Miyakogusa Predicted Gene

Lj0g3v0104559.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0104559.1 tr|Q5I6E1|Q5I6E1_VOLCA Arsenite-resistance
protein OS=Volvox carteri f. nagariensis PE=2
SV=1,22.91,3e-17,DUF3546,Protein of unknown function DUF3546;
ZINC_FINGER_C2H2_1,Zinc finger, C2H2; coiled-coil,NULL;,CUFF.6127.1
         (388 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g006760.2 | serrate RNA effector molecule-like protein | H...   597   e-171
Medtr3g006760.1 | serrate RNA effector molecule-like protein | H...   597   e-171
Medtr8g043980.1 | serrate RNA effector molecule-like protein | H...   565   e-161
Medtr2g084355.1 | serrate RNA effector molecule-like protein, pu...   253   3e-67

>Medtr3g006760.2 | serrate RNA effector molecule-like protein | HC |
           chr3:850762-844755 | 20130731
          Length = 591

 Score =  597 bits (1540), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 301/385 (78%), Positives = 327/385 (84%), Gaps = 1/385 (0%)

Query: 2   NRGYSDLPSGGAQREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKRAYFNAHK 61
           NRGY+DLPSGGA+REGLMSYKQFIQELEDD+LP+EAERRYQEYKSEYI+TQKRAYFN HK
Sbjct: 163 NRGYADLPSGGARREGLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAYFNTHK 222

Query: 62  DEEWLKDKYHPTNLLTVIERRNENARRVAKDFLLDLQSGTLDLNPGLNSSPPNKSGQASE 121
           D EWLKDKYHPTNLLTVIERRNENARR+AK+FLLDLQSGTLD+NPGLNS+   KS QA+E
Sbjct: 223 DAEWLKDKYHPTNLLTVIERRNENARRLAKEFLLDLQSGTLDINPGLNSAS-TKSEQATE 281

Query: 122 GNSEEETDASGKRRRHGRGSNNDNDFSAAPKAHPISSEXXXXXXXXXXXXXVVRKLDIEK 181
            NSEEETDA GKRRRHGRGSN DNDFSAAPKAHP+SSE             VVRKLD EK
Sbjct: 282 PNSEEETDAGGKRRRHGRGSNKDNDFSAAPKAHPVSSEPRRIQEDIHQVQAVVRKLDKEK 341

Query: 182 GIEDNILYTSDQSKNDDKAHSGSGGPIVIIRGLASVKGLEGVELLDTLITYLWRIHGIDY 241
           GIEDNIL T+D SKN DKA SGS GP+VIIRGL S+KGLEGVELLDTLITYLWRIHG+DY
Sbjct: 342 GIEDNILCTNDHSKNSDKARSGSVGPVVIIRGLTSIKGLEGVELLDTLITYLWRIHGVDY 401

Query: 242 YGMVETNEAKGFRHVRPDGTGHEEASKSGPEWEKKLDSFWQGRLNGQDPLDVMTAKEKID 301
           YGM+ET++AKGFRHVRP+G  HEE +KSG EWEKKLDSFWQ RL+G DPL+V TAKEKID
Sbjct: 402 YGMLETSDAKGFRHVRPEGARHEETAKSGSEWEKKLDSFWQRRLDGLDPLEVRTAKEKID 461

Query: 302 AAATDFLDPHVRKIRDEKYGWKYGCGAKGCTKLFHASESVXXXXXXXXXXXXXXXTAKLR 361
           AAA D LDP+VRKIRDEKYGWKYGCGAK CTKLFHA E V               T+KLR
Sbjct: 462 AAAADMLDPYVRKIRDEKYGWKYGCGAKSCTKLFHAVEFVYKHLKLKHPELVLELTSKLR 521

Query: 362 EDLYFQNYMNDSNAPGGTPIMQQPQ 386
           EDLYFQNYMND +APGGTP+MQQ Q
Sbjct: 522 EDLYFQNYMNDPDAPGGTPVMQQSQ 546


>Medtr3g006760.1 | serrate RNA effector molecule-like protein | HC |
           chr3:850770-843225 | 20130731
          Length = 704

 Score =  597 bits (1538), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 301/385 (78%), Positives = 327/385 (84%), Gaps = 1/385 (0%)

Query: 2   NRGYSDLPSGGAQREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKRAYFNAHK 61
           NRGY+DLPSGGA+REGLMSYKQFIQELEDD+LP+EAERRYQEYKSEYI+TQKRAYFN HK
Sbjct: 163 NRGYADLPSGGARREGLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAYFNTHK 222

Query: 62  DEEWLKDKYHPTNLLTVIERRNENARRVAKDFLLDLQSGTLDLNPGLNSSPPNKSGQASE 121
           D EWLKDKYHPTNLLTVIERRNENARR+AK+FLLDLQSGTLD+NPGLNS+   KS QA+E
Sbjct: 223 DAEWLKDKYHPTNLLTVIERRNENARRLAKEFLLDLQSGTLDINPGLNSAS-TKSEQATE 281

Query: 122 GNSEEETDASGKRRRHGRGSNNDNDFSAAPKAHPISSEXXXXXXXXXXXXXVVRKLDIEK 181
            NSEEETDA GKRRRHGRGSN DNDFSAAPKAHP+SSE             VVRKLD EK
Sbjct: 282 PNSEEETDAGGKRRRHGRGSNKDNDFSAAPKAHPVSSEPRRIQEDIHQVQAVVRKLDKEK 341

Query: 182 GIEDNILYTSDQSKNDDKAHSGSGGPIVIIRGLASVKGLEGVELLDTLITYLWRIHGIDY 241
           GIEDNIL T+D SKN DKA SGS GP+VIIRGL S+KGLEGVELLDTLITYLWRIHG+DY
Sbjct: 342 GIEDNILCTNDHSKNSDKARSGSVGPVVIIRGLTSIKGLEGVELLDTLITYLWRIHGVDY 401

Query: 242 YGMVETNEAKGFRHVRPDGTGHEEASKSGPEWEKKLDSFWQGRLNGQDPLDVMTAKEKID 301
           YGM+ET++AKGFRHVRP+G  HEE +KSG EWEKKLDSFWQ RL+G DPL+V TAKEKID
Sbjct: 402 YGMLETSDAKGFRHVRPEGARHEETAKSGSEWEKKLDSFWQRRLDGLDPLEVRTAKEKID 461

Query: 302 AAATDFLDPHVRKIRDEKYGWKYGCGAKGCTKLFHASESVXXXXXXXXXXXXXXXTAKLR 361
           AAA D LDP+VRKIRDEKYGWKYGCGAK CTKLFHA E V               T+KLR
Sbjct: 462 AAAADMLDPYVRKIRDEKYGWKYGCGAKSCTKLFHAVEFVYKHLKLKHPELVLELTSKLR 521

Query: 362 EDLYFQNYMNDSNAPGGTPIMQQPQ 386
           EDLYFQNYMND +APGGTP+MQQ Q
Sbjct: 522 EDLYFQNYMNDPDAPGGTPVMQQSQ 546


>Medtr8g043980.1 | serrate RNA effector molecule-like protein | HC |
           chr8:16823584-16831186 | 20130731
          Length = 746

 Score =  565 bits (1455), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 281/385 (72%), Positives = 308/385 (80%), Gaps = 20/385 (5%)

Query: 2   NRGYSDLPSGGAQREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKRAYFNAHK 61
           NRGY+DLPSGG QREGLMSYKQFIQELEDD+LP EAERRYQEYKSEYISTQKRAYF+AHK
Sbjct: 215 NRGYADLPSGGGQREGLMSYKQFIQELEDDILPTEAERRYQEYKSEYISTQKRAYFSAHK 274

Query: 62  DEEWLKDKYHPTNLLTVIERRNENARRVAKDFLLDLQSGTLDLNPGLNSSPPNKSGQASE 121
           DEEWLKDKYHPTNLLTVIERRNE+AR++AKDFLLDLQSGTLD NPGL++S  +KSGQASE
Sbjct: 275 DEEWLKDKYHPTNLLTVIERRNESARQLAKDFLLDLQSGTLDPNPGLSASLSSKSGQASE 334

Query: 122 GNSEEETDASGKRRRHGRGSNNDNDFSAAPKAHPISSEXXXXXXXXXXXXXVVRKLDIEK 181
            NSEEE  A  +RRR G GSN  +DFSAAPKAHP+SSE             +VRKLD EK
Sbjct: 335 PNSEEE--AEDQRRRDGWGSNKKSDFSAAPKAHPVSSEPRRIQADVQQAQALVRKLDTEK 392

Query: 182 GIEDNILYTSDQSKNDDKAHSGSGGPIVIIRGLASVKGLEGVELLDTLITYLWRIHGIDY 241
            I DNIL +                  +IIRGL SVKGLEGVELLDTLITYLWRIHG+DY
Sbjct: 393 RIGDNILCS------------------IIIRGLTSVKGLEGVELLDTLITYLWRIHGVDY 434

Query: 242 YGMVETNEAKGFRHVRPDGTGHEEASKSGPEWEKKLDSFWQGRLNGQDPLDVMTAKEKID 301
           YGM+ETNEAKGFRHVRP+  GHEE  KSG EWEKKLDSFWQGRLNGQDPL+V+ AKEK+D
Sbjct: 435 YGMIETNEAKGFRHVRPERKGHEETGKSGSEWEKKLDSFWQGRLNGQDPLEVLAAKEKMD 494

Query: 302 AAATDFLDPHVRKIRDEKYGWKYGCGAKGCTKLFHASESVXXXXXXXXXXXXXXXTAKLR 361
           AAA + LDP+VRKIRDEKYGWKYGCGAKGCTKLFHA+E V               T+KLR
Sbjct: 495 AAAIEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELALEQTSKLR 554

Query: 362 EDLYFQNYMNDSNAPGGTPIMQQPQ 386
           EDLY QNYMND +APGG P+MQQPQ
Sbjct: 555 EDLYTQNYMNDPDAPGGKPVMQQPQ 579


>Medtr2g084355.1 | serrate RNA effector molecule-like protein,
           putative | HC | chr2:35534449-35532317 | 20130731
          Length = 248

 Score =  253 bits (645), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 124/197 (62%), Positives = 137/197 (69%), Gaps = 26/197 (13%)

Query: 190 TSDQSKNDDKAHSGSGGPIVIIRGLASVKGLEGVELLDTLITYLWRIHGIDYYGMVETNE 249
           +SD +K DDK+H+GS GP VIIRGL   KGLEGVELLDTLITYLWRIHG+DYYGM+ETNE
Sbjct: 7   SSDHNKTDDKSHNGSVGPTVIIRGLTYFKGLEGVELLDTLITYLWRIHGVDYYGMIETNE 66

Query: 250 AKGFRHVRPDGTGHEEASKSGPEWEKKLDSFWQGRLNGQDPLDVMTAKEKIDAAATDFLD 309
           AKGFRHVRP+ TGHEE                           VM AKE IDAAA + LD
Sbjct: 67  AKGFRHVRPERTGHEET--------------------------VMAAKENIDAAAIEVLD 100

Query: 310 PHVRKIRDEKYGWKYGCGAKGCTKLFHASESVXXXXXXXXXXXXXXXTAKLREDLYFQNY 369
           P VRKIRDEKYGWKY CGAKGCTKLFHA+E V               T+KLREDLY QNY
Sbjct: 101 PSVRKIRDEKYGWKYVCGAKGCTKLFHAAEVVYKHLKLKHLELALEQTSKLREDLYTQNY 160

Query: 370 MNDSNAPGGTPIMQQPQ 386
           +ND +APGG P+MQQPQ
Sbjct: 161 INDPDAPGGKPVMQQPQ 177