Miyakogusa Predicted Gene

Lj0g3v0108699.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0108699.2 tr|B9IDU8|B9IDU8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_574781 PE=4
SV=1,78,0.000000000000003,seg,NULL; PROTEIN_KINASE_DOM,Protein kinase,
catalytic domain; Pkinase,Protein kinase, catalytic dom,CUFF.6253.2
         (159 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g091290.1 | OBP3-responsive protein | HC | chr3:41511172-4...   266   5e-72

>Medtr3g091290.1 | OBP3-responsive protein | HC |
           chr3:41511172-41517472 | 20130731
          Length = 677

 Score =  266 bits (681), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 128/159 (80%), Positives = 138/159 (86%)

Query: 1   MQVHGYISLPESNDSGSFILVHGYHGSFSLRHWLQRSDWLPTLEATLALDEESVRKIGED 60
           MQVHGYISLP S  SGSFILVHGYHGSFSLRHWLQ+SDWL TLEATLALDEESVRK+GED
Sbjct: 165 MQVHGYISLPASGGSGSFILVHGYHGSFSLRHWLQQSDWLQTLEATLALDEESVRKVGED 224

Query: 61  TTGGPAVSRQXXXXXXXXXXXXXGVNYLHSHGFAHTELRLENVHISPIDRHIKVGILGNA 120
           TTGGPA+SRQ             GVNYLHSHG AHT+LRLENVHISPIDRHIKVG LGNA
Sbjct: 225 TTGGPAISRQLRLIRILMRDLLIGVNYLHSHGLAHTDLRLENVHISPIDRHIKVGTLGNA 284

Query: 121 ADFHVEGSNSGTMDSMDRRQMMIAFDMRCVGFIMAKMVI 159
           ADF  +GSNSG+M++MDRRQMMIAFDMRC+GFIMAKMV+
Sbjct: 285 ADFCEDGSNSGSMENMDRRQMMIAFDMRCMGFIMAKMVM 323