Miyakogusa Predicted Gene

Lj0g3v0104939.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0104939.2 Non Characterized Hit- tr|I1MS55|I1MS55_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37875 PE,70,0.00000007,
,CUFF.5969.2
         (42 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g124900.2 | auxin response factor 2 | HC | chr4:51795315-5...    53   5e-08
Medtr4g124900.1 | auxin response factor 2 | HC | chr4:51795315-5...    53   5e-08
Medtr2g043250.2 | auxin response factor 2 | HC | chr2:18843083-1...    52   2e-07
Medtr2g043250.1 | auxin response factor 2 | HC | chr2:18843526-1...    52   2e-07

>Medtr4g124900.2 | auxin response factor 2 | HC |
           chr4:51795315-51802487 | 20130731
          Length = 1097

 Score = 53.1 bits (126), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/40 (62%), Positives = 29/40 (72%)

Query: 1   MPDDEYDLENAFKRAVPWLEGGFVMKDELSSVFDVFSLLQ 40
           MPDD  D+EN+FKRA+PWL   F MKD  SSVF   SL+Q
Sbjct: 379 MPDDGSDVENSFKRAMPWLGDDFGMKDASSSVFPGLSLVQ 418


>Medtr4g124900.1 | auxin response factor 2 | HC |
           chr4:51795315-51802487 | 20130731
          Length = 1120

 Score = 53.1 bits (126), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/40 (62%), Positives = 29/40 (72%)

Query: 1   MPDDEYDLENAFKRAVPWLEGGFVMKDELSSVFDVFSLLQ 40
           MPDD  D+EN+FKRA+PWL   F MKD  SSVF   SL+Q
Sbjct: 379 MPDDGSDVENSFKRAMPWLGDDFGMKDASSSVFPGLSLVQ 418


>Medtr2g043250.2 | auxin response factor 2 | HC |
           chr2:18843083-18835022 | 20130731
          Length = 1114

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/40 (60%), Positives = 29/40 (72%)

Query: 1   MPDDEYDLENAFKRAVPWLEGGFVMKDELSSVFDVFSLLQ 40
           MP+DE ++ENAFKRA+PWL     MKD  SSVF   SL+Q
Sbjct: 379 MPEDESEIENAFKRAMPWLGDELGMKDTSSSVFPGLSLVQ 418


>Medtr2g043250.1 | auxin response factor 2 | HC |
           chr2:18843526-18835022 | 20130731
          Length = 1114

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/40 (60%), Positives = 29/40 (72%)

Query: 1   MPDDEYDLENAFKRAVPWLEGGFVMKDELSSVFDVFSLLQ 40
           MP+DE ++ENAFKRA+PWL     MKD  SSVF   SL+Q
Sbjct: 379 MPEDESEIENAFKRAMPWLGDELGMKDTSSSVFPGLSLVQ 418