Miyakogusa Predicted Gene
- Lj0g3v0109419.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0109419.1 tr|B9N1H2|B9N1H2_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_743006
PE=4,30.77,1e-17,seg,NULL,CUFF.6285.1
(285 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g079270.1 | ubiquitin-conjugating enzyme | LC | chr2:33360... 129 2e-30
Medtr1g092465.1 | ubiquitin-conjugating enzyme | HC | chr1:41439... 95 1e-19
Medtr2g079280.1 | ubiquitin-conjugating enzyme | HC | chr2:33367... 91 1e-18
Medtr8g060700.1 | ubiquitin-conjugating enzyme | HC | chr8:21227... 91 2e-18
Medtr8g060700.4 | ubiquitin-conjugating enzyme | HC | chr8:21227... 91 2e-18
Medtr8g060700.2 | ubiquitin-conjugating enzyme | HC | chr8:21227... 91 2e-18
Medtr8g060700.3 | ubiquitin-conjugating enzyme | HC | chr8:21227... 91 2e-18
Medtr7g023760.1 | ubiquitin-conjugating enzyme | LC | chr7:77637... 86 5e-17
Medtr0274s0030.1 | ubiquitin-conjugating enzyme | HC | scaffold0... 85 1e-16
Medtr1g092460.1 | ubiquitin-conjugating enzyme | HC | chr1:41429... 84 2e-16
Medtr4g007210.1 | ubiquitin-conjugating enzyme | LC | chr4:10040... 79 7e-15
Medtr6g034320.1 | hypothetical protein | LC | chr6:11718612-1172... 61 1e-09
Medtr4g088835.1 | ubiquitin-conjugating enzyme E2 | HC | chr4:35... 54 2e-07
Medtr2g013650.1 | ubiquitin-conjugating enzyme E2 | HC | chr2:37... 53 3e-07
Medtr1g092440.1 | P-loop nucleoside triphosphate hydrolase super... 50 3e-06
Medtr4g020620.1 | ubiquitin-conjugating enzyme E2 | HC | chr4:66... 49 4e-06
Medtr4g020620.2 | ubiquitin-conjugating enzyme E2 | HC | chr4:66... 49 4e-06
Medtr4g020620.4 | ubiquitin-conjugating enzyme E2 | HC | chr4:66... 49 4e-06
>Medtr2g079270.1 | ubiquitin-conjugating enzyme | LC |
chr2:33360067-33365279 | 20130731
Length = 645
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 146/330 (44%), Gaps = 58/330 (17%)
Query: 3 DPDVFEIPPPTHF-TPRFXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXGEKESKSDKGKA 61
DPDV EIPPP H TP F GE K KGKA
Sbjct: 2 DPDVVEIPPPIHQDTPPFKRKKKRP--IVHDVIDIDDDDNDDDDLMIIGEINRKRHKGKA 59
Query: 62 IASGYDGYVDHQIV-------------------------------------ENDNIMGIA 84
+ + ++GY D Q+V N++ + +
Sbjct: 60 LETIHEGYGDQQVVPGMEKVGTVSGIQSFNSQPAVSHNSINVEGQGSGPSLANNDYLDMF 119
Query: 85 SDSFMDVDEYALLLEAQFDNEDMPPGIEAPFNWLSKTGNSTVVSSNLQIKMDNVGRYSGT 144
+D++MDVDEYALL +AQFDN D+P GIEAPF L K + SS K +
Sbjct: 120 TDNYMDVDEYALL-QAQFDNVDLPTGIEAPFTLLPKPFHGKAKSSFFGSKKQDFADNPDA 178
Query: 145 ELSPQLFSQAAPNKKKSATSQRSGRDL------NLSLGKESFKSYWPSKFSASENHGSVD 198
P F Q KK + +S + + LG ES ++ S +H
Sbjct: 179 MKLP-YFGQFESAKKGAGSSSSFHSNFNGHNGSSYLLGMESGNPWFKS------SHNINA 231
Query: 199 NPDAM----KLPQAARDGNKRKALDHPVLAKSDDDSNEILRKFPSFKQFDTVEDAADHHF 254
P+ + + ++AR G A+ + + NE LRK SFKQFDTV D +DH+F
Sbjct: 232 TPEHLFGESSVLKSARAGCDGAAVVPSGFTVTHEPENETLRKLRSFKQFDTVTDTSDHYF 291
Query: 255 FQRNSSLKQNPKKWAKKIQDDWKILEKDLP 284
+ N S+KQNPK WAKKIQ++W+ILE+ LP
Sbjct: 292 IKNNCSVKQNPKSWAKKIQEEWRILEEHLP 321
>Medtr1g092465.1 | ubiquitin-conjugating enzyme | HC |
chr1:41439994-41443331 | 20130731
Length = 459
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 116/316 (36%), Gaps = 95/316 (30%)
Query: 3 DPDVFEIPPPTHFTPRFXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXGEKESKSDKGKAI 62
D DV EIPPPTH P GE K KGKA+
Sbjct: 2 DSDVVEIPPPTHKHPPRFKRHKKHSIVHDVIDIFDNSDNDDDDLMVLGEISRKRSKGKAL 61
Query: 63 ASGYDGYVDHQIVENDNIMGIASDSFMDVDEYALLLEAQFDNEDMPPGIEAPFNWLSKTG 122
+ +GY D Q+V + K G
Sbjct: 62 EAIREGYCDQQVVP----------------------------------------VMVKNG 81
Query: 123 NSTVVS-SNLQ-------IKMDNVG---RYSGTELSPQLFSQAAPNKKKSATSQRSGRDL 171
+V+ SN Q I +D+ G G +L S AAP+KK S S GRDL
Sbjct: 82 TVSVIQPSNDQPSVSHDVINVDSYGSDPSLFGISFGTKLSSMAAPSKKISQASPCFGRDL 141
Query: 172 NLSLGKE---------SFKSYWPSKFSASENHGSVDNPDAMKLPQA-------------- 208
+ S G E SF S S FS S+N G D+PDAMKLP
Sbjct: 142 SNSSGVESSKSLQFMKSFHSKVKSAFSGSKNCGLADSPDAMKLPHGESGSPWFKSSHYID 201
Query: 209 ARDGNKRKALDHPVLAKSDDDSNEILRKFPSFKQFDTVEDAADHHFFQRNSSLKQNPKKW 268
A G A+ P L +D+ NE LRK SFKQFDT
Sbjct: 202 ATPGRNGAAVVLPDLTITDEPENETLRKLQSFKQFDT---------------------SC 240
Query: 269 AKKIQDDWKILEKDLP 284
AKKIQ++W+ILEK LP
Sbjct: 241 AKKIQEEWRILEKHLP 256
>Medtr2g079280.1 | ubiquitin-conjugating enzyme | HC |
chr2:33367798-33371041 | 20130731
Length = 311
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 53/72 (73%)
Query: 213 NKRKALDHPVLAKSDDDSNEILRKFPSFKQFDTVEDAADHHFFQRNSSLKQNPKKWAKKI 272
++RK P L +D+ NE LRK SFKQFDTV D +DH+F + NSS+KQNPK WAKKI
Sbjct: 67 SRRKRAAAPGLTITDEPENETLRKLRSFKQFDTVTDTSDHYFNKSNSSMKQNPKSWAKKI 126
Query: 273 QDDWKILEKDLP 284
Q++WKILE+ P
Sbjct: 127 QEEWKILEEHFP 138
>Medtr8g060700.1 | ubiquitin-conjugating enzyme | HC |
chr8:21227881-21220856 | 20130731
Length = 757
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 56/76 (73%)
Query: 209 ARDGNKRKALDHPVLAKSDDDSNEILRKFPSFKQFDTVEDAADHHFFQRNSSLKQNPKKW 268
ARDGN D V+A SD+ +EIL+KF +FKQFDT++D +DH++ + SS +Q+ K W
Sbjct: 441 ARDGNNGPTADSTVVAISDEARDEILKKFQNFKQFDTIDDTSDHYYLHKTSSTEQHSKNW 500
Query: 269 AKKIQDDWKILEKDLP 284
K+IQ++WK LEKDLP
Sbjct: 501 VKRIQEEWKSLEKDLP 516
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 97/264 (36%), Gaps = 105/264 (39%)
Query: 50 GEKESKSDKGKAIASGYDGYVDHQIVEN-DNIM------------------GIASDS--- 87
GEK +KGK I S ++ Y DHQ +E+ DNI G AS S
Sbjct: 91 GEKVVNCNKGKTIDSVHNDYGDHQTMEDFDNIYYPPVIDKSGPSSWVESSNGYASASKNL 150
Query: 88 ----------------------------FMDVDEYALLLEAQFDNEDMPPGIEAPFNWLS 119
+MDVD Y LL E FDN ++PPGIEAP WL
Sbjct: 151 ISIDEQGSDHSYDDDDDDDDLSDLFMDDYMDVDNYTLLQE-HFDNANIPPGIEAPVPWLK 209
Query: 120 ---------------------------------------------KTGNSTVVSSNLQIK 134
+T + S+++Q K
Sbjct: 210 DYDLGSKKPESSLFHPSFHIPQSDSKNCQGSGLFQPTWSLEPIKPETQEPSAGSTSVQSK 269
Query: 135 MDNVGRYSGTELSPQLFSQAAPNKKKSATSQRSGRDLNLSLGKESFKSYW---------P 185
++++ S +L P LFSQ+ P+ KK Q R L L +G ES S P
Sbjct: 270 VESIDHPSKIQLPPPLFSQSVPSMKKFDAGQSRRRKLKLPVGVESSTSNLFSGPSGFKKP 329
Query: 186 SKFSASENHGSVDNPDAMKLPQAA 209
F +S N S+ N +AMKLP
Sbjct: 330 YVFGSSTNFSSLGNSEAMKLPHVG 353
>Medtr8g060700.4 | ubiquitin-conjugating enzyme | HC |
chr8:21227881-21222521 | 20130731
Length = 678
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 56/76 (73%)
Query: 209 ARDGNKRKALDHPVLAKSDDDSNEILRKFPSFKQFDTVEDAADHHFFQRNSSLKQNPKKW 268
ARDGN D V+A SD+ +EIL+KF +FKQFDT++D +DH++ + SS +Q+ K W
Sbjct: 441 ARDGNNGPTADSTVVAISDEARDEILKKFQNFKQFDTIDDTSDHYYLHKTSSTEQHSKNW 500
Query: 269 AKKIQDDWKILEKDLP 284
K+IQ++WK LEKDLP
Sbjct: 501 VKRIQEEWKSLEKDLP 516
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 97/264 (36%), Gaps = 105/264 (39%)
Query: 50 GEKESKSDKGKAIASGYDGYVDHQIVEN-DNIM------------------GIASDS--- 87
GEK +KGK I S ++ Y DHQ +E+ DNI G AS S
Sbjct: 91 GEKVVNCNKGKTIDSVHNDYGDHQTMEDFDNIYYPPVIDKSGPSSWVESSNGYASASKNL 150
Query: 88 ----------------------------FMDVDEYALLLEAQFDNEDMPPGIEAPFNWLS 119
+MDVD Y LL E FDN ++PPGIEAP WL
Sbjct: 151 ISIDEQGSDHSYDDDDDDDDLSDLFMDDYMDVDNYTLLQE-HFDNANIPPGIEAPVPWLK 209
Query: 120 ---------------------------------------------KTGNSTVVSSNLQIK 134
+T + S+++Q K
Sbjct: 210 DYDLGSKKPESSLFHPSFHIPQSDSKNCQGSGLFQPTWSLEPIKPETQEPSAGSTSVQSK 269
Query: 135 MDNVGRYSGTELSPQLFSQAAPNKKKSATSQRSGRDLNLSLGKESFKSYW---------P 185
++++ S +L P LFSQ+ P+ KK Q R L L +G ES S P
Sbjct: 270 VESIDHPSKIQLPPPLFSQSVPSMKKFDAGQSRRRKLKLPVGVESSTSNLFSGPSGFKKP 329
Query: 186 SKFSASENHGSVDNPDAMKLPQAA 209
F +S N S+ N +AMKLP
Sbjct: 330 YVFGSSTNFSSLGNSEAMKLPHVG 353
>Medtr8g060700.2 | ubiquitin-conjugating enzyme | HC |
chr8:21227881-21220856 | 20130731
Length = 678
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 56/76 (73%)
Query: 209 ARDGNKRKALDHPVLAKSDDDSNEILRKFPSFKQFDTVEDAADHHFFQRNSSLKQNPKKW 268
ARDGN D V+A SD+ +EIL+KF +FKQFDT++D +DH++ + SS +Q+ K W
Sbjct: 441 ARDGNNGPTADSTVVAISDEARDEILKKFQNFKQFDTIDDTSDHYYLHKTSSTEQHSKNW 500
Query: 269 AKKIQDDWKILEKDLP 284
K+IQ++WK LEKDLP
Sbjct: 501 VKRIQEEWKSLEKDLP 516
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 97/264 (36%), Gaps = 105/264 (39%)
Query: 50 GEKESKSDKGKAIASGYDGYVDHQIVEN-DNIM------------------GIASDS--- 87
GEK +KGK I S ++ Y DHQ +E+ DNI G AS S
Sbjct: 91 GEKVVNCNKGKTIDSVHNDYGDHQTMEDFDNIYYPPVIDKSGPSSWVESSNGYASASKNL 150
Query: 88 ----------------------------FMDVDEYALLLEAQFDNEDMPPGIEAPFNWLS 119
+MDVD Y LL E FDN ++PPGIEAP WL
Sbjct: 151 ISIDEQGSDHSYDDDDDDDDLSDLFMDDYMDVDNYTLLQE-HFDNANIPPGIEAPVPWLK 209
Query: 120 ---------------------------------------------KTGNSTVVSSNLQIK 134
+T + S+++Q K
Sbjct: 210 DYDLGSKKPESSLFHPSFHIPQSDSKNCQGSGLFQPTWSLEPIKPETQEPSAGSTSVQSK 269
Query: 135 MDNVGRYSGTELSPQLFSQAAPNKKKSATSQRSGRDLNLSLGKESFKSYW---------P 185
++++ S +L P LFSQ+ P+ KK Q R L L +G ES S P
Sbjct: 270 VESIDHPSKIQLPPPLFSQSVPSMKKFDAGQSRRRKLKLPVGVESSTSNLFSGPSGFKKP 329
Query: 186 SKFSASENHGSVDNPDAMKLPQAA 209
F +S N S+ N +AMKLP
Sbjct: 330 YVFGSSTNFSSLGNSEAMKLPHVG 353
>Medtr8g060700.3 | ubiquitin-conjugating enzyme | HC |
chr8:21227881-21220856 | 20130731
Length = 668
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 56/76 (73%)
Query: 209 ARDGNKRKALDHPVLAKSDDDSNEILRKFPSFKQFDTVEDAADHHFFQRNSSLKQNPKKW 268
ARDGN D V+A SD+ +EIL+KF +FKQFDT++D +DH++ + SS +Q+ K W
Sbjct: 441 ARDGNNGPTADSTVVAISDEARDEILKKFQNFKQFDTIDDTSDHYYLHKTSSTEQHSKNW 500
Query: 269 AKKIQDDWKILEKDLP 284
K+IQ++WK LEKDLP
Sbjct: 501 VKRIQEEWKSLEKDLP 516
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 97/264 (36%), Gaps = 105/264 (39%)
Query: 50 GEKESKSDKGKAIASGYDGYVDHQIVEN-DNIM------------------GIASDS--- 87
GEK +KGK I S ++ Y DHQ +E+ DNI G AS S
Sbjct: 91 GEKVVNCNKGKTIDSVHNDYGDHQTMEDFDNIYYPPVIDKSGPSSWVESSNGYASASKNL 150
Query: 88 ----------------------------FMDVDEYALLLEAQFDNEDMPPGIEAPFNWLS 119
+MDVD Y LL E FDN ++PPGIEAP WL
Sbjct: 151 ISIDEQGSDHSYDDDDDDDDLSDLFMDDYMDVDNYTLLQE-HFDNANIPPGIEAPVPWLK 209
Query: 120 ---------------------------------------------KTGNSTVVSSNLQIK 134
+T + S+++Q K
Sbjct: 210 DYDLGSKKPESSLFHPSFHIPQSDSKNCQGSGLFQPTWSLEPIKPETQEPSAGSTSVQSK 269
Query: 135 MDNVGRYSGTELSPQLFSQAAPNKKKSATSQRSGRDLNLSLGKESFKSYW---------P 185
++++ S +L P LFSQ+ P+ KK Q R L L +G ES S P
Sbjct: 270 VESIDHPSKIQLPPPLFSQSVPSMKKFDAGQSRRRKLKLPVGVESSTSNLFSGPSGFKKP 329
Query: 186 SKFSASENHGSVDNPDAMKLPQAA 209
F +S N S+ N +AMKLP
Sbjct: 330 YVFGSSTNFSSLGNSEAMKLPHVG 353
>Medtr7g023760.1 | ubiquitin-conjugating enzyme | LC |
chr7:7763773-7762143 | 20130731
Length = 313
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 48/62 (77%)
Query: 223 LAKSDDDSNEILRKFPSFKQFDTVEDAADHHFFQRNSSLKQNPKKWAKKIQDDWKILEKD 282
+ +D +E LRK SFKQFDTV D +DHH+ ++NSS+K NPK WAKKIQ++W+ILEK
Sbjct: 44 MKATDKPESETLRKLQSFKQFDTVIDISDHHYIKKNSSMKHNPKNWAKKIQEEWRILEKH 103
Query: 283 LP 284
LP
Sbjct: 104 LP 105
>Medtr0274s0030.1 | ubiquitin-conjugating enzyme | HC |
scaffold0274:18861-16641 | 20130731
Length = 364
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 223 LAKSDDDSNEILRKFPSFKQFDTVEDAADHHFFQRNSSLKQNPKKWAKKIQDDWKILEKD 282
L +D+ NE LRK SFKQFDT+ D +DH+F + +SS+ QNPK WAKKIQ++WKILE
Sbjct: 67 LTITDEPENETLRKLGSFKQFDTISDTSDHYFIKSHSSMAQNPKSWAKKIQEEWKILENH 126
Query: 283 LP 284
+P
Sbjct: 127 VP 128
>Medtr1g092460.1 | ubiquitin-conjugating enzyme | HC |
chr1:41429044-41433781 | 20130731
Length = 433
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 49/64 (76%)
Query: 221 PVLAKSDDDSNEILRKFPSFKQFDTVEDAADHHFFQRNSSLKQNPKKWAKKIQDDWKILE 280
P L +D+ NE L+K SFKQFD V D++DH+F + +SS+KQNPK WAKK+Q+ WK+LE
Sbjct: 128 PGLTITDEPENETLKKLRSFKQFDAVADSSDHYFIKNHSSMKQNPKSWAKKVQEQWKMLE 187
Query: 281 KDLP 284
+ LP
Sbjct: 188 EHLP 191
>Medtr4g007210.1 | ubiquitin-conjugating enzyme | LC |
chr4:1004020-1007450 | 20130731
Length = 394
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 231 NEILRKFPSFKQFDTVEDAADHHFFQRNSSLKQNPKKWAKKIQDDWKILEKDLP 284
+EI +KFPSFKQFD V DA+DHHF + L Q+P W+ IQ+DW+ILEKDLP
Sbjct: 42 DEIFKKFPSFKQFDFVNDASDHHFIHKKCPLNQHPNNWSDAIQEDWEILEKDLP 95
>Medtr6g034320.1 | hypothetical protein | LC |
chr6:11718612-11720345 | 20130731
Length = 282
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 62/156 (39%), Gaps = 50/156 (32%)
Query: 131 LQIKMDNVGRYSGTELSPQLFSQAAPNKKKSATSQRSGRDLNLSLGKESFKSYWPSKFSA 190
L I + VG+ S + ++ Q P++ +S SQ GR LNLS G E+ KS
Sbjct: 46 LVIIGEKVGK-SNKRKAVEVTHQVEPSQVESVASQHIGRGLNLSAGVETSKS-------- 96
Query: 191 SENHGSVDNPDAMKLPQAARDGNKRKALDHPVLAKSDDDSNEILRKFPSFKQFDTVEDA- 249
RKF SFKQFD + D
Sbjct: 97 ----------------------------------------ESFTRKFQSFKQFDIISDYD 116
Query: 250 ADHHFFQRNSSLKQNPKKWAKKIQDDWKILEKDLPG 285
DHH+ SS+ WAK IQ +WKILE+ LPG
Sbjct: 117 YDHHYASEMSSMTPRTNNWAKVIQKEWKILEESLPG 152
>Medtr4g088835.1 | ubiquitin-conjugating enzyme E2 | HC |
chr4:35439892-35444232 | 20130731
Length = 914
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 240 FKQFDTVEDAA-DHHFFQ--RNSSLKQNPKKWAKKIQDDWKILEKDLP 284
FKQFD +E+ + DHHFF R S Q K W KK+Q +W ILEK LP
Sbjct: 639 FKQFDVIENCSEDHHFFDEGRGLSTLQVKKGWVKKVQQEWSILEKSLP 686
>Medtr2g013650.1 | ubiquitin-conjugating enzyme E2 | HC |
chr2:3700846-3696726 | 20130731
Length = 924
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 240 FKQFDTVEDAADHHFFQRNSSL--KQNPKKWAKKIQDDWKILEKDLP 284
K+FD ++ DHHFF L Q K WAKK+Q +W ILEK+LP
Sbjct: 650 LKRFDVIDTCLDHHFFNERKGLPISQVKKDWAKKVQQEWSILEKNLP 696
>Medtr1g092440.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr1:41419966-41427313 |
20130731
Length = 626
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 30/79 (37%)
Query: 223 LAKSDDDSNEILRKFPSFKQFDTVEDAADHHFFQRNSSL--------------------- 261
L +D+ NE LRK SFKQFDT+ D +DH+F + +SS+
Sbjct: 289 LTITDEPENETLRKLGSFKQFDTISDTSDHYFIKSHSSMAYVSFSKQNLLKAYIVSALIL 348
Query: 262 ---------KQNPKKWAKK 271
+QNPK WAKK
Sbjct: 349 IIWICILFSEQNPKSWAKK 367
>Medtr4g020620.1 | ubiquitin-conjugating enzyme E2 | HC |
chr4:6602712-6607846 | 20130731
Length = 879
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Query: 240 FKQFDTVEDAADHHFFQRNSSLKQNPKKWAKKIQDDWKILEKDLP 284
K+FD ++ +DHHFF WAKK+Q +W ILEK+LP
Sbjct: 605 LKRFDVIDTCSDHHFFNERKGY------WAKKVQQEWSILEKNLP 643
>Medtr4g020620.2 | ubiquitin-conjugating enzyme E2 | HC |
chr4:6602463-6606968 | 20130731
Length = 748
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Query: 240 FKQFDTVEDAADHHFFQRNSSLKQNPKKWAKKIQDDWKILEKDLP 284
K+FD ++ +DHHFF WAKK+Q +W ILEK+LP
Sbjct: 547 LKRFDVIDTCSDHHFFNERKGY------WAKKVQQEWSILEKNLP 585
>Medtr4g020620.4 | ubiquitin-conjugating enzyme E2 | HC |
chr4:6602463-6606968 | 20130731
Length = 748
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Query: 240 FKQFDTVEDAADHHFFQRNSSLKQNPKKWAKKIQDDWKILEKDLP 284
K+FD ++ +DHHFF WAKK+Q +W ILEK+LP
Sbjct: 547 LKRFDVIDTCSDHHFFNERKGY------WAKKVQQEWSILEKNLP 585