Miyakogusa Predicted Gene

Lj0g3v0106859.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0106859.1 Non Characterized Hit- tr|I1N0I4|I1N0I4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.68,2e-18,VACUOLAR
ATP SYNTHASE SUBUNIT H,ATPase, V0 complex, subunit E;
ATP_synt_H,ATPase, V0 complex, subuni,CUFF.6100.1
         (70 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g094130.1 | ATPase, V0 complex, subunit E | HC | chr5:4111...   122   9e-29

>Medtr5g094130.1 | ATPase, V0 complex, subunit E | HC |
          chr5:41112260-41115481 | 20130731
          Length = 70

 Score =  122 bits (305), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 58/70 (82%), Positives = 65/70 (92%)

Query: 1  MGFLVTTLIFAVIGIIACLCTRICCNRGPSTNLFHLTLVITATICCWMMWAIVYLAQMKP 60
          MGF+VT+LIF +IGIIACL TRIC N+GPS NLFHLTLV+T+TICCWMMWAIVYLAQM P
Sbjct: 1  MGFVVTSLIFLLIGIIACLSTRICFNKGPSANLFHLTLVLTSTICCWMMWAIVYLAQMNP 60

Query: 61 LIVPILSEGE 70
          LIVPILS+GE
Sbjct: 61 LIVPILSDGE 70