Miyakogusa Predicted Gene

Lj0g3v0105159.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0105159.1 tr|A9RQS3|A9RQS3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_160518,32.35,0.000000000000002,no description,PLC-like
phosphodiesterase, TIM beta/alpha-barrel domain; seg,NULL; PLC-like
phosphod,CUFF.5985.1
         (256 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g131380.1 | glycerophosphoryl diester phosphodiesterase fa...   343   9e-95
Medtr2g450160.1 | glycerophosphoryl diester phosphodiesterase fa...   323   9e-89
Medtr5g094230.2 | glycerophosphoryl diester phosphodiesterase fa...   200   1e-51
Medtr5g094230.1 | glycerophosphoryl diester phosphodiesterase fa...   199   2e-51
Medtr3g055610.1 | glycerophosphoryl diester phosphodiesterase fa...   160   2e-39

>Medtr4g131380.1 | glycerophosphoryl diester phosphodiesterase
           family protein | HC | chr4:54814382-54810438 | 20130731
          Length = 753

 Score =  343 bits (880), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 166/242 (68%), Positives = 196/242 (80%), Gaps = 1/242 (0%)

Query: 2   DVKGHFSVDYTTAQIDQNVSMTQALFTRPGFYDGAGPVLNVDAILSLQSPPRFWLNVQNA 61
           DV+GHFS DY+  QI+ +V MTQA+F+RP F+DG  PV NVDA+LS ++PP+FWLNVQNA
Sbjct: 123 DVQGHFSTDYSGVQIENDVKMTQAIFSRPDFFDGVFPVANVDALLSTKTPPKFWLNVQNA 182

Query: 62  AFYTQQGLKVVDIVLDMLRVYPAIEIVSSPDIGFLKGISGKTNKATKVIFQLLQSNDVEP 121
            FYTQ G K V++VL++LR  P ++ VSSPDIGFLK I+ + NKATKV+FQLL + DVEP
Sbjct: 183 GFYTQYGKKAVEVVLEILRALP-VDFVSSPDIGFLKSIARQPNKATKVVFQLLNAMDVEP 241

Query: 122 LTKKPYGTVVKDLAAIKLFASGIMVPKEYIWPVKPDKYLGLPTTLVADAHKSGLEVFASG 181
            TK+PYG ++KDL AIK FASGIMVPKE+I PVKPDKYLGLPTTLVADAHK GLEV+ASG
Sbjct: 242 QTKQPYGIIIKDLVAIKSFASGIMVPKEFILPVKPDKYLGLPTTLVADAHKLGLEVYASG 301

Query: 182 FAXXXXXXXXXXXXPTAEYLQFIDHGDSVDGVVTDFPTTASNAIACFAHNNTLPRKGILI 241
           FA            PTAEYLQFID  DSVDGVVTDFPTTASNAI CFAHNNTLP+KG  +
Sbjct: 302 FANDLFSSYSYNYDPTAEYLQFIDSRDSVDGVVTDFPTTASNAIGCFAHNNTLPKKGPTL 361

Query: 242 LL 243
           ++
Sbjct: 362 II 363


>Medtr2g450160.1 | glycerophosphoryl diester phosphodiesterase
           family protein | HC | chr2:22117367-22124550 | 20130731
          Length = 912

 Score =  323 bits (828), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 159/243 (65%), Positives = 188/243 (77%), Gaps = 2/243 (0%)

Query: 2   DVKGHFSVDYTTAQIDQNVSMTQALFTRPGFYDGAGPVLNVDAILSLQSPPRFWLNVQNA 61
           DVKGHF VDYT AQI  NVSM QA+F+RP FYDG    LN D +LS ++PPRFWLNVQ  
Sbjct: 275 DVKGHFMVDYTGAQIYDNVSMNQAIFSRPDFYDGMSAALNADDVLSGKTPPRFWLNVQYE 334

Query: 62  AFYTQQGLKVVDIVLDMLRVYPAIEIVSSPDIGFLKGISGKTNK-ATKVIFQLLQSNDVE 120
           AFY Q G+++VDIVL+ML +Y  I+ VSSP+IGFL+ I+GK NK  TKV+FQ L  NDVE
Sbjct: 335 AFYNQHGVQLVDIVLEMLTLY-KIDFVSSPEIGFLRSINGKVNKMKTKVVFQFLNGNDVE 393

Query: 121 PLTKKPYGTVVKDLAAIKLFASGIMVPKEYIWPVKPDKYLGLPTTLVADAHKSGLEVFAS 180
           P T + Y T+VKDLAAIK +ASGIMVPKEYIWPVKPDKYLG PTTLV DAHK GLEV+A+
Sbjct: 394 PTTNQSYSTIVKDLAAIKSYASGIMVPKEYIWPVKPDKYLGPPTTLVPDAHKQGLEVYAT 453

Query: 181 GFAXXXXXXXXXXXXPTAEYLQFIDHGDSVDGVVTDFPTTASNAIACFAHNNTLPRKGIL 240
           GFA            PTAEYLQFI  G+SVDG+VTDFP+ ASN+IACFA NNT+ +KG  
Sbjct: 454 GFANDFFTSYSYNYDPTAEYLQFIVKGESVDGLVTDFPSGASNSIACFAQNNTMLKKGQA 513

Query: 241 ILL 243
           +++
Sbjct: 514 LII 516


>Medtr5g094230.2 | glycerophosphoryl diester phosphodiesterase
           family protein | HC | chr5:41156721-41162982 | 20130731
          Length = 659

 Score =  200 bits (508), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 113/245 (46%), Positives = 154/245 (62%), Gaps = 9/245 (3%)

Query: 5   GHFSVDYTTAQIDQNVSMTQALFTRPGFYDGAGPVLN-VDAILSLQSP--PRFWLNVQNA 61
           G+FSVDY+   +   V++TQ +F+R    DG   ++N VD +L L +P  P  WLN+Q+ 
Sbjct: 116 GYFSVDYSFEDL-STVTVTQGVFSRSPLLDGNNFIINTVDEVLKLVAPQTPGLWLNIQHD 174

Query: 62  AFYTQQGLKVVDIVLDMLRVYPAIEIVSSPDIGFLKGISGKTN-KATKVIFQLLQSNDVE 120
           AFY+Q  L +   VL + R    +  +SSP+ GFL+ I+ + N K TK++F+ L   D +
Sbjct: 175 AFYSQHNLSMRSFVLAVSRRL-HVSYISSPEAGFLRSITKRFNPKTTKLVFRFLNQEDTD 233

Query: 121 PLTKKPYGTVVKDLAAIKLFASGIMVPKEYIWPVKPDKYLGLPTTLVADAHKSGLEVFAS 180
           P T + YG+ +K+L  IK FASGI+VPK YIWPV    YL   T+LV+DAHK+GLEVFA+
Sbjct: 234 PSTNQTYGSFLKNLTFIKTFASGILVPKGYIWPVDASLYLQPHTSLVSDAHKAGLEVFAA 293

Query: 181 GFAXXXXXXXXXXXXPTAEYLQFIDHGD-SVDGVVTDFPTTASNAIACFAH--NNTLPRK 237
            F+            P AE LQFID+G+ +VDGV+TDFP T S AI CFAH  NN   R 
Sbjct: 294 DFSNDIVISYNYSFDPLAESLQFIDNGEFTVDGVLTDFPLTPSAAIDCFAHIGNNATRRD 353

Query: 238 GILIL 242
             LI+
Sbjct: 354 KTLII 358


>Medtr5g094230.1 | glycerophosphoryl diester phosphodiesterase
           family protein | HC | chr5:41156686-41163105 | 20130731
          Length = 754

 Score =  199 bits (506), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/245 (46%), Positives = 154/245 (62%), Gaps = 9/245 (3%)

Query: 5   GHFSVDYTTAQIDQNVSMTQALFTRPGFYDGAGPVLN-VDAILSLQSP--PRFWLNVQNA 61
           G+FSVDY+   +   V++TQ +F+R    DG   ++N VD +L L +P  P  WLN+Q+ 
Sbjct: 116 GYFSVDYSFEDL-STVTVTQGVFSRSPLLDGNNFIINTVDEVLKLVAPQTPGLWLNIQHD 174

Query: 62  AFYTQQGLKVVDIVLDMLRVYPAIEIVSSPDIGFLKGISGKTN-KATKVIFQLLQSNDVE 120
           AFY+Q  L +   VL + R    +  +SSP+ GFL+ I+ + N K TK++F+ L   D +
Sbjct: 175 AFYSQHNLSMRSFVLAVSRRL-HVSYISSPEAGFLRSITKRFNPKTTKLVFRFLNQEDTD 233

Query: 121 PLTKKPYGTVVKDLAAIKLFASGIMVPKEYIWPVKPDKYLGLPTTLVADAHKSGLEVFAS 180
           P T + YG+ +K+L  IK FASGI+VPK YIWPV    YL   T+LV+DAHK+GLEVFA+
Sbjct: 234 PSTNQTYGSFLKNLTFIKTFASGILVPKGYIWPVDASLYLQPHTSLVSDAHKAGLEVFAA 293

Query: 181 GFAXXXXXXXXXXXXPTAEYLQFIDHGD-SVDGVVTDFPTTASNAIACFAH--NNTLPRK 237
            F+            P AE LQFID+G+ +VDGV+TDFP T S AI CFAH  NN   R 
Sbjct: 294 DFSNDIVISYNYSFDPLAESLQFIDNGEFTVDGVLTDFPLTPSAAIDCFAHIGNNATRRD 353

Query: 238 GILIL 242
             LI+
Sbjct: 354 KTLII 358


>Medtr3g055610.1 | glycerophosphoryl diester phosphodiesterase
           family protein | HC | chr3:21889362-21884439 | 20130731
          Length = 717

 Score =  160 bits (404), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/248 (38%), Positives = 138/248 (55%), Gaps = 6/248 (2%)

Query: 4   KGHFSVDYTTAQIDQNVSMTQALFTRPGFYDGAGP-VLNVDAILSL--QSPPRFWLNVQN 60
           +G FS D+   ++ Q VS+ Q +++R   +DG+   +L+V+ +  L   S    WLNVQ+
Sbjct: 114 RGWFSFDFNFKEL-QIVSLVQGVYSRTPKFDGSNYYILSVENVAKLVKSSSAGLWLNVQH 172

Query: 61  AAFYTQQGLKVVDIVLDMLRVYPAIEIVSSPDIGFLKGISGKTN-KATKVIFQLLQSNDV 119
             FY    L V   +  +      I  +SSP+  FL+ +  K++ K T  +F+ L    +
Sbjct: 173 DTFYKHHNLSVEKYLHSLSAEKVTISYISSPNANFLQRVRKKSSLKKTVTVFRFLDQYKI 232

Query: 120 EPLTKKPYGTVVKDLAAIKLFASGIMVPKEYIWPVKPDKYLGLPTTLVADAHKSGLEVFA 179
           EP + K YG ++K L  I+ FASGI+VPK YIW V  + YL   T+LV+DAHK GL+VF 
Sbjct: 233 EPTSNKTYGALLKHLKFIRTFASGILVPKSYIWSVDSELYLHQHTSLVSDAHKHGLKVFV 292

Query: 180 SGFAXXXXXXXXXXXXPTAEYLQFIDHGD-SVDGVVTDFPTTASNAIACFAHNNTLPRKG 238
           S               P AE L FID+G+ SVDGV++DFP T S AI CFA      +K 
Sbjct: 293 SDIVNDVPFSYNFSYDPMAEVLSFIDNGNFSVDGVLSDFPVTPSAAINCFAGIGRNAKKQ 352

Query: 239 ILILLIPK 246
           +  L+I K
Sbjct: 353 VETLIITK 360