Miyakogusa Predicted Gene
- Lj0g3v0105629.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0105629.1 Non Characterized Hit- tr|I1K5W7|I1K5W7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,71.7,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain; FAMIL,CUFF.6023.1
(296 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g488100.1 | BHLH transcription factor-like protein | HC | ... 313 2e-85
Medtr6g488100.2 | BHLH transcription factor-like protein | HC | ... 307 8e-84
Medtr6g488100.4 | BHLH transcription factor-like protein | HC | ... 293 1e-79
Medtr8g103065.1 | BHLH transcription factor-like protein | HC | ... 286 2e-77
Medtr6g488100.3 | BHLH transcription factor-like protein | HC | ... 271 7e-73
Medtr8g103065.2 | BHLH transcription factor-like protein | HC | ... 249 2e-66
Medtr2g101520.1 | BHLH transcription factor-like protein | HC | ... 191 5e-49
Medtr2g011070.1 | BHLH transcription factor-like protein | HC | ... 105 4e-23
Medtr2g081820.2 | BHLH transcription factor-like protein | HC | ... 101 8e-22
Medtr2g081820.1 | BHLH transcription factor-like protein | HC | ... 101 9e-22
Medtr8g466800.1 | BHLH transcription factor-like protein | HC | ... 101 9e-22
Medtr8g466800.2 | BHLH transcription factor-like protein | HC | ... 100 2e-21
Medtr3g112170.1 | BHLH transcription factor-like protein | HC | ... 100 2e-21
Medtr1g094085.1 | BHLH transcription factor-like protein | HC | ... 90 3e-18
Medtr1g107185.1 | BHLH transcription factor-like protein | HC | ... 85 1e-16
Medtr4g087300.1 | BHLH transcription factor-like protein | HC | ... 77 2e-14
Medtr4g087300.2 | BHLH transcription factor-like protein | HC | ... 77 3e-14
Medtr4g087300.3 | BHLH transcription factor-like protein | HC | ... 72 8e-13
Medtr4g131160.1 | BHLH transcription factor | HC | chr4:54719229... 56 5e-08
Medtr4g131160.2 | BHLH transcription factor | HC | chr4:54719229... 56 5e-08
Medtr1g080890.1 | transcription factor UNE12-like protein | HC |... 53 4e-07
Medtr1g018090.1 | helix loop helix DNA-binding domain protein | ... 50 2e-06
>Medtr6g488100.1 | BHLH transcription factor-like protein | HC |
chr6:33181264-33175604 | 20130731
Length = 323
Score = 313 bits (801), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/303 (58%), Positives = 199/303 (65%), Gaps = 26/303 (8%)
Query: 1 MNRSVLQSSPVQQMMAGNPNNLWNFNTMHXXXXXXXXXXXXXXXXXXLTXXXXXXXXXXX 60
MNR V+QSSPVQQMMA NP N WN N M
Sbjct: 1 MNRGVVQSSPVQQMMASNP-NWWNINNMRPPSPQPPPLFSSPSNFLN-PNYAPTSSFLPF 58
Query: 61 XXWHDN-QELPESWSQLLMSGLMSEEDKAGM----CQMLISQASNTSLVDVKQESSANSY 115
WH+N QELPE WSQ LM G++ EEDK GM QMLISQA N SLVDVKQE+S NSY
Sbjct: 59 SSWHENHQELPEPWSQQLMGGIVGEEDKIGMNQFQNQMLISQAPNASLVDVKQENSGNSY 118
Query: 116 VFGHGNEEFQAANPTWXXXXXXXXXXXXXXXXXXXXXVLDFSNNKT--DARPLASDPSSE 173
+GHGNEE + ++ +LDF+NN + D R D SSE
Sbjct: 119 AYGHGNEELNSCVTSF----------------NNNNNMLDFTNNNSNIDVRHPPLDRSSE 162
Query: 174 CNSTGAGGAFKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGY 233
CNST +GGA KKARVQ STTQ+TFKVRKEKLGDRITALHQ+VSPFGKTDTASVLLEAIGY
Sbjct: 163 CNSTASGGAMKKARVQQSTTQATFKVRKEKLGDRITALHQIVSPFGKTDTASVLLEAIGY 222
Query: 234 IRFLQSQIEALSLPYLGSGSGNMRHQQSVQGDQRNCIFPEDPGQLLNENCLKRKAAGDQD 293
IRFLQSQIEALSLPYL +GSGN R QS+QG+ NC+FPEDPGQLLNEN LKRKAA +
Sbjct: 223 IRFLQSQIEALSLPYLSNGSGNTRQPQSIQGE-NNCLFPEDPGQLLNENGLKRKAAEEVS 281
Query: 294 SQE 296
+E
Sbjct: 282 QEE 284
>Medtr6g488100.2 | BHLH transcription factor-like protein | HC |
chr6:33181262-33175616 | 20130731
Length = 328
Score = 307 bits (786), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 177/307 (57%), Positives = 199/307 (64%), Gaps = 29/307 (9%)
Query: 1 MNRSVLQSSPVQQMMAGNPNNLWNFNTMHXXXXXXXXXXXXXXXXXXLTXXXXXXXXXXX 60
MNR V+QSSPVQQMMA NP N WN N M
Sbjct: 1 MNRGVVQSSPVQQMMASNP-NWWNINNMRPPSPQPPPLFSSPSNFLN-PNYAPTSSFLPF 58
Query: 61 XXWHDN-QELPESWSQLLMSGLMSEEDKAGM----CQMLISQASNTSLVDVKQESSANSY 115
WH+N QELPE WSQ LM G++ EEDK GM QMLISQA N SLVDVKQE+S NSY
Sbjct: 59 SSWHENHQELPEPWSQQLMGGIVGEEDKIGMNQFQNQMLISQAPNASLVDVKQENSGNSY 118
Query: 116 VFGHGNEEFQAANPTWXXXXXXXXXXXXXXXXXXXXXVLDFSNNKT--DARPLASDPSSE 173
+GHGNEE + ++ +LDF+NN + D R D SSE
Sbjct: 119 AYGHGNEELNSCVTSF----------------NNNNNMLDFTNNNSNIDVRHPPLDRSSE 162
Query: 174 CNSTGAGGAFKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGY 233
CNST +GGA KKARVQ STTQ+TFKVRKEKLGDRITALHQ+VSPFGKTDTASVLLEAIGY
Sbjct: 163 CNSTASGGAMKKARVQQSTTQATFKVRKEKLGDRITALHQIVSPFGKTDTASVLLEAIGY 222
Query: 234 IRFLQSQIEALSLPYLGSGSGNMRHQQSVQGD----QRNCIFPEDPGQLLNENCLKRKAA 289
IRFLQSQIEALSLPYL +GSGN R QSV+ + + NC+FPEDPGQLLNEN LKRKAA
Sbjct: 223 IRFLQSQIEALSLPYLSNGSGNTRQPQSVRINMIQGENNCLFPEDPGQLLNENGLKRKAA 282
Query: 290 GDQDSQE 296
+ +E
Sbjct: 283 EEVSQEE 289
>Medtr6g488100.4 | BHLH transcription factor-like protein | HC |
chr6:33181264-33176511 | 20130731
Length = 273
Score = 293 bits (750), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 166/285 (58%), Positives = 184/285 (64%), Gaps = 26/285 (9%)
Query: 1 MNRSVLQSSPVQQMMAGNPNNLWNFNTMHXXXXXXXXXXXXXXXXXXLTXXXXXXXXXXX 60
MNR V+QSSPVQQMMA NP N WN N M
Sbjct: 1 MNRGVVQSSPVQQMMASNP-NWWNINNMRPPSPQPPPLFSSPSNFLN-PNYAPTSSFLPF 58
Query: 61 XXWHDN-QELPESWSQLLMSGLMSEEDKAGM----CQMLISQASNTSLVDVKQESSANSY 115
WH+N QELPE WSQ LM G++ EEDK GM QMLISQA N SLVDVKQE+S NSY
Sbjct: 59 SSWHENHQELPEPWSQQLMGGIVGEEDKIGMNQFQNQMLISQAPNASLVDVKQENSGNSY 118
Query: 116 VFGHGNEEFQAANPTWXXXXXXXXXXXXXXXXXXXXXVLDFSNNKT--DARPLASDPSSE 173
+GHGNEE + +LDF+NN + D R D SSE
Sbjct: 119 AYGHGNEELNSC----------------VTSFNNNNNMLDFTNNNSNIDVRHPPLDRSSE 162
Query: 174 CNSTGAGGAFKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGY 233
CNST +GGA KKARVQ STTQ+TFKVRKEKLGDRITALHQ+VSPFGKTDTASVLLEAIGY
Sbjct: 163 CNSTASGGAMKKARVQQSTTQATFKVRKEKLGDRITALHQIVSPFGKTDTASVLLEAIGY 222
Query: 234 IRFLQSQIEALSLPYLGSGSGNMRHQQSVQGDQRNCIFPEDPGQL 278
IRFLQSQIEALSLPYL +GSGN R QS+QG+ NC+FPEDPGQ+
Sbjct: 223 IRFLQSQIEALSLPYLSNGSGNTRQPQSIQGE-NNCLFPEDPGQV 266
>Medtr8g103065.1 | BHLH transcription factor-like protein | HC |
chr8:43423713-43427692 | 20130731
Length = 336
Score = 286 bits (731), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 175/305 (57%), Positives = 194/305 (63%), Gaps = 18/305 (5%)
Query: 1 MNRSV-LQSSPVQQMMAGNPNNLWNFNTMHXXXXXXXXXXXXXXXXXXLTXXXXXXXXXX 59
MNR V LQSSPVQQMMAGNPNN WN
Sbjct: 1 MNRGVYLQSSPVQQMMAGNPNNWWNTMRPPAPDHHQPNFFSTTTPNSNFQTPYPHASSLP 60
Query: 60 XXXWHDNQE-LPESWSQLLMSGLMSEEDKAGMCQMLISQASNTSLVD-VKQESSANSYVF 117
WH+NQ+ LPESWS LLM+G++ EE+KA M L SN SLVD VKQESS N+YV+
Sbjct: 61 LPSWHENQDQLPESWSHLLMNGVVYEEEKASM---LSQPPSNASLVDHVKQESSVNNYVY 117
Query: 118 GHGNEEFQAA-NPTWXXXXXXXXXXXXXXXXX--XXXXVLDFSNNKTDARPLASDPSSE- 173
G NEEF N TW +LDFSN KTD R SD SS+
Sbjct: 118 G--NEEFHGTPNSTWSQIVSVPSSSSSKSCATSFTSTSMLDFSNTKTDIRSPPSDLSSDQ 175
Query: 174 CNSTGAGGAFKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGY 233
CNS+ AGGA KKARVQ STFKVRKEKLGDRITALHQLVSPFGKTDTASVLLE+IGY
Sbjct: 176 CNSSSAGGALKKARVQ----SSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLESIGY 231
Query: 234 IRFLQSQIEALSLPYLGSGSGNMRHQQSVQGD--QRNCIFPEDPGQLLNENCLKRKAAGD 291
IRFLQSQIEALSLPYLG+GSGNM+ QQ ++NC+FPEDPGQLLNENCLKRKA +
Sbjct: 232 IRFLQSQIEALSLPYLGNGSGNMKKQQQQYVVQGEKNCLFPEDPGQLLNENCLKRKAVRE 291
Query: 292 QDSQE 296
Q +E
Sbjct: 292 QVCEE 296
>Medtr6g488100.3 | BHLH transcription factor-like protein | HC |
chr6:33181262-33175683 | 20130731
Length = 269
Score = 271 bits (692), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 157/275 (57%), Positives = 175/275 (63%), Gaps = 25/275 (9%)
Query: 1 MNRSVLQSSPVQQMMAGNPNNLWNFNTMHXXXXXXXXXXXXXXXXXXLTXXXXXXXXXXX 60
MNR V+QSSPVQQMMA NP N WN N M
Sbjct: 1 MNRGVVQSSPVQQMMASNP-NWWNINNMRPPSPQPPPLFSSPSNFLN-PNYAPTSSFLPF 58
Query: 61 XXWHDN-QELPESWSQLLMSGLMSEEDKAGM----CQMLISQASNTSLVDVKQESSANSY 115
WH+N QELPE WSQ LM G++ EEDK GM QMLISQA N SLVDVKQE+S NSY
Sbjct: 59 SSWHENHQELPEPWSQQLMGGIVGEEDKIGMNQFQNQMLISQAPNASLVDVKQENSGNSY 118
Query: 116 VFGHGNEEFQAANPTWXXXXXXXXXXXXXXXXXXXXXVLDFSNNKT--DARPLASDPSSE 173
+GHGNEE + ++ +LDF+NN + D R D SSE
Sbjct: 119 AYGHGNEELNSCVTSF----------------NNNNNMLDFTNNNSNIDVRHPPLDRSSE 162
Query: 174 CNSTGAGGAFKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGY 233
CNST +GGA KKARVQ STTQ+TFKVRKEKLGDRITALHQ+VSPFGKTDTASVLLEAIGY
Sbjct: 163 CNSTASGGAMKKARVQQSTTQATFKVRKEKLGDRITALHQIVSPFGKTDTASVLLEAIGY 222
Query: 234 IRFLQSQIEALSLPYLGSGSGNMRHQQSVQGDQRN 268
IRFLQSQIEALSLPYL +GSGN R QSV+ + N
Sbjct: 223 IRFLQSQIEALSLPYLSNGSGNTRQPQSVRINMVN 257
>Medtr8g103065.2 | BHLH transcription factor-like protein | HC |
chr8:43423713-43427692 | 20130731
Length = 271
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/267 (57%), Positives = 167/267 (62%), Gaps = 16/267 (5%)
Query: 1 MNRSV-LQSSPVQQMMAGNPNNLWNFNTMHXXXXXXXXXXXXXXXXXXLTXXXXXXXXXX 59
MNR V LQSSPVQQMMAGNPNN WN
Sbjct: 1 MNRGVYLQSSPVQQMMAGNPNNWWNTMRPPAPDHHQPNFFSTTTPNSNFQTPYPHASSLP 60
Query: 60 XXXWHDNQE-LPESWSQLLMSGLMSEEDKAGMCQMLISQASNTSLVD-VKQESSANSYVF 117
WH+NQ+ LPESWS LLM+G++ EE+KA M L SN SLVD VKQESS N+YV+
Sbjct: 61 LPSWHENQDQLPESWSHLLMNGVVYEEEKASM---LSQPPSNASLVDHVKQESSVNNYVY 117
Query: 118 GHGNEEFQAA-NPTWXXXXXXXXXXXXXXXXX--XXXXVLDFSNNKTDARPLASDPSSE- 173
G NEEF N TW +LDFSN KTD R SD SS+
Sbjct: 118 G--NEEFHGTPNSTWSQIVSVPSSSSSKSCATSFTSTSMLDFSNTKTDIRSPPSDLSSDQ 175
Query: 174 CNSTGAGGAFKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGY 233
CNS+ AGGA KKARVQ STFKVRKEKLGDRITALHQLVSPFGKTDTASVLLE+IGY
Sbjct: 176 CNSSSAGGALKKARVQ----SSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLESIGY 231
Query: 234 IRFLQSQIEALSLPYLGSGSGNMRHQQ 260
IRFLQSQIEALSLPYLG+GSGNM+ QQ
Sbjct: 232 IRFLQSQIEALSLPYLGNGSGNMKKQQ 258
>Medtr2g101520.1 | BHLH transcription factor-like protein | HC |
chr2:43662081-43665530 | 20130731
Length = 329
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/242 (48%), Positives = 146/242 (60%), Gaps = 25/242 (10%)
Query: 70 PESWSQLLMSGLMSEEDKAGMCQM-----------LISQASNTSLVDV-KQESSANSYVF 117
P+SWSQLL +GL EE++ G +++ +S +D+ K E S +
Sbjct: 43 PQSWSQLLFTGLPGEEERLGFNHFQPKNSENWDVQIMNPSSRVPFMDIIKHEVSQGENFY 102
Query: 118 G---HGNEEFQAAN----PTWXXXXXXXXXXXXXXXXXXXXXVLDFSNNKTD-ARPLASD 169
G H +EEF A + +W +LDF+ NK D ++ D
Sbjct: 103 GQQGHHHEEFHANSGSLGSSWSHMVPVSSPSSHITSLSSDN-ILDFTYNKVDHSKNQLPD 161
Query: 170 PSSECNSTGAGGAFKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLE 229
SECNS+ G KKARVQPS++Q KVRKEKLGDRITALHQLVSPFGKTDTASVLLE
Sbjct: 162 QISECNSSTTG-VNKKARVQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLE 220
Query: 230 AIGYIRFLQSQIEALSLPYLGSGSGN--MRHQQSVQGDQRNCIFPEDPGQLLNENCLKRK 287
AIGYIRFLQSQIEALS PYL + + MR+Q SV +RN +FPEDPGQLL++ LKRK
Sbjct: 221 AIGYIRFLQSQIEALSTPYLDTAASKNMMRNQHSVH-VERNSVFPEDPGQLLDDTGLKRK 279
Query: 288 AA 289
A
Sbjct: 280 GA 281
>Medtr2g011070.1 | BHLH transcription factor-like protein | HC |
chr2:2634659-2637836 | 20130731
Length = 416
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Query: 182 AFKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQI 241
A K+ R++ + TFKVRKEKLGDRITAL QLVSPFGKTDTASVL EAI YI+FL Q+
Sbjct: 288 AVKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQV 347
Query: 242 EALSLPYLGSGSGNMRHQQ 260
LS PY+ SGS ++HQQ
Sbjct: 348 NVLSTPYMKSGSP-IQHQQ 365
>Medtr2g081820.2 | BHLH transcription factor-like protein | HC |
chr2:34351822-34347002 | 20130731
Length = 436
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
Query: 177 TGAGGAFKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRF 236
+G+ A K+ R + +T FKVRKEK+GDRITAL QLVSPFGKTDTASVL EAI YI+F
Sbjct: 305 SGSEPAPKRTRNETPSTLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKF 364
Query: 237 LQSQIEALSLPYLGSGSGNMRHQQSVQGDQRNC 269
L Q+ LS PY+ SG+ + Q S G + C
Sbjct: 365 LHEQVTVLSTPYMKSGAPSEIQQNS--GKLKKC 395
>Medtr2g081820.1 | BHLH transcription factor-like protein | HC |
chr2:34351742-34347224 | 20130731
Length = 437
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
Query: 177 TGAGGAFKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRF 236
+G+ A K+ R + +T FKVRKEK+GDRITAL QLVSPFGKTDTASVL EAI YI+F
Sbjct: 306 SGSEPAPKRTRNETPSTLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKF 365
Query: 237 LQSQIEALSLPYLGSGSGNMRHQQSVQGDQRNC 269
L Q+ LS PY+ SG+ + Q S G + C
Sbjct: 366 LHEQVTVLSTPYMKSGAPSEIQQNS--GKLKKC 396
>Medtr8g466800.1 | BHLH transcription factor-like protein | HC |
chr8:23875959-23871927 | 20130731
Length = 444
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Query: 169 DPSSECNSTGAGGAFKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLL 228
D S+ +G+ A K+++ + + FKVRKEK+GDRITAL QLVSPFGKTDTASVL
Sbjct: 305 DSSAMVKKSGSEPAPKRSKNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLS 364
Query: 229 EAIGYIRFLQSQIEALSLPYLGSGSGNMRHQQS 261
EAI YI+FL Q+ LS PY+ SG+ ++HQQS
Sbjct: 365 EAIEYIKFLHEQVTVLSTPYMKSGAP-IQHQQS 396
>Medtr8g466800.2 | BHLH transcription factor-like protein | HC |
chr8:23875959-23873129 | 20130731
Length = 402
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 169 DPSSECNSTGAGGAFKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLL 228
D S+ +G+ A K+++ + + FKVRKEK+GDRITAL QLVSPFGKTDTASVL
Sbjct: 305 DSSAMVKKSGSEPAPKRSKNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLS 364
Query: 229 EAIGYIRFLQSQIEALSLPYLGSGSGNMRHQQ 260
EAI YI+FL Q+ LS PY+ SG+ ++HQQ
Sbjct: 365 EAIEYIKFLHEQVTVLSTPYMKSGAP-IQHQQ 395
>Medtr3g112170.1 | BHLH transcription factor-like protein | HC |
chr3:52513323-52508362 | 20130731
Length = 454
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 50/55 (90%)
Query: 197 FKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGS 251
FKVRKEKLGDRI AL QLV+PFGKTDTASVL+EAIGYI+FLQ Q+E LS+PY+ S
Sbjct: 339 FKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQGQVETLSVPYMKS 393
>Medtr1g094085.1 | BHLH transcription factor-like protein | HC |
chr1:42270306-42274574 | 20130731
Length = 533
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Query: 181 GAFKKARVQPSTTQSTFKVR--KEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQ 238
+ KK + STT S+ KV+ K KLGD+ITAL Q+VSPFGKTDTASVL EAIGYI++L+
Sbjct: 402 ASLKKPKQDTSTTNSSSKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKYLE 461
Query: 239 SQIEALSLPYLGSGS 253
Q++ LS PYL + S
Sbjct: 462 EQVQLLSNPYLKANS 476
>Medtr1g107185.1 | BHLH transcription factor-like protein | HC |
chr1:48511559-48513366 | 20130731
Length = 282
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 178 GAGG--AFKKARVQPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIR 235
G GG KK + T+ K +KEKLG+RI AL QLVSPFGKTDTASVL EA GYIR
Sbjct: 130 GVGGQKGPKKTKGDNPTSTGHAKPKKEKLGERIAALQQLVSPFGKTDTASVLHEATGYIR 189
Query: 236 FLQSQIEALSLPYL 249
FL Q++ L PYL
Sbjct: 190 FLHDQVQVLCSPYL 203
>Medtr4g087300.1 | BHLH transcription factor-like protein | HC |
chr4:34241789-34246686 | 20130731
Length = 165
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 189 QPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPY 248
+P + ST K RKEK+G+RI AL QLVSP+GKTDT+SVL EA+ YI FL Q++ LS PY
Sbjct: 48 KPDLSIST-KDRKEKIGERIVALQQLVSPYGKTDTSSVLKEAMDYIGFLHKQVKLLSAPY 106
Query: 249 LGSGSGN-MRHQQSVQGDQRN-CIFP 272
L + ++ +S R CI P
Sbjct: 107 LETAPATQLQDTESCSLRSRGLCIVP 132
>Medtr4g087300.2 | BHLH transcription factor-like protein | HC |
chr4:34242607-34246655 | 20130731
Length = 142
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 189 QPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPY 248
+P + ST K RKEK+G+RI AL QLVSP+GKTDT+SVL EA+ YI FL Q++ LS PY
Sbjct: 25 KPDLSIST-KDRKEKIGERIVALQQLVSPYGKTDTSSVLKEAMDYIGFLHKQVKLLSAPY 83
Query: 249 LGSGSGN-MRHQQSVQGDQRN-CIFP 272
L + ++ +S R CI P
Sbjct: 84 LETAPATQLQDTESCSLRSRGLCIVP 109
>Medtr4g087300.3 | BHLH transcription factor-like protein | HC |
chr4:34241844-34246655 | 20130731
Length = 163
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 189 QPSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPY 248
+P + ST K RKEK+G+RI AL QLVSP+GKTDT+SVL EA+ YI FL Q+ LS PY
Sbjct: 48 KPDLSIST-KDRKEKIGERIVALQQLVSPYGKTDTSSVLKEAMDYIGFLHKQL--LSAPY 104
Query: 249 LGSGSGN-MRHQQSVQGDQRN-CIFP 272
L + ++ +S R CI P
Sbjct: 105 LETAPATQLQDTESCSLRSRGLCIVP 130
>Medtr4g131160.1 | BHLH transcription factor | HC |
chr4:54719229-54715702 | 20130731
Length = 400
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 198 KVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSGSG 254
++R+E++ +R+ AL +LV KTD AS+L E I Y++FLQ Q++ LS+ LG G+G
Sbjct: 212 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVLSMSRLG-GAG 267
>Medtr4g131160.2 | BHLH transcription factor | HC |
chr4:54719229-54715448 | 20130731
Length = 403
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 198 KVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSGSG 254
++R+E++ +R+ AL +LV KTD AS+L E I Y++FLQ Q++ LS+ LG G+G
Sbjct: 215 RLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVLSMSRLG-GAG 270
>Medtr1g080890.1 | transcription factor UNE12-like protein | HC |
chr1:36000358-35993128 | 20130731
Length = 355
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 198 KVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGSGSG 254
++R+E++ +R+ AL +LV KTD A++L E + Y++FL+ Q++ LS+ LG G+G
Sbjct: 209 RLRRERIAERMKALQELVPSINKTDKAAMLDEIVDYVKFLRLQVKVLSMSRLG-GAG 264
>Medtr1g018090.1 | helix loop helix DNA-binding domain protein | LC
| chr1:5273706-5271864 | 20130731
Length = 366
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 169 DPSSECNSTG----AGGAFKKARVQPSTTQSTF-KVRKEKLGDRITALHQLVSPFGKTDT 223
D +S+ NS G + G + +R + QS + + R+E++ +R+ L LV K D
Sbjct: 256 DNASQENSGGTTLNSNGKTRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKVDI 315
Query: 224 ASVLLEAIGYIRFLQSQIEALS 245
+++L EA+ Y++FLQ+QI+ LS
Sbjct: 316 STMLEEAVNYVKFLQTQIKLLS 337