Miyakogusa Predicted Gene
- Lj0g3v0111659.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0111659.1 tr|A0EFD6|A0EFD6_PARTE Chromosome undetermined
scaffold_93, whole genome shotgun sequence OS=Paramec,32.3,7e-17,no
description,Tetratricopeptide-like helical; seg,NULL;
TPR-like,NULL,CUFF.6463.1
(1159 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase supe... 1113 0.0
Medtr4g074550.1 | hypothetical protein | HC | chr4:28395837-2839... 503 e-142
Medtr5g080800.1 | AAA domain protein | LC | chr5:34606228-346008... 293 6e-79
Medtr7g006750.1 | pectinacetylesterase family protein | LC | chr... 163 8e-40
Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase super... 110 7e-24
Medtr7g055900.1 | hypothetical protein | HC | chr7:18962082-1896... 108 2e-23
Medtr0189s0040.1 | hypothetical protein | LC | scaffold0189:2467... 100 1e-20
>Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | scaffold0189:14094-24465 |
20130731
Length = 2395
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/829 (66%), Positives = 649/829 (78%), Gaps = 16/829 (1%)
Query: 1 MLEPAESKSYPSFNDSKHNILCSELKQLYVSITRTRQRLWICENTEEFSRPMFDYWKKKE 60
MLEP ESKS+PSFNDSKHN+LCSELKQLYV+ITRTRQRLWICENTEE+ RPMFDYWK K
Sbjct: 1572 MLEPTESKSFPSFNDSKHNLLCSELKQLYVAITRTRQRLWICENTEEYCRPMFDYWKMKH 1631
Query: 61 LVQFKELDESLAQAMKVASSPEEWKSRGKKLYYQNNFEMATMCFERAGDSYWEKKSKAAS 120
LVQFKELD+SL+QAMKVASS E+WKSRGKKLYYQNN+EMATMCF+RAGDSYWEK+SKAA
Sbjct: 1632 LVQFKELDDSLSQAMKVASSSEDWKSRGKKLYYQNNYEMATMCFQRAGDSYWEKRSKAAG 1691
Query: 121 LRAIANRLHDSNPGDANAILREAAEIFEDIGMANSAAQCFSDLGDFERAGKLYLQTSEEP 180
LRA ANRLHD NP +ANA LREA EIFE IGMA SAAQCFSDLGD++RAGK+YL+ E P
Sbjct: 1692 LRATANRLHDLNPENANAFLREAGEIFESIGMAESAAQCFSDLGDYKRAGKIYLEKCE-P 1750
Query: 181 DLKRAGDCFDLAGCYEIAAQVYARGSFFSDCLAVCAKGRLFDTGFSYIQHWKQNEAADPC 240
DLKRAGDCF LAGC+++AAQVYARGSFF DCL VCAKG LFD G YIQ KQNE+ DP
Sbjct: 1751 DLKRAGDCFYLAGCHKMAAQVYARGSFFLDCLNVCAKGGLFDIGLHYIQRRKQNESVDPG 1810
Query: 241 MVKSHDLNSMEQKFLESCAHNYLDHEDISSVMNLVKTFHTMDSKRAFXXXXXXXXXXXXX 300
SHDL ++EQKFL+ CA Y ++DI S+M V+ FH+MD +R F
Sbjct: 1811 WANSHDLYAIEQKFLQKCARKYFGNKDIKSMMKFVRAFHSMDLRREFLQSLSLLDELLEL 1870
Query: 301 XXXSGNFLEAVNIAMMLGDIQHEADLLGKAGRFKEAFELLLFYVLANSLWSSGSKGWPVK 360
SGNF+EAVNIA M+GDI EADLLGK G EA+EL+LFYVLANSLW GS WP+K
Sbjct: 1871 EEESGNFMEAVNIAKMMGDILREADLLGKVGELLEAYELVLFYVLANSLWYKGSLAWPMK 1930
Query: 361 QFAQKTELLGRALSFAKEESDHFYELASTEADVLSNDHKKVSEIMIHLKSSRMHESIRGE 420
QF QK ELLGRAL+FAKE S+ FYELASTEA++LSN+H + EIM LKSSR+H SIRGE
Sbjct: 1931 QFTQKAELLGRALAFAKEVSNSFYELASTEAEILSNEHDNIFEIMNQLKSSRIHGSIRGE 1990
Query: 421 ILCLWQLLDAHCHLNNSKYVWQDNVINDAVEGMILENHLSVETLFHCWTCWKDNIVLILE 480
ILCL +LLD+H +N SKYVWQDN+++ +VEGMIL+NH SVETLF+CWTCWKDNIV +LE
Sbjct: 1991 ILCLRKLLDSHFRMNTSKYVWQDNMLDVSVEGMILKNHFSVETLFYCWTCWKDNIVHMLE 2050
Query: 481 CLQSFKAPSIHQLSSYAKFALNYLGVRKLTCNLNEIYSLLVPDANWVMKLGDRFQKKNGR 540
L +FK HQ SY KFA NYLGV+K NL ++Y LL+PDANWV KLGDR KNGR
Sbjct: 2051 SLSNFKPQEPHQHCSYVKFAFNYLGVQKQIYNLKDVYLLLIPDANWVKKLGDRLL-KNGR 2109
Query: 541 LVFVDIDSFVSSAQSYWSSELLSVGIAVLRNLEALYKFSVKTDLSDFCQFQSLLHIYEVS 600
LV V++ VS Q+YWSSELLSVG+ VLRNL+AL+KFSV S+FCQ QSLLHIYEVS
Sbjct: 2110 LVSVNVQPLVSVVQNYWSSELLSVGMDVLRNLDALFKFSVNKAFSEFCQVQSLLHIYEVS 2169
Query: 601 EFLLGSKCFSHTHGNLKTLDKFRRLPIDRSLRYIVPLDWKKSLTKDMVFLRTTEACKGLL 660
+FLL SKCFSH HGNLKTL+ F R PI+ +VPLDWKK+LTK+M +LR TEAC+ ++
Sbjct: 2170 KFLLKSKCFSHGHGNLKTLETFYRTPIECLFHLLVPLDWKKTLTKEMFYLRETEACQNIM 2229
Query: 661 KDAIYENIRLKDRLTYGQIGRVAVMVLGTASLLNELYVEIMTRFE-DSIHWKKFIQ--QW 717
K+ IYEN + K RLTYGQIGRV VMVLGTA++ +EL+V+I+ RFE D+ WK+FIQ Q
Sbjct: 2230 KEVIYENTKQKGRLTYGQIGRVVVMVLGTANVKDELFVQILKRFEDDNTPWKEFIQGVQL 2289
Query: 718 SSAQEISQRNDSFAERNHVLSLYEALEHTYNVKWIKETDYLSPSCFMYLVERLLLLAS-- 775
+SA E++ D R H L++AL++TY V W+ E DY+SPSCFMYL+ERLLL S
Sbjct: 2290 NSANEVTFEVD----RTH--RLFKALDYTYRVNWMNEVDYMSPSCFMYLIERLLLYVSHL 2343
Query: 776 -CGKKGFMFATKSSFIEWLNFQDENSLANLSLTPGM--NMTDVHKFIAR 821
+KGF++ TKSSF EWL QDENSL+ LS P + ++ V FIA+
Sbjct: 2344 NGYRKGFIYVTKSSFTEWLICQDENSLSKLSFVPVVQSDIKPVLDFIAK 2392
>Medtr4g074550.1 | hypothetical protein | HC |
chr4:28395837-28398506 | 20130731
Length = 371
Score = 503 bits (1295), Expect = e-142, Method: Compositional matrix adjust.
Identities = 249/371 (67%), Positives = 286/371 (77%), Gaps = 2/371 (0%)
Query: 99 MATMCFERAGDSYWEKKSKAASLRAIANRLHDSNPGDANAILREAAEIFEDIGMANSAAQ 158
MATMCFERAGDSYW KKSKAASLRA A RLHD N DANAILREAAEIFE +GM +SAAQ
Sbjct: 1 MATMCFERAGDSYWGKKSKAASLRATAIRLHDLNLEDANAILREAAEIFEGLGMVDSAAQ 60
Query: 159 CFSDLGDFERAGKLYLQTSEEPDLKRAGDCFDLAGCYEIAAQVYARGSFFSDCLAVCAKG 218
CF+DLGD+ERAGK+YL+ EEPDLKRAGDCF LA CY +AAQVYARGSFFSDCL VCAKG
Sbjct: 61 CFTDLGDYERAGKIYLEKCEEPDLKRAGDCFFLARCYHMAAQVYARGSFFSDCLNVCAKG 120
Query: 219 RLFDTGFSYIQHWKQNEAADPCMVKSHDLNSMEQKFLESCAHNYLDHEDISSVMNLVKTF 278
L DTG YIQ WKQNE ADP SHDL ++EQKF+E+CA NY D D S+M V+ F
Sbjct: 121 GLLDTGSHYIQCWKQNERADPGWANSHDLYAIEQKFMENCALNYFDKNDYRSMMKFVRAF 180
Query: 279 HTMDSKRAFXXXXXXXXXXXXXXXXSGNFLE-AVNIAMMLGDIQHEADLLGKAGRFKEAF 337
H++D KR F SGNF+E AVNIA +GDI EADLLGKAG F +A+
Sbjct: 181 HSIDLKRGFLQSLNLPDELLELEEESGNFMEAAVNIAKTMGDILREADLLGKAGEFLDAY 240
Query: 338 ELLLFYVLANSLWSSGSKGWPVKQFAQKTELLGRALSFAKEESDHFYELASTEADVLSND 397
EL+ FYV A SLWS GSK WP+KQF QK LLG+AL+FAKE S FYELAST+ + LSN
Sbjct: 241 ELVFFYVFAKSLWSGGSKAWPLKQFTQKAGLLGKALTFAKEVSSSFYELASTKVE-LSNK 299
Query: 398 HKKVSEIMIHLKSSRMHESIRGEILCLWQLLDAHCHLNNSKYVWQDNVINDAVEGMILEN 457
H + EI+ LKSSR+H SIRGEILCLW+LLD+H LN+SKYVWQD++ + +VEGMI++N
Sbjct: 300 HDNIFEIVNQLKSSRIHSSIRGEILCLWELLDSHFRLNSSKYVWQDSMFDVSVEGMIMKN 359
Query: 458 HLSVETLFHCW 468
LSVETLF CW
Sbjct: 360 QLSVETLFCCW 370
>Medtr5g080800.1 | AAA domain protein | LC | chr5:34606228-34600879
| 20130731
Length = 1281
Score = 293 bits (751), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 147/262 (56%), Positives = 175/262 (66%), Gaps = 26/262 (9%)
Query: 179 EPDLKRAGDCFDLAGCYEIAAQVYARGSFFSDCLAVCAKGRLFDTGFSYIQHWKQNEAAD 238
+PDLKRA DCF LA C+E+AAQVYARGSFFSDCL VCAKG LFD G YI+ WKQNE+AD
Sbjct: 676 QPDLKRARDCFYLARCHEMAAQVYARGSFFSDCLNVCAKGGLFDIGLHYIECWKQNESAD 735
Query: 239 PCMVKSHDLNSMEQKFLESCAHNYLDHEDISSVMNLVKTFHTMDSKRAFXXXXXXXXXXX 298
P SHDLN++EQKF+E+CAHNY + +DI S+M V+ FH+M+ KR F
Sbjct: 736 PGWANSHDLNAIEQKFMENCAHNYFEKKDIKSMMKFVRAFHSMNLKRRFLLSLSLLDELL 795
Query: 299 XXXXXSGNFLEAVNIAMMLGDIQHEADLLGKAGRFKEAFELLLFYVLANSLWSSGSKGWP 358
SGNF+ E +EL+ FYVLA SLWS GSK WP
Sbjct: 796 ELEEESGNFM--------------------------EVYELMFFYVLAKSLWSGGSKAWP 829
Query: 359 VKQFAQKTELLGRALSFAKEESDHFYELASTEADVLSNDHKKVSEIMIHLKSSRMHESIR 418
KQF +K +LLGRAL+FAK S FYELASTE + LSN H + EIM LKSSR++ SIR
Sbjct: 830 FKQFTEKEDLLGRALTFAKVVSSSFYELASTEVERLSNKHDNIFEIMNQLKSSRIYRSIR 889
Query: 419 GEILCLWQLLDAHCHLNNSKYV 440
GEILCLW+LLD+H LN+SK V
Sbjct: 890 GEILCLWKLLDSHFRLNSSKVV 911
Score = 277 bits (708), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 154/307 (50%), Positives = 207/307 (67%), Gaps = 22/307 (7%)
Query: 680 GRVAVMVLGTASLLNELYVEIMTRFEDSIHWKKFIQ--QWSSAQEISQRNDSFAERNHVL 737
+V VM+LGTA++ ++ +V++MTRFED+ H K FI + SA I + E +
Sbjct: 908 SKVVVMILGTANVKDDPFVQVMTRFEDNKHGKDFIDSLRLYSAHGILPHKKTEFEMHPTC 967
Query: 738 SLYEALEHTYNVKWIKETDYLSPSCFMYLVERLLLLASCGKKGFMFATKSSFIEWLNFQD 797
LY+AL +T++V IKE DY+SPSCFMYL E+LLLL SC + ++ATKSSF EWL Q+
Sbjct: 968 KLYKALCYTWSVNRIKEVDYISPSCFMYLFEQLLLLTSCSRGRLIYATKSSFTEWLICQN 1027
Query: 798 ENSLANLSLTPGMNMTDVHKFIARVLQELIYNQNDTINWIRKSNLDVKNYLPLFVLRLVV 857
+ SLA+LS P ++ DVH F+ L++ + +QND WI+KSNLDV NY P LR VV
Sbjct: 1028 KFSLASLSFAP-VDTRDVHDFVENFLRKFVNDQNDIKTWIKKSNLDVDNYFPSLFLRSVV 1086
Query: 858 SVCLLHLST--RKYGETLCILLGNSHITSQLPLEFCDVLMKGRGNLGLEVFSEAFKVIGN 915
S+CLLHLST RKY E L LL NS++T+Q+PLEFC+VL KG ++GL
Sbjct: 1087 SMCLLHLSTGSRKYLELLRCLLKNSYMTTQMPLEFCNVLQKGNKHMGL------------ 1134
Query: 916 PLVIVKVGNSSSEIVCPDAVFVDFMVCRQKELILQMLFPDRVDDSIGGENAAIIVESSDS 975
L +K+ NSSS+I+C DAVFVD C+++EL+L+MLFP V DS+GGE A E+S+S
Sbjct: 1135 -LRHLKLQNSSSKIMCSDAVFVDLATCKKRELVLEMLFPSIV-DSVGGETTA---EASES 1189
Query: 976 TSKETPS 982
SKE PS
Sbjct: 1190 KSKEFPS 1196
>Medtr7g006750.1 | pectinacetylesterase family protein | LC |
chr7:1220390-1217478 | 20130731
Length = 816
Score = 163 bits (413), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 120/197 (60%), Gaps = 38/197 (19%)
Query: 742 ALEHTYNVKWIKETDYLSPSCFMYLVERLLLLASCGKKGFMFATKSSFIEWLNFQDENSL 801
A +T +V WIKE DY+SP CFMYLVE LLLL SC KGF+ +TKSSFIEWL QD NSL
Sbjct: 309 AASYTCSVNWIKEVDYISPDCFMYLVEWLLLLTSCW-KGFIHSTKSSFIEWLICQDANSL 367
Query: 802 ANLSLTPGMNMTDVHKFIARVLQELIYNQNDTINWIRKSNLDVKNYLPLFVLRLVVSVCL 861
+N S + + H FIA +L+E C
Sbjct: 368 SNFSFMSD-ELDNAHDFIANILRE----------------------------------CS 392
Query: 862 LHLS--TRKYGETLCILLGNSHITSQLPLEFCDVLMKGRGNLGLEVFSEAFKVIGNPLVI 919
LHLS + KY + L LLG HIT+QL LEFC+VL +G+ +LGLEVF++AFKVIGNPL+I
Sbjct: 393 LHLSSGSGKYLQLLGNLLGKRHITNQLQLEFCNVLQEGKKHLGLEVFAKAFKVIGNPLII 452
Query: 920 VKVGNSSSEIVCPDAVF 936
K+ N+S +I+C DA+
Sbjct: 453 AKLRNNSRKIMCLDAIL 469
>Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:12235889-12229184 |
20130731
Length = 1644
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 1 MLEPAESKSYPSFNDSKHNILCSELKQLYVSITRTRQRLWICENTEEFSRPMFDYWKKKE 60
+L+P S++ SF DSKHN+LCSELKQLYV++TR R+RLWICE+ EEFS+PMF YW+KK
Sbjct: 1567 LLDP-RSRNCQSFVDSKHNVLCSELKQLYVALTRARKRLWICEDVEEFSKPMFSYWEKKN 1625
Query: 61 LVQFKELDESLAQAMKV 77
LVQFK L+ SL + MKV
Sbjct: 1626 LVQFKILNSSLVETMKV 1642
>Medtr7g055900.1 | hypothetical protein | HC |
chr7:18962082-18965703 | 20130731
Length = 437
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 171/362 (47%), Gaps = 40/362 (11%)
Query: 640 KKSLTKDMVFLRTTEACKGLLKDAIYE-----NIRLKDRLTYGQIGRVAVMVLGTASLLN 694
+ SL+K++V R + L D I E K L+ ++GRV V +LG + +
Sbjct: 25 QNSLSKELVLKRDKDE---LELDVIEEIMAACTYNKKKHLSNEEVGRVMVELLGKKKIDD 81
Query: 695 ELYVEIMTRFEDSIHWKKFIQQWSSAQEISQRNDSFA-ERNHVLSLYEALEHTYNVKWIK 753
+ E+ D W F+ + +FA E + +LY+AL+H+++V W K
Sbjct: 82 SVLEELRKMLNDRPSWVNFVNCMLGFDSVG----TFAKELSMFWTLYKALQHSHSVDW-K 136
Query: 754 ETDYLSPSCFMYLVERLLLLASCGKKG-FMFATKSSFIEWLNFQDENSLANLSLTPGMNM 812
++P+C MYL++RL L AS +G +++ATKS+ +EW+ ++ +N+ N
Sbjct: 137 HNGVITPTCAMYLIDRLALQASLWSQGDYLYATKSTVVEWILNENIEKYSNIP----SNT 192
Query: 813 TDVHKFIARVLQELIYN-----------QNDTINWI--RKSNLDVKNYLPLFVLRLVVSV 859
+D +++ E +YN Q + W+ K + +V++ V+ L +
Sbjct: 193 SDHLSHGLQLINEFLYNFLDSYTIHACGQKSRMRWMDNTKGDSNVQDTETDLVVWLTAAK 252
Query: 860 CLLHLSTR-KYGETLCILLGNSHITSQLPLEFCDVLMKG-----RGNLGLEVFSEAFKVI 913
CLLH++ K + LL N I +LPL+ D L KG + L S+A K++
Sbjct: 253 CLLHINRGFKLSGNIHWLLQNEGIKKKLPLKLFDTLSKGFVEKNIKEVELVAISDALKLL 312
Query: 914 GNPLVIVKVGNSSSEI--VCPDAVFVDFMVCRQKELILQMLFPDRVDDSIGGENAAIIVE 971
NPLVIV++ S + A+ ++F + + + + LFP VD I E I +
Sbjct: 313 ENPLVIVELKRSYKKTNNAPSSAILLNFETWQDRSNLWKELFPFEVDQQIKSEKRKGIEK 372
Query: 972 SS 973
S
Sbjct: 373 PS 374
>Medtr0189s0040.1 | hypothetical protein | LC |
scaffold0189:24676-25965 | 20130731
Length = 269
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 901 LGLEVFSEAFKVIGNPLVIVKVGNSSSEIVCPDAVFVDFMVCRQKELILQMLFPDRVDDS 960
+GLEV +EAFKVIGNPLVIV++ NSSS+IVC DAVFVD C+ +ELILQ+LFP RV DS
Sbjct: 1 MGLEVIAEAFKVIGNPLVIVRLQNSSSKIVCSDAVFVDLGTCQTRELILQILFPRRV-DS 59
Query: 961 IGGENAAIIVESS 973
+ E AA+I E S
Sbjct: 60 MAVETAAVITEPS 72