Miyakogusa Predicted Gene

Lj0g3v0109839.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0109839.1 Non Characterized Hit- tr|D7MNU4|D7MNU4_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,68.97,2e-17,seg,NULL,CUFF.6323.1
         (64 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g077610.1 | methyltransferase family protein, putative | H...    87   3e-18

>Medtr8g077610.1 | methyltransferase family protein, putative | HC |
           chr8:33014274-33015339 | 20130731
          Length = 245

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/46 (82%), Positives = 42/46 (91%)

Query: 18  AHTRRWKKESVFFKKARKHFNVDVLHVDTPSNGSRVGVVVYRFVGK 63
           AH +RWKKES+FFKKARK+F VDVLHVD P NGSRVGV+VYRFVGK
Sbjct: 196 AHMKRWKKESLFFKKARKYFFVDVLHVDAPCNGSRVGVIVYRFVGK 241