Miyakogusa Predicted Gene

Lj0g3v0107629.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0107629.1 Non Characterized Hit- tr|G7LAI0|G7LAI0_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,60.44,6e-18,DLC,Dynein light chain, type 1/2; no
description,Dynein light chain, type 1/2; Dynein_light,Dynein
l,CUFF.6154.1
         (140 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g031880.1 | dynein light chain type 1 family protein | HC ...   184   2e-47
Medtr8g104900.1 | dynein light chain type 1 family protein | HC ...   177   3e-45
Medtr4g107350.1 | dynein light chain type 1 family protein | HC ...   107   4e-24
Medtr4g114060.2 | dynein light chain type 1 family protein | HC ...   104   2e-23
Medtr4g114060.1 | dynein light chain type 1 family protein | HC ...   104   2e-23
Medtr8g464690.1 | dynein light chain type 1 family protein | HC ...    66   1e-11
Medtr4g120150.1 | dynein light chain type 1 family protein | HC ...    66   1e-11
Medtr6g087770.1 | cytoplasmic dynein light chain | HC | chr6:330...    61   3e-10
Medtr2g101850.1 | cytoplasmic dynein light chain | HC | chr2:438...    61   4e-10

>Medtr1g031880.1 | dynein light chain type 1 family protein | HC |
           chr1:11198739-11201405 | 20130731
          Length = 146

 Score =  184 bits (468), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/143 (64%), Positives = 104/143 (72%), Gaps = 7/143 (4%)

Query: 5   AEKELDRRSKFLHSLIQNKKKTNTEQ-------HDDGDDSTSSSLNRSNVHVRACDMPLP 57
           AEKEL+RRSKFL+SLIQNKKK +TEQ         + D   +  LN +++HV+ACDM LP
Sbjct: 4   AEKELERRSKFLNSLIQNKKKKSTEQPEQKQEKEQEHDYKNNIKLNNNSIHVKACDMSLP 63

Query: 58  LQNHAFQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSYGPAWHCIVGTSFGSYVTHSVGG 117
           LQ HAFQ AR HLDSMP               EFDS YGPAWHCIVGTSFGSYVTHSVGG
Sbjct: 64  LQKHAFQFARDHLDSMPTKKPDSKHLALSLKKEFDSCYGPAWHCIVGTSFGSYVTHSVGG 123

Query: 118 FLYFSIDKVFILLFKTAVQPLNH 140
           F+YFSIDKV ILLF+TAV PL+H
Sbjct: 124 FVYFSIDKVHILLFRTAVAPLDH 146


>Medtr8g104900.1 | dynein light chain type 1 family protein | HC |
           chr8:44226350-44232514 | 20130731
          Length = 133

 Score =  177 bits (448), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 91/141 (64%), Positives = 101/141 (71%), Gaps = 10/141 (7%)

Query: 1   MERGAEKELDRRSKFLHSLIQNKKKT-NTEQHDDGDDSTSSSLNRSNVHVRACDMPLPLQ 59
           MER AE+EL++RSKFL SLI+NKK     EQH           N +NV +RACDMPL LQ
Sbjct: 1   MER-AEEELEKRSKFLKSLIKNKKTIEQQEQHQH--------FNNNNVKIRACDMPLTLQ 51

Query: 60  NHAFQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSYGPAWHCIVGTSFGSYVTHSVGGFL 119
           NHAF+CAR  LDSMP               EFDS+YGPAWHCIVGTSFGSYVTHSVGGFL
Sbjct: 52  NHAFRCARHLLDSMPPKKLHTKRLALTLKKEFDSTYGPAWHCIVGTSFGSYVTHSVGGFL 111

Query: 120 YFSIDKVFILLFKTAVQPLNH 140
           YFSIDKV ILLFKT V+PL+H
Sbjct: 112 YFSIDKVHILLFKTTVEPLDH 132


>Medtr4g107350.1 | dynein light chain type 1 family protein | HC |
           chr4:44373665-44370969 | 20130731
          Length = 307

 Score =  107 bits (266), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 52/87 (59%), Positives = 60/87 (68%), Gaps = 3/87 (3%)

Query: 51  ACDMPLPLQNHAFQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSYGPAWHCIVGTSFGSY 110
           + DMP  +Q HA  CAR+  DSM                EFD  YGPAWHCIVGTSFGS+
Sbjct: 220 SADMPPFMQIHAVDCARKAFDSM--EKFTSKTLALSLKKEFDGVYGPAWHCIVGTSFGSF 277

Query: 111 VTHSVGGFLYFSID-KVFILLFKTAVQ 136
           VTHSVGGFLYFS+D K++IL+FKTAVQ
Sbjct: 278 VTHSVGGFLYFSMDQKLYILIFKTAVQ 304


>Medtr4g114060.2 | dynein light chain type 1 family protein | HC |
           chr4:46940344-46937870 | 20130731
          Length = 245

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/101 (49%), Positives = 65/101 (64%), Gaps = 2/101 (1%)

Query: 36  DSTSSSLNRSNVHVRACDMPLPLQNHAFQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSY 95
           ++ SS + +  V V   DMP  +Q HAF+CAR+  DS+                EFD +Y
Sbjct: 143 ETLSSVIEKLQVKVLVSDMPSFMQVHAFRCARRTYDSLEEFSSKHIAHNIKK--EFDKAY 200

Query: 96  GPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVFILLFKTAVQ 136
           GPAWHCIVG SFGS+VTHS G FLYFS++ ++ILLFKT V+
Sbjct: 201 GPAWHCIVGPSFGSFVTHSTGCFLYFSMENLYILLFKTKVK 241


>Medtr4g114060.1 | dynein light chain type 1 family protein | HC |
           chr4:46940344-46937870 | 20130731
          Length = 245

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/101 (49%), Positives = 65/101 (64%), Gaps = 2/101 (1%)

Query: 36  DSTSSSLNRSNVHVRACDMPLPLQNHAFQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSY 95
           ++ SS + +  V V   DMP  +Q HAF+CAR+  DS+                EFD +Y
Sbjct: 143 ETLSSVIEKLQVKVLVSDMPSFMQVHAFRCARRTYDSLEEFSSKHIAHNIKK--EFDKAY 200

Query: 96  GPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVFILLFKTAVQ 136
           GPAWHCIVG SFGS+VTHS G FLYFS++ ++ILLFKT V+
Sbjct: 201 GPAWHCIVGPSFGSFVTHSTGCFLYFSMENLYILLFKTKVK 241


>Medtr8g464690.1 | dynein light chain type 1 family protein | HC |
           chr8:22911007-22910269 | 20130731
          Length = 109

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 33/48 (68%)

Query: 90  EFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVFILLFKTAVQP 137
           EFD  +GP W CIVGT FGS+VTH  G F+YF I  + ILLFK +  P
Sbjct: 47  EFDRVHGPGWQCIVGTDFGSFVTHCSGCFIYFCIGSMAILLFKGSAGP 94


>Medtr4g120150.1 | dynein light chain type 1 family protein | HC |
           chr4:49807388-49810451 | 20130731
          Length = 130

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 26/44 (59%), Positives = 33/44 (75%)

Query: 90  EFDSSYGPAWHCIVGTSFGSYVTHSVGGFLYFSIDKVFILLFKT 133
           EFD  +GP WHCIVG +FGSYVTH    F+YF +D+  +LLFK+
Sbjct: 86  EFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKS 129


>Medtr6g087770.1 | cytoplasmic dynein light chain | HC |
           chr6:33030451-33029408 | 20130731
          Length = 93

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 49  VRACDMPLPLQNHAFQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSYGPAWHCIVGTSFG 108
           V   DMPL +Q  A   A Q LD                  EFD +YG  W C+VG++FG
Sbjct: 8   VEETDMPLKMQIQAMSYASQALD--LYDVCDCRSIAGYIKKEFDKNYGSRWQCVVGSNFG 65

Query: 109 SYVTHSVGGFLYFSIDKVFILLFKTA 134
            + +H+ G F+YFS++ +  L++K A
Sbjct: 66  CFFSHTPGTFIYFSLETLKFLIYKGA 91


>Medtr2g101850.1 | cytoplasmic dynein light chain | HC |
           chr2:43819163-43818213 | 20130731
          Length = 91

 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 53  DMPLPLQNHAFQCARQHLDSMPXXXXXXXXXXXXXXXEFDSSYGPAWHCIVGTSFGSYVT 112
           DMP  +Q  A   A + LD                  EFD+ YG  W C+VG+SFG + T
Sbjct: 12  DMPTKMQIQAMAYASEALD--LYDVIDCKSIAAHIKKEFDARYGGGWQCVVGSSFGCFFT 69

Query: 113 HSVGGFLYFSIDKVFILLFK 132
           HS G F+YF+++ +  L+FK
Sbjct: 70  HSKGTFIYFTLETLNFLIFK 89