

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/52 (86%), Positives = 48/52 (92%)

Query: 2   LYAPPKHSPYGIPTKLNVGTDLHVKSKDKYEVVLKAKPFAYASKKHFKECEK 53
           LYAPPK SP+ IPTKLN GTDL VKSKDKYEVVLKAKPFAYASKKH++ECEK
Sbjct: 500 LYAPPKDSPFNIPTKLNEGTDLKVKSKDKYEVVLKAKPFAYASKKHYEECEK 551


>Medtr1g033130.1 | pollen protein Ole E I-like protein | LC |
           chr1:11901677-11906311 | 20130731
          Length = 1163

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/52 (86%), Positives = 48/52 (92%)

Query: 2   LYAPPKHSPYGIPTKLNVGTDLHVKSKDKYEVVLKAKPFAYASKKHFKECEK 53
           LYAPPK SP+ IPTKLN GT L++KSKDKYEVVLKAKPFAYASKKHFKECEK
Sbjct: 509 LYAPPKGSPFNIPTKLNQGTKLYLKSKDKYEVVLKAKPFAYASKKHFKECEK 560


>Medtr1g033080.1 | pollen Ole e I family allergens | HC |
           chr1:11878922-11883894 | 20130731
          Length = 1097

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/52 (86%), Positives = 48/52 (92%)

Query: 2   LYAPPKHSPYGIPTKLNVGTDLHVKSKDKYEVVLKAKPFAYASKKHFKECEK 53
           LYAPPK SP+ IPTKLN GT L++KSKDKYEVVLKAKPFAYASKKHFKECEK
Sbjct: 542 LYAPPKGSPFNIPTKLNQGTKLYLKSKDKYEVVLKAKPFAYASKKHFKECEK 593