Miyakogusa Predicted Gene

Lj0g3v0104949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0104949.1 Non Characterized Hit- tr|I1M307|I1M307_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11277
PE,73.81,0.0000000003,seg,NULL,12821_g.1
         (80 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g076590.1 | epidermis-specific secreted EP1-like glycoprot...    47   5e-06
Medtr2g076490.1 | epidermis-specific secreted EP1-like glycoprot...    47   6e-06

>Medtr2g076590.1 | epidermis-specific secreted EP1-like
          glycoprotein | HC | chr2:32063871-32065553 | 20130731
          Length = 438

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/26 (76%), Positives = 23/26 (88%)

Query: 25 VVPQNETFKFENSGELGPYIVEYGGK 50
          +VPQNETFKF NSG+LG +IVEYGG 
Sbjct: 27 IVPQNETFKFVNSGDLGDFIVEYGGD 52


>Medtr2g076490.1 | epidermis-specific secreted EP1-like
          glycoprotein | HC | chr2:32030843-32032739 | 20130731
          Length = 492

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/25 (80%), Positives = 23/25 (92%)

Query: 25 VVPQNETFKFENSGELGPYIVEYGG 49
          +VPQNETFKF NSG+LG +IVEYGG
Sbjct: 27 IVPQNETFKFVNSGDLGDFIVEYGG 51