Miyakogusa Predicted Gene

Lj0g3v0104719.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0104719.2 Non Characterized Hit- tr|Q6ZI97|Q6ZI97_ORYSJ
Putative uncharacterized protein OJ1770_H02.35
OS=Oryz,47.9,4e-17,seg,NULL,CUFF.5948.2
         (128 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g089170.2 | HCaRG protein | HC | chr3:33883138-33885395 | ...   170   3e-43
Medtr3g089170.1 | HCaRG protein | HC | chr3:33881665-33885393 | ...   170   3e-43
Medtr7g087480.1 | hypothetical protein | HC | chr7:34052848-3405...    61   3e-10

>Medtr3g089170.2 | HCaRG protein | HC | chr3:33883138-33885395 |
           20130731
          Length = 193

 Score =  170 bits (430), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 91/128 (71%), Positives = 101/128 (78%), Gaps = 1/128 (0%)

Query: 1   MLIRRCVYENISKDDIPKLFPGDVXXXXXXXXXXXXHKFQQEWQEDVLKDQNIVPRLKAM 60
           MLIRRCVYEN  KDD PKLFP +V             KFQQ+WQEDVLKDQNIVPRLKAM
Sbjct: 65  MLIRRCVYENTCKDDYPKLFPSEVLPELQKLLTLLLQKFQQQWQEDVLKDQNIVPRLKAM 124

Query: 61  TWNMTNQDKESTDPAAAINLKLQSDARFHTGELDVKFQLATDSLEMMLKAMYNVRDQFST 120
           TWNM +QD E +DP A INLKLQ+DARFH+GELD+KFQLATDS+EMMLK M+N+RDQFS 
Sbjct: 125 TWNMADQDTELSDPTAVINLKLQNDARFHSGELDLKFQLATDSVEMMLKEMHNMRDQFSA 184

Query: 121 M-DEVPNG 127
           M DE P G
Sbjct: 185 MEDEAPKG 192


>Medtr3g089170.1 | HCaRG protein | HC | chr3:33881665-33885393 |
           20130731
          Length = 193

 Score =  170 bits (430), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 91/128 (71%), Positives = 101/128 (78%), Gaps = 1/128 (0%)

Query: 1   MLIRRCVYENISKDDIPKLFPGDVXXXXXXXXXXXXHKFQQEWQEDVLKDQNIVPRLKAM 60
           MLIRRCVYEN  KDD PKLFP +V             KFQQ+WQEDVLKDQNIVPRLKAM
Sbjct: 65  MLIRRCVYENTCKDDYPKLFPSEVLPELQKLLTLLLQKFQQQWQEDVLKDQNIVPRLKAM 124

Query: 61  TWNMTNQDKESTDPAAAINLKLQSDARFHTGELDVKFQLATDSLEMMLKAMYNVRDQFST 120
           TWNM +QD E +DP A INLKLQ+DARFH+GELD+KFQLATDS+EMMLK M+N+RDQFS 
Sbjct: 125 TWNMADQDTELSDPTAVINLKLQNDARFHSGELDLKFQLATDSVEMMLKEMHNMRDQFSA 184

Query: 121 M-DEVPNG 127
           M DE P G
Sbjct: 185 MEDEAPKG 192


>Medtr7g087480.1 | hypothetical protein | HC |
           chr7:34052848-34055798 | 20130731
          Length = 283

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 5/114 (4%)

Query: 14  DDIPKLFPGDVXXXXXXXXXXXXHKFQQEWQEDVLKDQNIV-----PRLKAMTWNMTNQD 68
           D + +L  GD+                  +Q D+   +N+V     P LK+MTW M ++ 
Sbjct: 158 DSLARLNCGDLGVPTSPVAEVNVSGLPTCFQCDITSSENLVLEESLPHLKSMTWTMESRG 217

Query: 69  KESTDPAAAINLKLQSDARFHTGELDVKFQLATDSLEMMLKAMYNVRDQFSTMD 122
               +  A I+LKL   ++   GE DVKFQL  D+LE MLK+M  V ++   ++
Sbjct: 218 SSPAERVAIISLKLHDYSKSTAGETDVKFQLTRDTLETMLKSMTFVGERLRAVE 271