Miyakogusa Predicted Gene

Lj0g3v0109619.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0109619.1 Non Characterized Hit- tr|I1MJ16|I1MJ16_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57062
PE,81.65,0,DUF572,CWC16 protein; coiled-coil,NULL; seg,NULL; SUBFAMILY
NOT NAMED,NULL; CELL CYCLE CONTROL PROTE,CUFF.6304.1
         (312 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g070740.1 | coiled-coil protein | HC | chr2:29824496-29819...   441   e-124
Medtr8g008730.1 | coiled-coil protein | HC | chr8:1835765-184384...   439   e-123
Medtr1g073720.1 | coiled-coil protein | HC | chr1:32716787-32717...   378   e-105
Medtr8g008730.2 | coiled-coil protein | HC | chr8:1835765-184262...   375   e-104
Medtr1g093770.1 | coiled-coil protein | HC | chr1:42080139-42076...    79   5e-15

>Medtr2g070740.1 | coiled-coil protein | HC | chr2:29824496-29819955
           | 20130731
          Length = 327

 Score =  441 bits (1134), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/327 (72%), Positives = 257/327 (78%), Gaps = 15/327 (4%)

Query: 1   MGERKVLNKYYPPDFDPAKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPAKLPR RRPKN QIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPAKLPRVRRPKNLQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDCIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGATRNFEPWRAEDEVADK 120
           ED IGETYLGIQIFRFYFKCT+CSAELTMKTDPQNSDY+VESGATRNFEPWRAEDE  D+
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTMKTDPQNSDYVVESGATRNFEPWRAEDEETDE 120

Query: 121 MKEKREAEEVGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDEMLAALQRTX 180
           MK+KRE EE+GDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDEMLAALQRT 
Sbjct: 121 MKKKRETEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDEMLAALQRTA 180

Query: 181 XXXXXXXXXXXXXXIKSVIFNNSEGYVKRVHDEDIESDEEFAQVSDVHGETSNYNPKRQK 240
                         IKS+  N  E  ++R+ DEDIE +EE  Q S+ HGE+SN N KRQK
Sbjct: 181 ADKEKRIEEEDEALIKSIFSNKPEVPIRRIRDEDIEDEEELFQFSNGHGESSNDNLKRQK 240

Query: 241 VSEDLPGKATDSLTKASLDDSGKQENSRPSGGKLHSLVKISVIKKPMASDVKSDAE---- 296
           +SEDLP KATD+LTKA LDDS KQE       K + LV I+VIKKP  S+V+S  E    
Sbjct: 241 ISEDLPRKATDTLTKAGLDDSDKQEKLTAGRRKSNPLVTIAVIKKPGISNVRSAEEDKQK 300

Query: 297 ----------PGGLQSLCQ-YGSDEDE 312
                      GGL SLCQ YGS ++E
Sbjct: 301 KKEEDDKTNTAGGLLSLCQNYGSSDEE 327


>Medtr8g008730.1 | coiled-coil protein | HC | chr8:1835765-1843840 |
           20130731
          Length = 323

 Score =  439 bits (1128), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/293 (77%), Positives = 243/293 (82%)

Query: 1   MGERKVLNKYYPPDFDPAKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPAKLPR RRP+N QI VRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPAKLPRVRRPENLQINVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDCIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGATRNFEPWRAEDEVADK 120
           ED IGETYLGIQIFRFYFKCT+CSAELTMKTDPQNSDY+VESGATRNFEPWRAEDE  D+
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTMKTDPQNSDYVVESGATRNFEPWRAEDEETDE 120

Query: 121 MKEKREAEEVGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDEMLAALQRTX 180
           MK+KREAEE+GDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSV EML ALQRT 
Sbjct: 121 MKKKREAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVAEMLVALQRTA 180

Query: 181 XXXXXXXXXXXXXXIKSVIFNNSEGYVKRVHDEDIESDEEFAQVSDVHGETSNYNPKRQK 240
                         IKS+  N SE  + R+ DEDIE +EE  Q S+ HGETSN NPKRQK
Sbjct: 181 ADKEKRIEEEDEALIKSIFSNKSEVPISRIRDEDIEDEEELFQFSNGHGETSNDNPKRQK 240

Query: 241 VSEDLPGKATDSLTKASLDDSGKQENSRPSGGKLHSLVKISVIKKPMASDVKS 293
           +SEDLP KATD+LTKASLDDS KQE       K + LV I+VIKKP  S+V+S
Sbjct: 241 ISEDLPRKATDTLTKASLDDSDKQEKLTAGRRKSNPLVTIAVIKKPGISNVRS 293


>Medtr1g073720.1 | coiled-coil protein | HC | chr1:32716787-32717732
           | 20130731
          Length = 298

 Score =  378 bits (971), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 204/314 (64%), Positives = 228/314 (72%), Gaps = 19/314 (6%)

Query: 1   MGERKVLNKYYPPDFDPAKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPAKLPR +  K +QI VR ML M+IRCNTCGN++YKGTK NSRK
Sbjct: 1   MGERKVLNKYYPPDFDPAKLPRGK--KTKQIPVRHMLSMTIRCNTCGNFMYKGTKLNSRK 58

Query: 61  EDCIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGATRNFEPWRAEDEVADK 120
           E   GETYLGIQIFRFY KCT CSAE TMKTDP+NSDY+VE GATRNFEPWRAED+ +D+
Sbjct: 59  EVVEGETYLGIQIFRFYGKCTCCSAEYTMKTDPRNSDYVVEFGATRNFEPWRAEDKESDE 118

Query: 121 MKEKREAEEVGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDEMLAALQRTX 180
            K+KREAEE+GDAMKSLEN+TLDSKREMDILAALDEMKSMKSRHATVSVD+MLAALQR  
Sbjct: 119 RKKKREAEEIGDAMKSLENKTLDSKREMDILAALDEMKSMKSRHATVSVDKMLAALQRKA 178

Query: 181 XXXXXXXXXXXXXXIKSVIFNNSEGYVKRVHDEDIESDEEFAQVSDVHGETSNYNPKRQK 240
                         IKS+  NNSE  + R+ D               HGETSN N KR+K
Sbjct: 179 ADKEKRLVEEDEALIKSIFSNNSEVSISRIRDR--------------HGETSNNNLKRRK 224

Query: 241 VSEDLPGKATDSLTKASLDDSGKQENSRPSGGKLHSLVKISVIKKPMASDVK-SDAEPGG 299
           +S+DL  KA  +LTKA LDDS KQ        K + L  ISV+KKP  S+VK S    G 
Sbjct: 225 ISKDLSEKAAGTLTKAGLDDSDKQGKLIGGRQKPNPLAMISVVKKPETSNVKRSTNTNGA 284

Query: 300 LQSLC-QYG-SDED 311
           L SLC  YG SDED
Sbjct: 285 LLSLCLSYGSSDED 298


>Medtr8g008730.2 | coiled-coil protein | HC | chr8:1835765-1842629 |
           20130731
          Length = 248

 Score =  375 bits (964), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/239 (79%), Positives = 202/239 (84%)

Query: 1   MGERKVLNKYYPPDFDPAKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60
           MGERKVLNKYYPPDFDPAKLPR RRP+N QI VRMMLPMSIRCNTCGNYIYKGTKFNSRK
Sbjct: 1   MGERKVLNKYYPPDFDPAKLPRVRRPENLQINVRMMLPMSIRCNTCGNYIYKGTKFNSRK 60

Query: 61  EDCIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGATRNFEPWRAEDEVADK 120
           ED IGETYLGIQIFRFYFKCT+CSAELTMKTDPQNSDY+VESGATRNFEPWRAEDE  D+
Sbjct: 61  EDVIGETYLGIQIFRFYFKCTRCSAELTMKTDPQNSDYVVESGATRNFEPWRAEDEETDE 120

Query: 121 MKEKREAEEVGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVDEMLAALQRTX 180
           MK+KREAEE+GDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSV EML ALQRT 
Sbjct: 121 MKKKREAEEMGDAMKSLENRTLDSKREMDILAALDEMKSMKSRHATVSVAEMLVALQRTA 180

Query: 181 XXXXXXXXXXXXXXIKSVIFNNSEGYVKRVHDEDIESDEEFAQVSDVHGETSNYNPKRQ 239
                         IKS+  N SE  + R+ DEDIE +EE  Q S+ HGETSN NPK Q
Sbjct: 181 ADKEKRIEEEDEALIKSIFSNKSEVPISRIRDEDIEDEEELFQFSNGHGETSNDNPKIQ 239


>Medtr1g093770.1 | coiled-coil protein | HC | chr1:42080139-42076240
           | 20130731
          Length = 312

 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 15/171 (8%)

Query: 8   NKYYPPDFDP------------AKLPRARRPKNQQIKVRMMLPMSIRCNTCGNYIYKGTK 55
           N Y+PP++DP            A   RAR+     + +R  +P +I C  C + I KG +
Sbjct: 11  NFYFPPEWDPSQGSLNKFHGQHALRERARKLDQGILIIRFEMPYNIWCGGCNSMIAKGVR 70

Query: 56  FNSRKEDCIGETYLGIQIFRFYFKCTKCSAELTMKTDPQNSDYIVESGATRNFEPWRAED 115
           FN+ K+  +G  Y   +I+ F  K   C  E+T++TDP+N +Y++  GA +  E +  ED
Sbjct: 71  FNAEKKQ-VG-NYYSTKIWSFTMKAACCRQEITIQTDPKNCEYVIIGGAQKKTEDFDVED 128

Query: 116 EVADKMKEKREAEEVGDAMKSLENRTLDSKREMDILAALDEMKSMK-SRHA 165
               ++    E  ++ D    LE++  D K++      L  ++ M  +RH+
Sbjct: 129 AETFELPADEERGKLADPFYRLEHQEEDLKKKKQAEPVLVRLQRMSDARHS 179