Miyakogusa Predicted Gene

Lj0g3v0109039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0109039.1 Non Characterized Hit- tr|D8SB58|D8SB58_SELML
Putative uncharacterized protein OS=Selaginella
moelle,29.32,1e-18,ZINC_FINGER_C2H2_2,Zinc finger, C2H2;
ZINC_FINGER_C2H2_1,Zinc finger, C2H2; zinc finger,Zinc
finger,,NODE_32921_length_992_cov_152.976822.path2.1
         (286 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g015930.1 | C2H2 type zinc finger protein | HC | chr1:4124...   458   e-129
Medtr1g019050.1 | NYN domain protein | HC | chr1:5659533-5662682...   221   4e-58
Medtr3g084750.3 | C2H2 type zinc finger protein | HC | chr3:3827...   209   2e-54
Medtr3g084750.2 | C2H2 type zinc finger protein | HC | chr3:3827...   209   2e-54
Medtr3g084750.1 | C2H2 type zinc finger protein | HC | chr3:3827...   209   3e-54

>Medtr1g015930.1 | C2H2 type zinc finger protein | HC |
           chr1:4124578-4122613 | 20130731
          Length = 360

 Score =  458 bits (1179), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 218/286 (76%), Positives = 243/286 (84%), Gaps = 5/286 (1%)

Query: 6   KTGSYAAKQNKVVVLWDLDNKPPRGPPYHAAVSLKTLAESFGDVVDISAYANRHAFIHLP 65
           K G+Y  KQNKV VLWDLDNKPPRGPPY+AAVSLK LAE FGDV DISAYANRHAFIHLP
Sbjct: 44  KQGTYEQKQNKVCVLWDLDNKPPRGPPYNAAVSLKNLAERFGDVTDISAYANRHAFIHLP 103

Query: 66  QWVLHERRQRKTTDILEKKGIVTPSDPYVCTVCGRKCKTNLDLKKHFKQLHQRERQKKLN 125
           QWVL++RR+RK  DILE+KGI+ P +PYVC+VCGRKCKTN+DLKKHFKQLHQRERQKKLN
Sbjct: 104 QWVLNQRRERKNLDILERKGIINPPEPYVCSVCGRKCKTNVDLKKHFKQLHQRERQKKLN 163

Query: 126 RMNSLKGKKRQRFKERFIRGNHKYNEAARTLVTPKVGYGLASELRRAGVFVKTVEDKPQA 185
           R+NSLKGKKRQ++KERF+ G+ KYN+A R ++ PKVGYGLASELRRAGVFVKTVEDKPQA
Sbjct: 164 RLNSLKGKKRQKYKERFVSGDDKYNDAVREILKPKVGYGLASELRRAGVFVKTVEDKPQA 223

Query: 186 ADWALKRQMQHSMSRGIDWLFLVSDDSDFSEMLKRAREANLGTVVVGDADRALGQHADFW 245
           ADWALK+QM HSMSRGIDWLFLVSDDSDFSEML++AREANLGTVVVGD DRALG+HAD W
Sbjct: 224 ADWALKKQMMHSMSRGIDWLFLVSDDSDFSEMLRKAREANLGTVVVGDVDRALGRHADLW 283

Query: 246 VPWIAVEKGEVSEMDL-----KNXXXXXXXXXXXDSPDGLFFNEGD 286
           VPW AVE GEV +MDL                  D  D LFF+EG+
Sbjct: 284 VPWNAVENGEVMDMDLIPRNRDRRRTNSTSTTMDDFGDVLFFHEGE 329


>Medtr1g019050.1 | NYN domain protein | HC | chr1:5659533-5662682 |
           20130731
          Length = 319

 Score =  221 bits (564), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 124/249 (49%), Positives = 160/249 (64%), Gaps = 28/249 (11%)

Query: 16  KVVVLWDLDNKPPRGPPYHAAVSLKTLAESFGDVVDISAYANRHAFIHLPQWVLHERRQR 75
           KV++LWDLDNKPP GPPY+AA+SLKT AE FGDVV ISAY  RH+F +            
Sbjct: 59  KVIILWDLDNKPPHGPPYNAALSLKTFAERFGDVVSISAYTKRHSFFN------------ 106

Query: 76  KTTDILEKKGIVTPSDPYVCTVCGRKCKTNLDLKKHFKQLHQRERQKKLNRMNSLKGKKR 135
                L         + ++C VCG +C++  D+  HFK++H+ +++K LNR+ S+K K  
Sbjct: 107 -----LPLWNPNPNPNSFLCRVCGYECRSLTDVNIHFKRVHEYQKRKTLNRLKSIKLK-- 159

Query: 136 QRFKERFIRGNHKYNEAARTLVTPKVGYGLASELRRAGVFVK--TVEDKPQAADWALKRQ 193
            R K  FIR  H+YNEA       KVG+G+ASELRR GVFVK  TV  K +AAD +LKR+
Sbjct: 160 -RSKVNFIRKVHRYNEAKSNNAPLKVGFGMASELRRGGVFVKIVTVRGKVKAADSSLKRE 218

Query: 194 MQHSMSRGID--WLFLVSDDSDFSEMLKRAREANLGTVVVGDA-DRALGQHADFWVPWIA 250
           M   MS G+D   L LVSDDS FS+ML++ RE  + TVVVGD   R LG++AD W+PWI 
Sbjct: 219 M---MSGGVDSLVLVLVSDDSVFSKMLRKVREVKVETVVVGDYWGRDLGRNADLWLPWIL 275

Query: 251 VEKGEVSEM 259
           VE G V  +
Sbjct: 276 VENGNVEYL 284


>Medtr3g084750.3 | C2H2 type zinc finger protein | HC |
           chr3:38276583-38272141 | 20130731
          Length = 411

 Score =  209 bits (533), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 114/247 (46%), Positives = 157/247 (63%), Gaps = 4/247 (1%)

Query: 13  KQNKVVVLWDLDNKPPRG-PPYHAAVSLKTLAESFGDVVDISAYANRHAFIHLPQWVLHE 71
           K  +V + WDLDNKPP   PPY  A  L+  A SFG V  + AYAN H F ++P  V   
Sbjct: 92  KLCRVGLFWDLDNKPPNSIPPYEVANKLRIAAASFGVVRHMVAYANSHTFSNVPHIVRER 151

Query: 72  RRQRKTTDILEKKGIVTPSDPYVCTVCGRKCKTNLDLKKHFKQLHQRERQKKLNRMNSLK 131
           R++R+    LE KG++  ++P+VC VCGRK  TN  L  HFKQLH+RE  K+LNR+ S +
Sbjct: 152 RKERELLYRLEDKGVIKRNEPHVCRVCGRKFYTNEKLVNHFKQLHEREHAKRLNRIESAR 211

Query: 132 GKKRQRFKERFIRGNHKYNEAARTLVTPKVGYGLASELRRAGVFVKTVEDKPQAADWALK 191
           G ++ +   ++     KY +AA  ++TPKVGYGLA EL+RAG +V+TV D+PQAAD AL+
Sbjct: 212 GSRKVKLVGQYAMKMEKYKKAASAVLTPKVGYGLADELKRAGFWVQTVLDRPQAADIALQ 271

Query: 192 RQMQHSMS-RGIDWLFLVSDDSDFSEMLKRAREANLGTVVVGD--ADRALGQHADFWVPW 248
           + M   M  R ++ L LVSDDSDF +++K A+   L TVV+GD  +D  L + AD    W
Sbjct: 272 KHMVDMMDHRRVECLVLVSDDSDFVDVIKEAKLRCLKTVVIGDFSSDGVLKRTADTAFSW 331

Query: 249 IAVEKGE 255
             +  G+
Sbjct: 332 EEILMGK 338


>Medtr3g084750.2 | C2H2 type zinc finger protein | HC |
           chr3:38276658-38272494 | 20130731
          Length = 411

 Score =  209 bits (533), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 114/247 (46%), Positives = 157/247 (63%), Gaps = 4/247 (1%)

Query: 13  KQNKVVVLWDLDNKPPRG-PPYHAAVSLKTLAESFGDVVDISAYANRHAFIHLPQWVLHE 71
           K  +V + WDLDNKPP   PPY  A  L+  A SFG V  + AYAN H F ++P  V   
Sbjct: 92  KLCRVGLFWDLDNKPPNSIPPYEVANKLRIAAASFGVVRHMVAYANSHTFSNVPHIVRER 151

Query: 72  RRQRKTTDILEKKGIVTPSDPYVCTVCGRKCKTNLDLKKHFKQLHQRERQKKLNRMNSLK 131
           R++R+    LE KG++  ++P+VC VCGRK  TN  L  HFKQLH+RE  K+LNR+ S +
Sbjct: 152 RKERELLYRLEDKGVIKRNEPHVCRVCGRKFYTNEKLVNHFKQLHEREHAKRLNRIESAR 211

Query: 132 GKKRQRFKERFIRGNHKYNEAARTLVTPKVGYGLASELRRAGVFVKTVEDKPQAADWALK 191
           G ++ +   ++     KY +AA  ++TPKVGYGLA EL+RAG +V+TV D+PQAAD AL+
Sbjct: 212 GSRKVKLVGQYAMKMEKYKKAASAVLTPKVGYGLADELKRAGFWVQTVLDRPQAADIALQ 271

Query: 192 RQMQHSMS-RGIDWLFLVSDDSDFSEMLKRAREANLGTVVVGD--ADRALGQHADFWVPW 248
           + M   M  R ++ L LVSDDSDF +++K A+   L TVV+GD  +D  L + AD    W
Sbjct: 272 KHMVDMMDHRRVECLVLVSDDSDFVDVIKEAKLRCLKTVVIGDFSSDGVLKRTADTAFSW 331

Query: 249 IAVEKGE 255
             +  G+
Sbjct: 332 EEILMGK 338


>Medtr3g084750.1 | C2H2 type zinc finger protein | HC |
           chr3:38274286-38273207 | 20130731
          Length = 359

 Score =  209 bits (531), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 114/247 (46%), Positives = 157/247 (63%), Gaps = 4/247 (1%)

Query: 13  KQNKVVVLWDLDNKPPRG-PPYHAAVSLKTLAESFGDVVDISAYANRHAFIHLPQWVLHE 71
           K  +V + WDLDNKPP   PPY  A  L+  A SFG V  + AYAN H F ++P  V   
Sbjct: 40  KLCRVGLFWDLDNKPPNSIPPYEVANKLRIAAASFGVVRHMVAYANSHTFSNVPHIVRER 99

Query: 72  RRQRKTTDILEKKGIVTPSDPYVCTVCGRKCKTNLDLKKHFKQLHQRERQKKLNRMNSLK 131
           R++R+    LE KG++  ++P+VC VCGRK  TN  L  HFKQLH+RE  K+LNR+ S +
Sbjct: 100 RKERELLYRLEDKGVIKRNEPHVCRVCGRKFYTNEKLVNHFKQLHEREHAKRLNRIESAR 159

Query: 132 GKKRQRFKERFIRGNHKYNEAARTLVTPKVGYGLASELRRAGVFVKTVEDKPQAADWALK 191
           G ++ +   ++     KY +AA  ++TPKVGYGLA EL+RAG +V+TV D+PQAAD AL+
Sbjct: 160 GSRKVKLVGQYAMKMEKYKKAASAVLTPKVGYGLADELKRAGFWVQTVLDRPQAADIALQ 219

Query: 192 RQMQHSMS-RGIDWLFLVSDDSDFSEMLKRAREANLGTVVVGD--ADRALGQHADFWVPW 248
           + M   M  R ++ L LVSDDSDF +++K A+   L TVV+GD  +D  L + AD    W
Sbjct: 220 KHMVDMMDHRRVECLVLVSDDSDFVDVIKEAKLRCLKTVVIGDFSSDGVLKRTADTAFSW 279

Query: 249 IAVEKGE 255
             +  G+
Sbjct: 280 EEILMGK 286