Miyakogusa Predicted Gene
- Lj0g3v0106359.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0106359.1 Non Characterized Hit- tr|J3LTZ8|J3LTZ8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G4,49.44,3e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Raffinose_syn,Raffinose
synthase,NODE_32364_length_1246_cov_522.880432.path2.1
(89 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g091880.1 | galactinol-raffinose galactosyltransferase | H... 132 5e-32
Medtr1g052515.1 | galactinol-raffinose galactosyltransferase | H... 108 9e-25
Medtr5g096820.1 | galactinol-raffinose galactosyltransferase | H... 59 7e-10
Medtr3g075510.1 | raffinose synthase or seed inhibition protein ... 56 6e-09
Medtr4g115330.3 | raffinose synthase or seed inhibition protein ... 54 2e-08
Medtr4g115330.2 | raffinose synthase or seed inhibition protein ... 54 2e-08
Medtr4g115330.4 | raffinose synthase or seed inhibition protein ... 54 2e-08
Medtr4g115330.5 | raffinose synthase or seed inhibition protein ... 54 2e-08
Medtr4g115330.1 | raffinose synthase or seed inhibition protein ... 54 3e-08
>Medtr7g091880.1 | galactinol-raffinose galactosyltransferase | HC |
chr7:36372945-36367215 | 20130731
Length = 770
Score = 132 bits (333), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 82/100 (82%), Gaps = 11/100 (11%)
Query: 1 MFNTGGAVEQVEI----NKPELFDGEVSSN-------TATIALKVRGNGRFGVYSSQSPL 49
MFNTGGA+E+VEI +K ELFDGEV+++ TATIALKVRG+G+FGVYSSQ PL
Sbjct: 671 MFNTGGAIEEVEIYRTSDKQELFDGEVTTSLSSNRTTTATIALKVRGSGKFGVYSSQRPL 730
Query: 50 KCAVDGSETDFFYDSETGLTTFLIPVPSEELYRWSIEIQV 89
K AVDG++TDF Y+SE GLTTF IP+P E++Y+WSIEIQV
Sbjct: 731 KFAVDGTKTDFNYNSENGLTTFSIPIPQEDMYKWSIEIQV 770
>Medtr1g052515.1 | galactinol-raffinose galactosyltransferase | HC |
chr1:21378819-21372033 | 20130731
Length = 740
Score = 108 bits (271), Expect = 9e-25, Method: Composition-based stats.
Identities = 52/88 (59%), Positives = 64/88 (72%), Gaps = 9/88 (10%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSETDF 60
MFNTGGAVE EI+K TA+ +L+VRG+GRFGVYSSQ P+KC V +ETDF
Sbjct: 661 MFNTGGAVEHFEIHK---------GATASASLRVRGSGRFGVYSSQKPVKCVVGDNETDF 711
Query: 61 FYDSETGLTTFLIPVPSEELYRWSIEIQ 88
Y+SETGL TF +PV E++Y+W IEIQ
Sbjct: 712 NYESETGLLTFYMPVSVEDMYKWPIEIQ 739
>Medtr5g096820.1 | galactinol-raffinose galactosyltransferase | HC |
chr5:42347956-42353040 | 20130731
Length = 760
Score = 59.3 bits (142), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSETDF 60
MFN+GGAV++ F+G A +++KVRG G FG YSS P VD E +F
Sbjct: 681 MFNSGGAVKEFSSG----FNG-----VANVSMKVRGCGLFGAYSSAQPKLITVDSEEVEF 731
Query: 61 FYDSETGLTTFLIPVPSEELYRWSIEIQV 89
Y+ E+GL T + VP +ELY+W+I I +
Sbjct: 732 SYEEESGLVTIDLSVPEKELYQWNISIDL 760
>Medtr3g075510.1 | raffinose synthase or seed inhibition protein |
HC | chr3:34386505-34382026 | 20130731
Length = 751
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSETDF 60
M+N+GGAVE++ + ++N + +K RG GRFG YS+ P +C VD E +F
Sbjct: 673 MYNSGGAVEELSCIRD-------AANCTIVNIKGRGCGRFGAYSNVRPKRCLVDMKEEEF 725
Query: 61 FYDSETGLT 69
Y+SE GL
Sbjct: 726 SYNSEDGLV 734
>Medtr4g115330.3 | raffinose synthase or seed inhibition protein |
HC | chr4:47617371-47613234 | 20130731
Length = 670
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 13/79 (16%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSETDF 60
MFN GGAVE G V + A + L+++G G+FG Y S P +C ++ S DF
Sbjct: 593 MFNAGGAVE-----------GLVYKDDA-VRLEIKGCGKFGAYCSARPTRCLLEDSVVDF 640
Query: 61 FYDSETGLTTFLIP-VPSE 78
YD+++GL +F I +P E
Sbjct: 641 EYDNDSGLLSFAIDYLPQE 659
>Medtr4g115330.2 | raffinose synthase or seed inhibition protein |
HC | chr4:47617371-47613234 | 20130731
Length = 670
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 13/79 (16%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSETDF 60
MFN GGAVE G V + A + L+++G G+FG Y S P +C ++ S DF
Sbjct: 593 MFNAGGAVE-----------GLVYKDDA-VRLEIKGCGKFGAYCSARPTRCLLEDSVVDF 640
Query: 61 FYDSETGLTTFLIP-VPSE 78
YD+++GL +F I +P E
Sbjct: 641 EYDNDSGLLSFAIDYLPQE 659
>Medtr4g115330.4 | raffinose synthase or seed inhibition protein |
HC | chr4:47617371-47613300 | 20130731
Length = 670
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 13/79 (16%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSETDF 60
MFN GGAVE G V + A + L+++G G+FG Y S P +C ++ S DF
Sbjct: 593 MFNAGGAVE-----------GLVYKDDA-VRLEIKGCGKFGAYCSARPTRCLLEDSVVDF 640
Query: 61 FYDSETGLTTFLIP-VPSE 78
YD+++GL +F I +P E
Sbjct: 641 EYDNDSGLLSFAIDYLPQE 659
>Medtr4g115330.5 | raffinose synthase or seed inhibition protein |
HC | chr4:47617371-47613234 | 20130731
Length = 670
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 13/79 (16%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSETDF 60
MFN GGAVE G V + A + L+++G G+FG Y S P +C ++ S DF
Sbjct: 593 MFNAGGAVE-----------GLVYKDDA-VRLEIKGCGKFGAYCSARPTRCLLEDSVVDF 640
Query: 61 FYDSETGLTTFLIP-VPSE 78
YD+++GL +F I +P E
Sbjct: 641 EYDNDSGLLSFAIDYLPQE 659
>Medtr4g115330.1 | raffinose synthase or seed inhibition protein |
HC | chr4:47617311-47614489 | 20130731
Length = 795
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 1 MFNTGGAVEQVEINKPELFDGEVSSNTATIALKVRGNGRFGVYSSQSPLKCAVDGSETDF 60
MFN GGAVE G V + A + L+++G G+FG Y S P +C ++ S DF
Sbjct: 718 MFNAGGAVE-----------GLVYKDDA-VRLEIKGCGKFGAYCSARPTRCLLEDSVVDF 765
Query: 61 FYDSETGLTTFLIPVPSEE 79
YD+++GL +F I +E
Sbjct: 766 EYDNDSGLLSFAIDYLPQE 784