Miyakogusa Predicted Gene

Lj0g3v0109069.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0109069.1 Non Characterized Hit- tr|O80445|O80445_ARATH
Putative uncharacterized protein At2g38200
OS=Arabidop,40.88,8e-19,zf-C3HC4_3,NULL,gene.g8238.t1.1
         (246 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g463920.1 | ubiquitin-protein ligase, putative | HC | chr3...   244   4e-65
Medtr7g068580.1 | ubiquitin-protein ligase, putative | HC | chr7...   209   2e-54
Medtr1g018650.1 | ubiquitin-protein ligase, putative | HC | chr1...   102   3e-22

>Medtr3g463920.1 | ubiquitin-protein ligase, putative | HC |
           chr3:25649684-25653834 | 20130731
          Length = 387

 Score =  244 bits (624), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 127/222 (57%), Positives = 157/222 (70%), Gaps = 18/222 (8%)

Query: 8   GRESLVEWTQDPSFPNATLYWNTIYGSGSITQKISHSYTYYVAVSNMNPESVEVELNFIV 67
           GRESL++W +DP FPNATLYWN IYGSGSI+QKIS+S TYYVA+ NM P++V+VEL FIV
Sbjct: 174 GRESLIKWKEDPLFPNATLYWNNIYGSGSISQKISYSSTYYVAIGNMKPQNVKVELKFIV 233

Query: 68  NSFLYNTTNTSHRCSLDNGLCRLSFMYLESNTALLTTPGPGEGVSDEEWFDVKVSYEPRW 127
           N+ LYNTT +  +CSLDNGLCRL+   L +N ALLTTPGP EG S  EWFDV VSYEPRW
Sbjct: 234 NALLYNTTGSYKKCSLDNGLCRLN-PALSANIALLTTPGPIEGASKNEWFDVNVSYEPRW 292

Query: 128 IIYLTGSGVMAVLIFFAMRFCKVFQISSEERARFQQAEVLSERTPFLLPGKNNH------ 181
           IIY  G GV+ V I  +++F K F  ++EE ARF+Q EV+SER P L    +++      
Sbjct: 293 IIYFAGLGVLIVQILSSIKFYKTFLTNNEENARFEQVEVISERAPLLSRKDSDNSSWCSS 352

Query: 182 YESFSNEEEDLTMWLEENSVEGKQVIKGETSNDLQFLCVICF 223
           Y SFS+          ENS EGK +I+GET   L+ L V+ F
Sbjct: 353 YNSFSS----------ENSDEGKSIIEGETK-LLKKLAVVPF 383


>Medtr7g068580.1 | ubiquitin-protein ligase, putative | HC |
           chr7:25129211-25135611 | 20130731
          Length = 447

 Score =  209 bits (533), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 106/243 (43%), Positives = 155/243 (63%), Gaps = 7/243 (2%)

Query: 8   GRESLVEWTQDPSFPNATLYWNTIYGSGSITQKISHSYTYYVAVSNMNPESVEVELNFIV 67
           G +SL  W QD ++PN TL WN I G+G ITQKI  S +YYVA+ N+  E V+VELN  V
Sbjct: 184 GAQSLSLWLQDLTYPNTTLSWNVIRGTGVITQKIFRSSSYYVALGNLE-EEVKVELNLTV 242

Query: 68  NSFLYNTTNTSHRCSLDNGLCRLSFMYLESNTALLTTPGPGEGVSDEEWFDVKVSYEPRW 127
            +FL+NTT   ++C+L    C ++  +   +TA+L +P P +  S++EW+ VK++Y PRW
Sbjct: 243 RAFLHNTTKAYYKCALTGSPCSMNIFFPHGSTAVLVSPAPQQNTSNDEWY-VKLTYGPRW 301

Query: 128 IIYLTGSGVMAVLIFFAMRFCKVFQISSEERARFQQAEVLSERTPFLLP----GKNNHYE 183
           + Y+ G G++ +++F+A  F    Q S ++R   +      +R PFL       + + Y+
Sbjct: 302 LTYIIGIGILTLIMFWAFNFFNKLQCSHDDRVGSRSEGTGPDRAPFLSRKDDLSRGSSYD 361

Query: 184 SFSNEEEDLTMWLEENSVEGKQVIKGETSNDLQFLCVICFETPRDCFFLPCGHCAACFAC 243
           S   ++EDL  ++   S +GK +  GETSN+ Q LC ICF+ PRDCFFLPCGHC ACFAC
Sbjct: 362 SLPEDDEDLN-FVAGGSTDGKILGDGETSNNTQRLCAICFDAPRDCFFLPCGHCVACFAC 420

Query: 244 GTR 246
           G+R
Sbjct: 421 GSR 423


>Medtr1g018650.1 | ubiquitin-protein ligase, putative | HC |
           chr1:5422995-5420514 | 20130731
          Length = 401

 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 18/200 (9%)

Query: 47  YYVAVSNMNPESVEVELNFIVNSFLYNTTNTSHRCSLDNGLCRLSFMYLESNTALLTTPG 106
           Y + + NMN  ++ + L+  V++ +Y+TT  +++CS  NG C+L   +  +   +LT P 
Sbjct: 184 YQIGILNMNARNIILTLHINVSAKIYDTTKATNKCSTRNGSCKLDLFFPITYYLVLTAPK 243

Query: 107 PGEGVSDEEWFDVKVSYEPRWIIYLTGSGVMAVLIFFAMRFCKVFQISSEERARFQQAEV 166
            G    D+ WF V++S+  R   Y+   GV  ++IF  +   K       E     +A+ 
Sbjct: 244 NGND-DDDAWF-VEISFMARVFSYIILLGVFMIVIFMIL---KCLGADYGEIHNVAEAQE 298

Query: 167 LSERTPFLLPGKNNHYESFSNEEEDLTMWLEENSVEGKQVIKGETSNDLQFLCVICFETP 226
           ++E  P + P    +  +  +E+E+    + E   + K             LC+ICF+  
Sbjct: 299 VTETEPLMQPNPVTYGTNIFHEKEETNSDVSEELYDEK-------------LCIICFDEQ 345

Query: 227 RDCFFLPCGHCAACFACGTR 246
           R+CFF+PCGHCA C+ C  R
Sbjct: 346 RNCFFVPCGHCATCYDCAQR 365