Miyakogusa Predicted Gene
- Lj0g3v0108469.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0108469.1 Non Characterized Hit- tr|I3SJG9|I3SJG9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,83.74,0,Band
7/SPFH domain,NULL; PROHIBITIN,Prohibitin; coiled-coil,NULL; seg,NULL;
prohibitin homologues,Ba,CUFF.6228.1
(246 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g078200.1 | prohibitin complex protein | HC | chr4:3010842... 355 1e-98
Medtr2g090760.1 | prohibitin complex protein | HC | chr2:3891737... 345 2e-95
Medtr2g090760.2 | prohibitin complex protein | HC | chr2:3891714... 345 2e-95
Medtr4g078200.2 | prohibitin complex protein | HC | chr4:3010806... 280 1e-75
Medtr8g046300.1 | prohibitin complex protein | HC | chr8:1813304... 185 4e-47
Medtr3g008250.2 | prohibitin complex protein | HC | chr3:1385511... 184 7e-47
Medtr3g008250.1 | prohibitin complex protein | HC | chr3:1385452... 184 7e-47
Medtr3g008250.3 | prohibitin complex protein | HC | chr3:1385452... 184 7e-47
Medtr5g093030.1 | SPFH domain/band 7 family protein | LC | chr5:... 82 4e-16
Medtr5g093040.1 | SPFH domain/band 7 family protein | HC | chr5:... 63 3e-10
>Medtr4g078200.1 | prohibitin complex protein | HC |
chr4:30108428-30104328 | 20130731
Length = 293
Score = 355 bits (912), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 185/273 (67%), Positives = 196/273 (71%), Gaps = 43/273 (15%)
Query: 17 AALLKVSIIGGLVVYGATNSLYNVEGGHRAIVFNRIIGVKDKVYPEGTHIMIPWFERPVI 76
+ALLKVSI+GGL VYGATN+LYNVEGGHRAIVFNRI+GVKDKVYPEGTHIMIPWFERPVI
Sbjct: 21 SALLKVSILGGLAVYGATNTLYNVEGGHRAIVFNRIVGVKDKVYPEGTHIMIPWFERPVI 80
Query: 77 YDVRARPHLVESTSGSRDLQMVKIGLRVLTRPLPDQLPTVYRTLGENYNERVLPSIIHET 136
YDVRARPHLVESTSGSRDLQMVKIGLRVLTRP+PDQLPTVYRTLGENYNERVLPSIIHET
Sbjct: 81 YDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPTVYRTLGENYNERVLPSIIHET 140
Query: 137 LKAVVAQYNASQLIT-------------------------------------------XX 153
LK+VVAQYNASQLIT
Sbjct: 141 LKSVVAQYNASQLITQREAVSREIRKILTERASQFNIALDDVSITSLTFGREFTAAIEAK 200
Query: 154 XXXXXXXXXXKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLRRIEAAREI 213
KFVVEKAEQDKRSA+IRAQGEA SAQLIGQAIANNPAFI LR+IEAAREI
Sbjct: 201 QVAAQEAERAKFVVEKAEQDKRSAIIRAQGEATSAQLIGQAIANNPAFIDLRKIEAAREI 260
Query: 214 AQTISNSANKVYXXXXXXXXXXXXXXXEPIGKR 246
A I+NSANKV+ E GK+
Sbjct: 261 AVLIANSANKVFLNSEDLLLNLQELTSESSGKK 293
>Medtr2g090760.1 | prohibitin complex protein | HC |
chr2:38917376-38913167 | 20130731
Length = 287
Score = 345 bits (885), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/252 (70%), Positives = 187/252 (74%), Gaps = 43/252 (17%)
Query: 17 AALLKVSIIGGLVVYGATNSLYNVEGGHRAIVFNRIIGVKDKVYPEGTHIMIPWFERPVI 76
+ L K+ IIGG+ +Y A NSLYNVEGGHRAIVFNR++GVKDKVYPEGTH +IPWFERPVI
Sbjct: 16 STLAKLGIIGGIGLYAAANSLYNVEGGHRAIVFNRLVGVKDKVYPEGTHFVIPWFERPVI 75
Query: 77 YDVRARPHLVESTSGSRDLQMVKIGLRVLTRPLPDQLPTVYRTLGENYNERVLPSIIHET 136
YDVRARPHLVESTSGSRDLQMVKIGLRVLTRPLP QLPTVYRTLGENYNERVLPSIIHET
Sbjct: 76 YDVRARPHLVESTSGSRDLQMVKIGLRVLTRPLPGQLPTVYRTLGENYNERVLPSIIHET 135
Query: 137 LKAVVAQYNASQLIT-------------------------------------------XX 153
LKAVVAQYNASQLIT
Sbjct: 136 LKAVVAQYNASQLITQREAVSREIRKILTERAANFNIALDDVSITSLTFGKEFTAAIEAK 195
Query: 154 XXXXXXXXXXKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLRRIEAAREI 213
KFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLR+IEAAREI
Sbjct: 196 QVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLRKIEAAREI 255
Query: 214 AQTISNSANKVY 225
A I+NSANKVY
Sbjct: 256 AHVIANSANKVY 267
>Medtr2g090760.2 | prohibitin complex protein | HC |
chr2:38917148-38913357 | 20130731
Length = 287
Score = 345 bits (885), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/252 (70%), Positives = 187/252 (74%), Gaps = 43/252 (17%)
Query: 17 AALLKVSIIGGLVVYGATNSLYNVEGGHRAIVFNRIIGVKDKVYPEGTHIMIPWFERPVI 76
+ L K+ IIGG+ +Y A NSLYNVEGGHRAIVFNR++GVKDKVYPEGTH +IPWFERPVI
Sbjct: 16 STLAKLGIIGGIGLYAAANSLYNVEGGHRAIVFNRLVGVKDKVYPEGTHFVIPWFERPVI 75
Query: 77 YDVRARPHLVESTSGSRDLQMVKIGLRVLTRPLPDQLPTVYRTLGENYNERVLPSIIHET 136
YDVRARPHLVESTSGSRDLQMVKIGLRVLTRPLP QLPTVYRTLGENYNERVLPSIIHET
Sbjct: 76 YDVRARPHLVESTSGSRDLQMVKIGLRVLTRPLPGQLPTVYRTLGENYNERVLPSIIHET 135
Query: 137 LKAVVAQYNASQLIT-------------------------------------------XX 153
LKAVVAQYNASQLIT
Sbjct: 136 LKAVVAQYNASQLITQREAVSREIRKILTERAANFNIALDDVSITSLTFGKEFTAAIEAK 195
Query: 154 XXXXXXXXXXKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLRRIEAAREI 213
KFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLR+IEAAREI
Sbjct: 196 QVAAQEAERAKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIANNPAFITLRKIEAAREI 255
Query: 214 AQTISNSANKVY 225
A I+NSANKVY
Sbjct: 256 AHVIANSANKVY 267
>Medtr4g078200.2 | prohibitin complex protein | HC |
chr4:30108067-30104049 | 20130731
Length = 232
Score = 280 bits (715), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 148/231 (64%), Positives = 155/231 (67%), Gaps = 43/231 (18%)
Query: 59 VYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPLPDQLPTVYR 118
VYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRP+PDQLPTVYR
Sbjct: 2 VYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLRVLTRPVPDQLPTVYR 61
Query: 119 TLGENYNERVLPSIIHETLKAVVAQYNASQLIT--------------------------- 151
TLGENYNERVLPSIIHETLK+VVAQYNASQLIT
Sbjct: 62 TLGENYNERVLPSIIHETLKSVVAQYNASQLITQREAVSREIRKILTERASQFNIALDDV 121
Query: 152 ----------------XXXXXXXXXXXXKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAI 195
KFVVEKAEQDKRSA+IRAQGEA SAQLIGQAI
Sbjct: 122 SITSLTFGREFTAAIEAKQVAAQEAERAKFVVEKAEQDKRSAIIRAQGEATSAQLIGQAI 181
Query: 196 ANNPAFITLRRIEAAREIAQTISNSANKVYXXXXXXXXXXXXXXXEPIGKR 246
ANNPAFI LR+IEAAREIA I+NSANKV+ E GK+
Sbjct: 182 ANNPAFIDLRKIEAAREIAVLIANSANKVFLNSEDLLLNLQELTSESSGKK 232
>Medtr8g046300.1 | prohibitin complex protein | HC |
chr8:18133041-18136859 | 20130731
Length = 281
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 135/234 (57%), Gaps = 44/234 (18%)
Query: 36 SLYNVEGGHRAIVFNRIIGVKDKVYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDL 95
SLY V+GG RA++F+R G+ D+ EGTH +IPW ++P I+D++ RPH S SG++DL
Sbjct: 31 SLYTVDGGQRAVLFDRFRGILDQSIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDL 90
Query: 96 QMVKIGLRVLTRPLPDQLPTVYRTLGENYNERVLPSIIHETLKAVVAQYNASQLIT---- 151
QMV + LRVL+RP + LPT+ + LG Y+E+VLPSI +E LKAVVAQ+NA QL+T
Sbjct: 91 QMVNLTLRVLSRPDTENLPTIVQNLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPQ 150
Query: 152 ---------------------------------------XXXXXXXXXXXXKFVVEKAEQ 172
KFVV KAEQ
Sbjct: 151 VSALVRESLVRRAKDFNIVLDDVAITHLSYGTEFSRAVEQKQVAQQEAERSKFVVMKAEQ 210
Query: 173 DKRSAVIRAQGEAKSAQLIGQAIAN-NPAFITLRRIEAAREIAQTISNSANKVY 225
++R+A+IRA+GE+++A+LI A A I LR IEAAREIA+T++ S N Y
Sbjct: 211 ERRAAIIRAEGESEAAKLISDATAAFGKGLIELRMIEAAREIARTLAKSPNVTY 264
>Medtr3g008250.2 | prohibitin complex protein | HC |
chr3:1385511-1380717 | 20130731
Length = 278
Score = 184 bits (467), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 140/251 (55%), Gaps = 44/251 (17%)
Query: 19 LLKVSIIGGLVVYGATNSLYNVEGGHRAIVFNRIIGVKDKVYPEGTHIMIPWFERPVIYD 78
L +V+ G +SLY V+GG RA++F+R G+ + EGTH +IPW ++P ++D
Sbjct: 13 LARVAFGLGAAATAVNSSLYTVDGGQRAVLFDRFRGILSESVGEGTHFLIPWVQKPYVFD 72
Query: 79 VRARPHLVESTSGSRDLQMVKIGLRVLTRPLPDQLPTVYRTLGENYNERVLPSIIHETLK 138
+R RPH S SG++DLQMV + LRVL+RP ++LPT+ + LG Y+E+VLPSI +E LK
Sbjct: 73 IRTRPHTFSSISGTKDLQMVNLTLRVLSRPDTERLPTIVQNLGLEYDEKVLPSIGNEVLK 132
Query: 139 AVVAQYNASQLIT-------------------------------------------XXXX 155
AVVAQ+NA QL+T
Sbjct: 133 AVVAQFNADQLLTDRPQVSALVRDSLVRRAKDFNILLDDVAITHLSYGGEFSRAVEQKQV 192
Query: 156 XXXXXXXXKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIA-NNPAFITLRRIEAAREIA 214
KFVV KAEQ++R+A+IRA+GE+ +A+LI A A I LRRIEA+REIA
Sbjct: 193 AQQEAERSKFVVMKAEQERRAAIIRAEGESDAAKLISDATAVAGMGLIELRRIEASREIA 252
Query: 215 QTISNSANKVY 225
T++ S N Y
Sbjct: 253 ATLAKSPNVSY 263
>Medtr3g008250.1 | prohibitin complex protein | HC |
chr3:1385452-1381094 | 20130731
Length = 278
Score = 184 bits (467), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 140/251 (55%), Gaps = 44/251 (17%)
Query: 19 LLKVSIIGGLVVYGATNSLYNVEGGHRAIVFNRIIGVKDKVYPEGTHIMIPWFERPVIYD 78
L +V+ G +SLY V+GG RA++F+R G+ + EGTH +IPW ++P ++D
Sbjct: 13 LARVAFGLGAAATAVNSSLYTVDGGQRAVLFDRFRGILSESVGEGTHFLIPWVQKPYVFD 72
Query: 79 VRARPHLVESTSGSRDLQMVKIGLRVLTRPLPDQLPTVYRTLGENYNERVLPSIIHETLK 138
+R RPH S SG++DLQMV + LRVL+RP ++LPT+ + LG Y+E+VLPSI +E LK
Sbjct: 73 IRTRPHTFSSISGTKDLQMVNLTLRVLSRPDTERLPTIVQNLGLEYDEKVLPSIGNEVLK 132
Query: 139 AVVAQYNASQLIT-------------------------------------------XXXX 155
AVVAQ+NA QL+T
Sbjct: 133 AVVAQFNADQLLTDRPQVSALVRDSLVRRAKDFNILLDDVAITHLSYGGEFSRAVEQKQV 192
Query: 156 XXXXXXXXKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIA-NNPAFITLRRIEAAREIA 214
KFVV KAEQ++R+A+IRA+GE+ +A+LI A A I LRRIEA+REIA
Sbjct: 193 AQQEAERSKFVVMKAEQERRAAIIRAEGESDAAKLISDATAVAGMGLIELRRIEASREIA 252
Query: 215 QTISNSANKVY 225
T++ S N Y
Sbjct: 253 ATLAKSPNVSY 263
>Medtr3g008250.3 | prohibitin complex protein | HC |
chr3:1385452-1381094 | 20130731
Length = 278
Score = 184 bits (467), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 140/251 (55%), Gaps = 44/251 (17%)
Query: 19 LLKVSIIGGLVVYGATNSLYNVEGGHRAIVFNRIIGVKDKVYPEGTHIMIPWFERPVIYD 78
L +V+ G +SLY V+GG RA++F+R G+ + EGTH +IPW ++P ++D
Sbjct: 13 LARVAFGLGAAATAVNSSLYTVDGGQRAVLFDRFRGILSESVGEGTHFLIPWVQKPYVFD 72
Query: 79 VRARPHLVESTSGSRDLQMVKIGLRVLTRPLPDQLPTVYRTLGENYNERVLPSIIHETLK 138
+R RPH S SG++DLQMV + LRVL+RP ++LPT+ + LG Y+E+VLPSI +E LK
Sbjct: 73 IRTRPHTFSSISGTKDLQMVNLTLRVLSRPDTERLPTIVQNLGLEYDEKVLPSIGNEVLK 132
Query: 139 AVVAQYNASQLIT-------------------------------------------XXXX 155
AVVAQ+NA QL+T
Sbjct: 133 AVVAQFNADQLLTDRPQVSALVRDSLVRRAKDFNILLDDVAITHLSYGGEFSRAVEQKQV 192
Query: 156 XXXXXXXXKFVVEKAEQDKRSAVIRAQGEAKSAQLIGQAIA-NNPAFITLRRIEAAREIA 214
KFVV KAEQ++R+A+IRA+GE+ +A+LI A A I LRRIEA+REIA
Sbjct: 193 AQQEAERSKFVVMKAEQERRAAIIRAEGESDAAKLISDATAVAGMGLIELRRIEASREIA 252
Query: 215 QTISNSANKVY 225
T++ S N Y
Sbjct: 253 ATLAKSPNVSY 263
>Medtr5g093030.1 | SPFH domain/band 7 family protein | LC |
chr5:40610694-40611846 | 20130731
Length = 192
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 73/122 (59%), Gaps = 2/122 (1%)
Query: 22 VSIIGGLVVYGATNSLYNVEGGHRAIVFNRIIGVKDKVYPEGTHIMIPWFERPVIYDVRA 81
VS G V G + S Y V+ G RA++ +R G + +G H IPW ++P I+D+R
Sbjct: 18 VSGFGAAVTIGHS-SFYIVKSGERAVLVDRFHGTLPRSVGKGIHFKIPWVQKPYIFDLRP 76
Query: 82 RPHLVESTSGSRDLQMVKIGLRVLTRPLPDQLPTVYRTLGENYNERVLPSIIHETLKAVV 141
R H + + S + D + V + LRV++RP +LPT+ + LG Y +++L I +E L+++V
Sbjct: 77 RTHRLSAISATDDHEPVNLTLRVISRPEVQRLPTIVQNLGLEY-DKILNFIANEVLESIV 135
Query: 142 AQ 143
A+
Sbjct: 136 AK 137
>Medtr5g093040.1 | SPFH domain/band 7 family protein | HC |
chr5:40614658-40614987 | 20130731
Length = 109
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 44 HRAIVFNRIIGVKDKVYPEGTHIMIPWFERPVIYDVRARPHLVESTSGSRDLQMVKIGLR 103
+ +++ ++ G + EGTH +IPW ++P I DVRAR H + + + D + V + LR
Sbjct: 29 YSSVLVDQFHGTLPESVGEGTHFLIPWVQKPYILDVRARTHTLSAIFATDDHEPVNLTLR 88
Query: 104 VLTRPLPDQLPTVYRTLG 121
V++RP LPT+ + LG
Sbjct: 89 VISRPDVQCLPTIVQNLG 106