Miyakogusa Predicted Gene

Lj0g3v0105219.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0105219.1 Non Characterized Hit- tr|D7SVD6|D7SVD6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,30.95,0.0000000000008,HMA,Heavy metal-associated domain, HMA;
HMA_2,Heavy metal-associated domain, HMA; HMA, heavy
metal-a,CUFF.5989.1
         (253 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g018790.1 | heavy-metal-associated domain protein | LC | c...   115   4e-26
Medtr4g117220.1 | heavy metal-associated domain protein | HC | c...    64   1e-10
Medtr4g117140.1 | heavy metal-associated domain protein | LC | c...    64   2e-10
Medtr2g022250.1 | heavy metal transport/detoxification domain pr...    63   2e-10
Medtr1g082650.1 | heavy-metal-associated domain protein | HC | c...    57   1e-08
Medtr1g107565.1 | heavy metal-associated domain protein | HC | c...    55   6e-08
Medtr1g107565.2 | heavy metal-associated domain protein | HC | c...    55   6e-08
Medtr2g022240.1 | heavy metal transport/detoxification domain pr...    53   2e-07
Medtr7g113110.1 | heavy metal transport/detoxification superfami...    52   6e-07
Medtr1g092670.1 | copper chaperone | HC | chr1:41728751-41726269...    52   7e-07
Medtr7g013660.1 | copper chaperone | HC | chr7:3949006-3946807 |...    51   1e-06
Medtr1g083310.1 | heavy-metal-associated domain protein | HC | c...    51   1e-06
Medtr4g119820.1 | heavy-metal-associated domain protein | HC | c...    50   1e-06
Medtr1g078090.1 | heavy metal transport/detoxification superfami...    50   3e-06
Medtr7g108560.1 | heavy-metal-associated domain protein | HC | c...    49   4e-06
Medtr6g026890.1 | heavy metal transport/detoxification superfami...    49   4e-06
Medtr3g067750.1 | heavy-metal-associated domain protein | HC | c...    49   5e-06

>Medtr2g018790.1 | heavy-metal-associated domain protein | LC |
           chr2:5981840-5982909 | 20130731
          Length = 291

 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 84/120 (70%), Gaps = 2/120 (1%)

Query: 1   MEDNLESPISTLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLV 60
           M++  E PI TLKVDFGC+  C +DVK  LQ+LKGVK+IS+DP +GKV V GNV+PM+L+
Sbjct: 1   MKNTAELPICTLKVDFGCTNGCHSDVKKTLQELKGVKTISVDPKQGKVIVVGNVNPMMLI 60

Query: 61  KLLQKMGKKAKLWSFDQGPMQKRSGSSHSKQKDTSHGCCEGCHSENDSDTDSDHDCVHRT 120
           KLL+K+G+KA+L S  Q P +K +G SH+K+K  S  C E   +E + +    +   H+T
Sbjct: 61  KLLRKIGRKAQLCSL-QEPKEKGAG-SHAKKKHHSRRCHESSDTEEEYEAKQVYGHNHKT 118


>Medtr4g117220.1 | heavy metal-associated domain protein | HC |
          chr4:48574411-48571845 | 20130731
          Length = 512

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 1/74 (1%)

Query: 2  EDNLESPISTLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVK 61
          E+ L+   S LKV+  C   C + VK +LQ++ GV +  ID  +GKVTV+GNV P VL+K
Sbjct: 4  EEFLKIQKSVLKVNIHCD-GCKHKVKKILQKIDGVFTTEIDAEQGKVTVSGNVDPNVLIK 62

Query: 62 LLQKMGKKAKLWSF 75
           L K GK A+LWS 
Sbjct: 63 KLAKSGKHAQLWSV 76


>Medtr4g117140.1 | heavy metal-associated domain protein | LC |
          chr4:48540301-48537622 | 20130731
          Length = 527

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 1/74 (1%)

Query: 2  EDNLESPISTLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVK 61
          E+ L+   S LKV+  C   C + VK +LQ++ GV +  ID  +GKVTV+GNV P VL+K
Sbjct: 4  EEFLKIQKSVLKVNIHCD-GCKHKVKKILQKIDGVFTTEIDAEQGKVTVSGNVDPNVLIK 62

Query: 62 LLQKMGKKAKLWSF 75
           L K GK A+LWS 
Sbjct: 63 KLAKSGKHAQLWSV 76


>Medtr2g022250.1 | heavy metal transport/detoxification domain
          protein | LC | chr2:7655793-7658635 | 20130731
          Length = 494

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 1/72 (1%)

Query: 2  EDNLESPISTLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVK 61
          E+ L+   S LKV+  C   C   VK +LQ++ GV +  ID  +GKVTV+GNV P VL+K
Sbjct: 4  EEILKIQKSVLKVNIHCD-GCKQKVKKILQKIDGVFATEIDAEQGKVTVSGNVDPNVLIK 62

Query: 62 LLQKMGKKAKLW 73
           L K GK A+LW
Sbjct: 63 KLAKSGKHAELW 74


>Medtr1g082650.1 | heavy-metal-associated domain protein | HC |
          chr1:36784577-36787395 | 20130731
          Length = 577

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 12 LKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKAK 71
          LKV+  C + C   VK +LQ+++GV S++ID  +GKV V G+V P  L+K L+  GK A+
Sbjct: 14 LKVNIHC-EGCEQKVKKLLQKIEGVYSVNIDAEQGKVLVTGDVDPAKLLKKLKSSGKHAE 72

Query: 72 LWS 74
          LW 
Sbjct: 73 LWG 75


>Medtr1g107565.1 | heavy metal-associated domain protein | HC |
          chr1:48895819-48893576 | 20130731
          Length = 374

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 11 TLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKA 70
           LKV+  C   C   VK +LQ+++GV  + ID  + KVTV+G+V    L+K L + GK A
Sbjct: 16 VLKVNIHCD-GCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDAATLIKKLVRSGKYA 74

Query: 71 KLWS 74
          +LWS
Sbjct: 75 ELWS 78


>Medtr1g107565.2 | heavy metal-associated domain protein | HC |
          chr1:48896065-48893528 | 20130731
          Length = 374

 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 11 TLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKA 70
           LKV+  C   C   VK +LQ+++GV  + ID  + KVTV+G+V    L+K L + GK A
Sbjct: 16 VLKVNIHCD-GCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGSVDAATLIKKLVRSGKYA 74

Query: 71 KLWS 74
          +LWS
Sbjct: 75 ELWS 78


>Medtr2g022240.1 | heavy metal transport/detoxification domain
          protein | LC | chr2:7650750-7652903 | 20130731
          Length = 478

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)

Query: 2  EDNLESPISTLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVK 61
          E+ L+     LKV+  C   C   VK  LQ++ GV +I ID  +GKV VAGN+ P VL+K
Sbjct: 4  EEILKIQKCVLKVNMHCD-GCKKKVKKTLQKIDGVYTIEIDIEQGKVIVAGNIDPDVLIK 62

Query: 62 LLQKMGKKAKLW 73
           L K  K A+LW
Sbjct: 63 KLAKSKKHAELW 74


>Medtr7g113110.1 | heavy metal transport/detoxification
          superfamily protein | HC | chr7:46557614-46555948 |
          20130731
          Length = 365

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 11 TLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKA 70
          TL+V   C + C   VK +LQ + GV   +ID  + KV V G V    L+K+L + GK+A
Sbjct: 36 TLRVSIHC-QGCMRKVKKVLQSIDGVYQTTIDLKQQKVEVKGTVDTDTLIKILTQTGKRA 94

Query: 71 KLW 73
          +LW
Sbjct: 95 ELW 97


>Medtr1g092670.1 | copper chaperone | HC | chr1:41728751-41726269
          | 20130731
          Length = 79

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 5  LESPISTLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQ 64
          + S   TLKV   C + C   VK +L +L GV+S  ID  E KV V GNV P  ++K + 
Sbjct: 1  MSSQTVTLKVGMSC-EGCVGAVKRVLGKLDGVESYDIDLKEQKVVVKGNVEPDTVLKTVS 59

Query: 65 KMGKKAKLW 73
          K GK    W
Sbjct: 60 KTGKPTAFW 68


>Medtr7g013660.1 | copper chaperone | HC | chr7:3949006-3946807 |
          20130731
          Length = 126

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)

Query: 12 LKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKAK 71
          LKV   CS  C   V  +L++++GV+S  ID  E KVTV GNV P  +   + K GKK +
Sbjct: 8  LKVKMSCS-GCSGAVNRVLEKMEGVESFDIDMKEQKVTVKGNVKPQDVFDTVSKTGKKTE 66

Query: 72 LW 73
           W
Sbjct: 67 FW 68


>Medtr1g083310.1 | heavy-metal-associated domain protein | HC |
          chr1:37074275-37076231 | 20130731
          Length = 402

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 2  EDNLESPISTLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLV- 60
          E +L    + LKV   C   C   V  +LQ ++GV+ I+ID  + KV V GNV+  +L+ 
Sbjct: 9  EQHLNYKTTVLKVSIHCV-GCKRKVHKILQAIQGVQDINIDLRQQKVIVTGNVNSDILIH 67

Query: 61 KLLQKMGKKAKLW 73
          KL  K GK  +LW
Sbjct: 68 KLASKTGKHVELW 80


>Medtr4g119820.1 | heavy-metal-associated domain protein | HC |
           chr4:49653239-49654929 | 20130731
          Length = 358

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 12  LKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKAK 71
           LKV   C + C   VK +LQ + GV + +IDP + KVTV GNV    L++ L K GK A+
Sbjct: 78  LKVSIHC-EGCRRKVKKVLQSIDGVFTTTIDPQQNKVTVTGNVALETLIRKLAKAGKHAE 136

Query: 72  L 72
           +
Sbjct: 137 V 137


>Medtr1g078090.1 | heavy metal transport/detoxification superfamily
           protein | HC | chr1:34943166-34947205 | 20130731
          Length = 185

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 5/92 (5%)

Query: 8   PISTLKVDFG---CSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQ 64
           PIS   V+     C   C   VK  + +LKG+ S+ +D    +VTV G V    ++K ++
Sbjct: 49  PISLQTVELKVRMCCTGCERVVKNAIYKLKGIDSVKVDLEMERVTVTGYVERNKVLKAVR 108

Query: 65  KMGKKAKLWSFDQGPMQKRSGSSHSKQKDTSH 96
           + GK+A+ W +   P+   S S +   KDT++
Sbjct: 109 RSGKRAEFWPYPNPPLYFTSASHY--YKDTTN 138


>Medtr7g108560.1 | heavy-metal-associated domain protein | HC |
          chr7:44226657-44228944 | 20130731
          Length = 306

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 11 TLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGKKA 70
           LKV   C   C   VK +LQ ++GV    ID  + KVTV GNV    L+K L + GK  
Sbjct: 25 VLKVLIHCD-GCTKRVKKILQGIEGVYRTEIDSRQHKVTVTGNVDAETLIKKLSRSGKSV 83

Query: 71 KLW 73
          +LW
Sbjct: 84 ELW 86


>Medtr6g026890.1 | heavy metal transport/detoxification
          superfamily protein | HC | chr6:9080776-9082835 |
          20130731
          Length = 148

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 9  ISTLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKLLQKMGK 68
          I  LKV   C + C   ++ ++ +L GV S+ ID    KVTV G V    ++++++K G+
Sbjct: 17 IVELKVHMDC-QGCEERIRRVISKLNGVDSLEIDMENQKVTVTGYVDKSKVLRMVRKTGR 75

Query: 69 KAKLWSF 75
          KA+ W F
Sbjct: 76 KAEYWPF 82


>Medtr3g067750.1 | heavy-metal-associated domain protein | HC |
          chr3:30384596-30382606 | 20130731
          Length = 212

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 3  DNLESPISTLKVDFGCSKNCPNDVKIMLQQLKGVKSISIDPSEGKVTVAGNVHPMVLVKL 62
          ++L++    LKV   C + C   V+  L++++GV  + I+    KV V G V+P  LV+ 
Sbjct: 7  ESLKTETFVLKVHINC-QGCRTKVRKALRKIEGVYEVDINAENQKVAVTGVVNPSTLVQK 65

Query: 63 LQKMGKKAKLWSFD 76
          L K+GK A++ + D
Sbjct: 66 LAKLGKHAEILNED 79