Miyakogusa Predicted Gene

Lj0g3v0105569.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0105569.1 Non Characterized Hit- tr|K4BIC1|K4BIC1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,39.5,0.00000000000009,seg,NULL; DUF1674,Protein of unknown
function DUF1674,CUFF.6015.1
         (115 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g109290.1 | DUF1674 family protein | HC | chr3:50531622-50...   127   2e-30

>Medtr3g109290.1 | DUF1674 family protein | HC |
           chr3:50531622-50532510 | 20130731
          Length = 116

 Score =  127 bits (319), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/117 (62%), Positives = 80/117 (68%), Gaps = 3/117 (2%)

Query: 1   MATSFPRWLSSVA-NPALTRTGSEQLTRSVSNSVTRFLCSSSTQQHTENPVTEQAQEPR- 58
           M TSFPR LS+ A NP L RTGS+ LTRSVSNSVTR L SSS+  H  N   EQ Q P+ 
Sbjct: 1   MTTSFPRLLSTTASNPTLFRTGSDHLTRSVSNSVTRLLFSSSSSTHHHNE-KEQTQTPKP 59

Query: 59  ESLPDESKQTRXXXXXXXXXXXXXXXXNKETGEVGGPKGPEPTRYGDWERNGRCSDF 115
           ESL D+ KQ++                NKETGEVGGPKGPEPTRYGDWERNGRCSDF
Sbjct: 60  ESLHDDDKQSQKEEEEEEEDNDDDIDMNKETGEVGGPKGPEPTRYGDWERNGRCSDF 116