Miyakogusa Predicted Gene

Lj0g3v0106569.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0106569.1 Non Characterized Hit- tr|D8U2G2|D8U2G2_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,45.83,4e-19,Prefoldin_2,Prefoldin beta-like; coiled-coil,NULL;
seg,NULL; Prefoldin,Prefoldin; SUBFAMILY NOT NAME,CUFF.6099.1
         (127 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g080770.1 | prefoldin | HC | chr1:35927427-35924534 | 2013...   202   6e-53

>Medtr1g080770.1 | prefoldin | HC | chr1:35927427-35924534 |
           20130731
          Length = 126

 Score =  202 bits (514), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 99/125 (79%), Positives = 108/125 (86%)

Query: 3   HQGGGSETEVTWEDQQNINKFGRLNNRLHELDDEIKVAKETNENFEDASNELILTDEDVV 62
            QGGGSETEVTWEDQQNINKFGRLNNRLHEL DEIK+AKE+N+N EDASNELILTDE+VV
Sbjct: 2   QQGGGSETEVTWEDQQNINKFGRLNNRLHELHDEIKIAKESNDNLEDASNELILTDEEVV 61

Query: 63  RFQIGEVFAHVPKDEVESRIEQMQEVTSXXXXXXXXXXXSVLAQMAELKKVLYAKFNDSI 122
           RFQIGEVFAHVPKDEVESRIEQMQE TS           SV+AQM+ELKK+LY KF +SI
Sbjct: 62  RFQIGEVFAHVPKDEVESRIEQMQEATSQKLEKLEEEKQSVVAQMSELKKILYGKFGESI 121

Query: 123 NLEEE 127
           NLEE+
Sbjct: 122 NLEED 126